Cyprinus carpio (common carp): 109067308
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Entry
109067308 CDS
T05134
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109067308 (ptbp2a)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109067308 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
109067308
NCBI-ProteinID:
XP_042607497
UniProt:
A0A9Q9XT27
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All DBs
Position
B24:complement(18357462..18369508)
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AA seq
527 aa
AA seq
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MDGIGDVAVGVKRGSDELLSGSMYNSPSSGLSSISDTTSNGSDSKKLRVEDRVGDAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSMPVYIQYSNHKELKTDNSNQSGGTLASGSNSSDGCGTPSSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPNSAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPPALDPSVVAALGKDSGSLLGKIPGALSPLS
AAAAAAAAAGRVALSGHSGASGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKD
SALIQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPL
HRFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKAFKFFQDHKMALI
QMTTIEEAIQCLIDLHNYNMGNNHHLKVSFQINHLKQPERSCSQLLF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgacgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcagcatgtataacagccccagttctgggctgagcagtataagcgatacgacatccaat
ggcagtgacagcaaaaaacttcgcgttgaagaccgagtcggcgatgccccaccatcccgt
gttcttcacattagaaagttacccaacgatgtctcggaaacagagatcattgccctgggg
cttccattcggaaaggtcaccaatatcctcacactgaaaggcaaaaaccaggcgtttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactcagctgtgacgcca
cacgtccgtagtatgccggtctacatacagtactccaatcacaaagaactcaagactgac
aattcaaaccagtcaggtgggactctcgcatcagggtccaattctagcgatggttgtggt
acgccctccagtccagtgctgaggataatcattgataacatgttttaccccgtcaccctg
gacgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagtacaacgatccaaacagtgcacagcaagct
aaagtggctctagatggtcagaatatatacaacgcctgttgtacccttcgcatagactac
tcaaaacttgtcaacctgaatgtaaaatacaataacgacaagagcagggactatactagg
ccagagcttcctgctggagatgggcagccgcctgctctggacccctctgtggttgctgcc
ctgggtaaagattccggttccctgctcggtaagatcccaggtgctctgagcccgttgagc
gcggcggctgctgccgctgctgcagctggaagagttgctctgtctgggcactcgggagcc
agtggagtgctgctcgttagcaatctaaatgaagagatggttacgccccacagtctgttt
accctcttcggggtttatggggatgtgcagcgtgtgaagattctttttaataagaaagac
agcgcactgatacagatggccgatatgaaccaggctcagcttgcaatgagccatctgaac
ggtcagaagatgtattcaaagatcattcgcgttacgatgtcgaagcaccaaaccgttcag
ttacctagggacggtttagatgaccagggcctcacgaaagacttcacaaactcaccactg
catcgtttcaaaaagccagggtccaagaacttccagaacattttccctccttctgccacg
ctgcatctgtcaaacatcccgcaagacataactgaagaagacctcagagtcctgttctcc
aactccggtggcactgtgaaagctttcaagttttttcaagatcataaaatggccctaatt
cagatgacaaccatcgaggaagctattcaatgcctcatcgacctccacaattacaacatg
ggtaataaccaccacctgaaggtctccttccaaatcaaccatctaaagcaacccgagagg
tcttgctcccaactgcttttctag
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