Cyprinus carpio (common carp): 109067281
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Entry
109067281 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccar03016
]
109067281
Enzymes [BR:
ccar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109067281
Transfer RNA biogenesis [BR:
ccar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109067281
Prokaryotic type
109067281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
DUF1428
Motif
Other DBs
NCBI-GeneID:
109067281
NCBI-ProteinID:
XP_042595832
Ensembl:
ENSCCRG00000051866
UniProt:
A0A9Q9X5X2
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All DBs
Position
A4:complement(9564357..9567525)
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AA seq
648 aa
AA seq
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MERLSLSCFISDHEGFHGTIXNSPQDFVVIEIDINGQLVNSSNVQEELTKSPSQPSQATK
RDDKLKQSKPDETDILNQDCFDLNIILGPDVNKELEQFTNKVRVGEQEHVELSLGTYPDK
HLRAVVHRAVRYNFPFLQTVTNQSEIRVREDPDFKELASLASEGEAEEFFRFIDAKVPGS
AYTFLPDDSKEHRTSVHHFVSRRFGKLVETKSFTDQQKTSITARLRERSKQPKKRTTADS
QEEVTLYTAFTLRKENLETLEAISYMAAVLGVLPSDFTYAGIKDKRAITYQAMVVKKISP
EWLLDKVSEFERRGMQISRVRPVSEPLKLGRLQGNHFDLVIRDLKPHEKHGLTGLQQLVK
EAVENVKNRGFVNYYGPQRFGSGSCVQADQVGLALLKEKMEASVKLFFTPEDGEDLQNKA
KRHFLLTGNAKESLALMPAYKARERLMLRALHRYGSGQEGCIRGWLSLPHSMRVFYLHSY
CSRVWNEAASYRLQKLGFKPVQGDLVWAGSEKGLKDTTEELNTPQVHVVTSEEEKDEVFF
SRKVILPMPGNSVKYPENLLGQWYQDRLAQDGLGPCRFRVTPLKLNVPGCYRPLLAKPQN
ISYSLQATEEQQGQSDETCTTSLSLTFDLDASCYATVCLGEIMKSNLS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctcagtctctcctgctttatatcagaccatgaaggtttccatgggactata
nnaaattcaccccaagactttgtggttattgagatagacataaatggacagcttgttaac
agttctaatgttcaagaagaacttacaaaaagtccttctcaaccaagtcaggctaccaaa
agggatgataaattaaagcagtctaaaccagatgaaactgacattttaaatcaggattgc
tttgatctaaatataatcttgggtccagatgtgaacaaagagttggaacaattcactaac
aaagtgagagtaggtgagcaagaacatgtggaactgtcattgggtacttatcctgataaa
cacctgagagctgttgtccatagagcagtacgatacaacttccccttcctccagactgtg
accaaccaatcagaaattcgggtcagagaggacccagacttcaaggagctcgccagttta
gcctctgagggagaagctgaggagttcttcaggttcatcgatgctaaagtacctggttct
gcgtacactttcctgccagatgatagcaaggagcaccgcacttcagttcaccattttgtt
agcaggcggtttggaaagcttgtggaaaccaagagcttcacagaccagcagaagacttcc
attacagcgagactaagagagagaagcaagcaacccaaaaagagaacgacagcagattct
caagaggaggtgacattatacacagctttcacactgagaaaggaaaacttggagactttg
gaggccatcagctatatggctgctgtactcggagtgcttccttctgattttacctacgca
ggaatcaaagacaagcgagccatcacctaccaggccatggtggtgaaaaagatctctcca
gagtggttgctggacaaagtctcagagtttgagcggaggggaatgcagatctctcgtgtc
cgtcctgtgtctgaaccgcttaaactcggcaggctccagggaaatcactttgatcttgtc
atcagagacctgaagcctcatgaaaaacatggacttacaggactgcagcagcttgtgaaa
gaggccgtggaaaatgtgaagaacagaggctttgtaaattattatggtccccaacggttt
ggaagtggatcatgtgtccaagcagaccaagtaggacttgcgctcttgaaggagaaaatg
gaggcttctgttaagctgttctttactccagaggatggtgaagatctccagaacaaggca
aaacgtcattttcttctcactgggaatgccaaggagagcttggctctcatgccagcttac
aaagccagagagcggcttatgctccgtgcgcttcacagatacggcagcggacaggagggt
tgcatacgtggctggctcagtttaccccacagcatgagggtcttctacctccactcttac
tgtagcagagtgtggaacgaagcagccagctaccggctccagaaactgggctttaagcct
gtccagggagatctggtttgggctggatctgaaaagggactcaaagacaccacagaggaa
ctgaacactccacaggtccatgttgtgacctctgaggaggagaaggatgaagtttttttc
agtaggaaggtaattcttccaatgccaggaaatagtgtcaaataccctgaaaacttgttg
ggccagtggtatcaagaccgactggctcaggatggcttggggccatgccgttttagagtg
actccccttaaactcaatgtcccgggatgttatcgccccctactcgcaaagccacagaat
atcagttacagcttgcaagccacagaggagcagcagggtcagtcagacgagacttgcaca
accagtctatcactaacctttgacctggatgcatcctgctacgctactgtgtgtctcgga
gagataatgaagagtaatctttcatag
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