Cyprinus carpio (common carp): 109067338
Help
Entry
109067338 CDS
T05134
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109067338
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109067338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Nup35_RRM
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
109067338
NCBI-ProteinID:
XP_018939845
UniProt:
A0A8C2AFM9
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGSMYNSPSSGLSSISDTTSNGSDSKKLRVEDRVGVAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HIRSVPVYIQYSNHKELKTDNSNQSGGTLTSGSNSSDGGGTASSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPTNAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDHTMVAALGKDSTSLLGKIPGALSPLSA
AAAAAAAAGRVALSGHSGASGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDS
ALIQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLH
RFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKGFKFFQDHKMALIQ
MTTIEEAIQCLIDLHNYNTGNNHHLKVSFSKSTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgacgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcagcatgtataacagccccagttctgggctgagcagtataagcgatacgacatccaac
ggtagtgacagcaaaaaacttcgagttgaagacagagttggcgttgccccaccatcccgc
gttcttcacattagaaagttacccaacgatgtctcagaaacagagatcattgcccttggg
cttcctttcggaaaggtcaccaatatcctcacactgaaaggaaaaaaccaggcgtttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactcagctgtgacgcct
cacatcagaagcgtgccggtctacatacagtactcaaatcacaaagaactgaagaccgac
aattcaaaccagtcaggtgggactctcacatcagggtcaaactctagcgatggtggaggt
acagcctccagtccagtgctgaggataatcattgataacatgttttaccccgtcaccctg
gatgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagtacaacgatccgaccaatgcacagcaagct
aaagtggctctagatggtcagaacatatacaacgcctgctgtacccttcgcatagactac
tcaaaactcgtcaacctgaatgtaaaatacaataacgataaaagcagggactacacgagg
ccggagcttcctgctggggatgggcagcctgctctggatcacactatggttgctgcactg
ggtaaagattccacttccctgcttggtaagatcccaggtgctctgagcccgttgagtgcg
gctgctgctgccgctgctgcagctggaagagtcgctctgtccgggcactcgggggctagc
ggagtgctgctcgttagcaatctaaacgaagagatggttacgccccacagtctgtttacc
ctcttcggggtttatggggacgtgcagcgtgtgaagattctttttaataagaaagacagc
gcactgatacagatggctgatatgaaccaggctcagcttgcgatgagccatctaaacggt
cagaagatgtattcaaagatcattcgcgttacgatgtcgaagcaccaaactgttcagtta
ccgagggacggtttagatgaccagggtctcaccaaagacttcacaaactcaccactgcat
cgtttcaaaaagcccggctccaagaacttccagaacattttccctccttctgccacgctg
catctgtcaaacatcccgcaagacataactgaagaagacctcagagtcttgttctccaac
tccggtggcactgtgaaaggttttaagtttttccaagatcataaaatggctctaattcag
atgacaacaatcgaggaagctattcaatgcctcatcgacctccacaattacaacacgggt
aataaccaccacctgaaggtctccttctccaaatcaaccatctaa
DBGET
integrated database retrieval system
