Cyprinus carpio (common carp): 109067352
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Entry
109067352 CDS
T05134
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109067352
Pattern recognition receptors [BR:
ccar04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109067352
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_EndoS
LRR_NXF1-5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
109067352
NCBI-ProteinID:
XP_018939858
UniProt:
A0A9Q9V555
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Position
A4:23277649..23282644
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AA seq
934 aa
AA seq
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MSVREHVLCFNKYCSLTSCLLYCCIFINLVNGYSVKNCTVRGSLKYAQNINVFCDKRSLH
FVPDNIPDKATYLDISNNVIQKIIKEYFSQLSNLKSLNALHNKIREVEEGAFSSLVALQE
LNLAYNKLTNILGGMFQNLRNLTVLHLNENLITNINFSAFSPLISLRKVNLSRNHLKKIG
KVQPLFLLPQLQEVHIGSNGFTSFQTSELSNISLRLQVLDLFQNPLKVFSITADIFPHLD
NLVLAFITENMTWDVQDKRYLQSVKHLNLSGIQLPLEKITALLQTFNSSLVSLRLHFLGD
IKVRALIRDVCLISPLKFLGLQWNNITAISKDEMQFCTQLTELDLSNNKLYSVPAVVSSL
PGLRFLDLTFNNIKNISSVDFANLTQLRTLQIYSNVISFIEEFAFKDLKNIKTLMIGSNR
LSLNRYFKKDLQKLEILDLANNKLDSVRRGHFDSLNSLKNLSLPDNQISFIEAGSFSGLT
NLIFLNLQSNKLSQSSIKASVFSRLPNLKTLLLNNNYISYDSQEPLEQPPFQYLRKLKTL
NIFSQAHKGMLYLPSNLFMGLWNLEELQAENLNINSLHPDTFTHTPYLWVLDLSRNDFIL
LTTKIFLPLQVLKTLHLSKVGLQSLDFLINANLSKLHLLHVSKNALSVINETVIQSFPTL
IYLDLRGNYLSCDCTNAWFINWTISSNDTEVESAYELTCNYPDKLKGHKLLDLDIGSCNV
DVGFFCFISTATLVSVTLLGTFLFHFLKWQVIYAYYLFLALLHDNKQQRKPNGLQYDAFI
SYNVHDELWVMRELLPHLEGEQGWKLCLHHRDFEPGKPIMDNIVDGIYSSRKTICVISRH
YLESEWCSREIQIASFRLFDEKKDVLILVFLENIPSHQLSPYYRMKKLIQRKTYLSWPKP
GEDTRVFWQKLRVALETKGNSELEPPIGWDLGVN
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagagaacatgttttgtgcttcaataaatactgtagtttgacctcatgcctg
ctttactgctgtattttcattaatcttgtaaatggatactcagtaaagaactgcactgtc
agagggtctttgaaatatgcacaaaacataaatgtgttttgtgataagaggtccctgcat
ttcgtaccagataatataccggacaaagccacatatttggacatttctaacaatgtcata
cagaagataatcaaggagtatttctctcaactgtctaatcttaaaagtcttaatgcacta
cacaataagatccgggaagtggaggaaggagcattcagcagtttggtggctttgcaggag
ttaaatctggcctacaacaaactgacaaatatcctgggaggaatgtttcagaatctgcga
aatctcactgtcttacatctaaatgaaaacttgatcacaaatatcaacttctctgcattt
tcacccctgatcagtttaagaaaagtaaatctgtccagaaatcatctgaagaaaattggc
aaagttcagccgctctttttattaccacaattacaggaagtgcacattgggagtaatggc
ttcacctcttttcagacctcggagctgtccaacatatctttgagactgcaagtcctggat
ttatttcaaaatcctttgaaagtgttcagtatcactgcagatattttccctcaccttgat
aatttggtcttggcttttattactgaaaacatgacatgggatgtgcaggacaaaagatat
ctacaaagtgtgaaacatctcaatttaagtggaatacaattgcccctggagaagatcaca
gctcttctacaaaccttcaactcttctttggtcagcctgaggctgcactttctgggggat
ataaaagtgagagctttgataagggacgtctgtctgatttcaccgttgaaatttctaggc
ttgcagtggaacaacattacagccatatcaaaagacgagatgcagttctgcacacagtta
actgagcttgatctctccaataacaaactatacagtgtccctgctgtcgtcagcagccta
ccaggtcttcgttttttggacctcaccttcaacaatataaagaacattagtagtgtcgat
tttgctaacttaacccaattacggacccttcagatttatagcaatgtaatatcttttatt
gaggaatttgcttttaaagatctgaaaaacataaaaactctaatgattggatctaacaga
ctctctctcaacagatattttaaaaaagatcttcaaaaacttgagattttggatctagca
aataacaagctggactctgtccgtaggggacattttgactccttaaattcactgaagaat
ttgtctctaccagacaatcaaatatcatttatcgaagcggggtccttcagtggactgaca
aatttaattttcctgaatttgcaatcaaacaaactttctcagagttcaataaaagcttcc
gtgttctccagactcccaaacctgaaaacacttctgttgaacaataactatatttcatat
gacagtcaagagcctcttgaacaaccaccctttcaatatctgagaaagctgaagactctg
aacatttttagccaagctcataaaggaatgctttatttaccttcaaaccttttcatggga
ctgtggaatttggaagaacttcaagcagagaatctaaatataaattctttacacccagat
acatttactcatactccttatctgtgggtactggatctcagcagaaatgattttatttta
ctcacaacaaaaatatttctgccactccaggttctcaagacactccacctgtctaaagtt
ggcttgcaatctttggactttctcattaatgcaaacctcagtaaactacatctgttgcat
gtaagcaagaatgccttatcagtcattaatgagacagtgatccagtcttttccaacactg
atttaccttgatctacgaggaaattatctctcatgtgactgtaccaatgcctggttcatc
aactggaccattagtagcaatgacacagaagttgaaagtgcttatgaactcacatgcaat
tacccagacaaactcaaaggacataaactcttggatcttgatataggttcatgtaatgta
gatgttgggtttttctgtttcatttccactgccacactagtctctgtgacacttcttggt
acttttctctttcacttcctcaaatggcaggttatttatgcttactaccttttccttgct
ttactccatgataacaaacagcaaagaaagcccaatggtttgcagtatgatgcttttatt
tcctataacgttcatgatgaattgtgggtaatgagggaactgttacctcatttggaaggc
gagcaaggctggaagttgtgtctgcatcacagggactttgaaccaggcaaacctatcatg
gataatattgttgatggcatttatagtagtcgaaaaaccatctgtgttattagccgtcac
tacctggaaagtgagtggtgttccagagagatccaaattgctagtttccgtctctttgat
gagaaaaaagatgttctcatcctggtattcctggagaatattccaagtcatcaactgtct
ccgtactatagaatgaagaaactaatccagaggaagacatatctcagctggcctaaacca
ggagaggacaccagggtcttctggcagaaactgagagtagctctggaaaccaaaggcaac
tcagaattggagcctcccattggctgggatttaggggtcaactaa
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