KEGG   Cyprinus carpio (common carp): 109067379
Entry
109067379         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109067379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109067379
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109067379
Spliceosome [BR:ccar03041]
 Complex B
  Other components
   Prp19 complex
    109067379
 Complex C
   Prp19-CDC5 complex
    109067379
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109067379
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072
Other DBs
NCBI-GeneID: 109067379
NCBI-ProteinID: XP_042611519
Ensembl: ENSCCRG00000020683
LinkDB
Position
Unknown
AA seq 803 aa
MEESLTGRRSRPESDDEILKSGCNEHGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLPKLMPTQWRTIAPIIGRTRPAQCLEHYEYLLDKAAQRENEDDVGDD
PRKLKPGEIDPNPETKPARPDPLNMCADELEMLSEARARLANTQGKKAKRKAREKQLEEA
RRLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMELYDPLEPNF
KRLRQQHLDGELRNEKEDHERKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPA
PQISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSVYNVTNNSMALRTPKTPAAQ
DKILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHG
ADGMTPHSGMTPKPSVGVTPLRTPLRDKLNINTEEGGMDYSDPSFAKHLQKESREQLRQG
LMSLPVPKNDFEIVLPENAEKELEEAEVDESFVEDAAEIELRKQAARDAEREKELRQRHT
AVQRDLPRPSEVNETILRPHNVEPPLTDLQQAEEIIKKEMITMIHFDCLHQPFSDALAKK
GKGMGSSSNNTEHIAFLEKNPYEKVSEEELKKAGELLAQEMEVVKHGMGHGDLSIEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESMEKKLEINRGHMTTEAKRAAKMEKKMKI
LLGGYQSRAMGLLKQLSEVWDQVEQAHVELHTFQELKKQEDHAIPRRQEALREDVQRQQD
REKELQQRFADLLLEKQTLSQKF
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggaggagagcctgacaggacgccggagcagacccgaatctgatgatgagattctcaaa
agcggctgtaatgaacatggcaaaaatcagtggtctcgaatcgcgtccctgctgcaccgc
aaatcagccaaacagtgcaaagccagatggtacgagtggctggaccccagcatcaagaaa
acagaatggtcacgtgaggaagaggagaaacttcttcacttgccaaaactgatgcccact
cagtggaggacgatcgcccccatcatcggacggacacggcccgctcagtgtctggagcat
tacgagtatctgctagataaagccgcccagagagagaacgaagacgatgtgggcgatgac
cctcgcaagcttaaaccgggagagatcgacccgaaccctgagaccaaaccagccagaccc
gacccattaaacatgtgtgcagatgagctggagatgctgtcagaagccagagcccgattg
gccaacacacagggcaagaaggcgaagcggaaagccagagagaaacagctggaggaagca
cgtcgtctggcagcgcttcagaagcgcagggagctgcgagcggcaggcatcgacatccag
aagaagcgcaagaagaagagaggtgtggactataatgctgagatcccgtttgagaagaaa
cccgcgcagggcttctatgatacgtccatggagctgtatgatcctttggaaccgaacttc
aaacgactgcgccagcagcatctggacggggaactcaggaatgagaaggaggatcatgaa
cgaaagaaggacagacagaagatcaagaagaagaaggagtccgatctgccctcggccatc
ctgcagaccagcggagtgtcagagttcaccaagaagagaagcaaactggtgcttccggca
ccacagatctctgacgctgagctggaggaggttgtcaaactgggtcaggccagcgaaatc
gcccggcagaccgccgaggagtctgggatcaccaactcggcctctagcgctcttctgtcc
gtatacaacgtgaccaataactccatggccctgcgcacacccaaaactccagcagcacag
gacaagatcctgcaggaagcccagaacctgatggcacttaccaacgtggacacgcctctt
aagggagggctgaacaccccgctccacgagagcgacttctctggtgtcacaccacagaga
caggtggtccagacgcccaacacggtgctgtccacacccttcagaacgcccagccacgga
gccgacggcatgacccctcacagtgggatgactcctaaaccctcagtgggggtgaccccg
ctcaggaccccgctgcgggacaagctcaacatcaacacagaggagggcggcatggactac
agcgacccgtcatttgccaaacacttgcaaaaggagtcccgcgagcagctccgacagggc
ttgatgtctcttccggtgcccaaaaatgactttgagattgttcttcctgaaaacgctgag
aaagagctggaggaagccgaggtggacgagagtttcgtggaggatgcggccgagatagag
ctgcgcaaacaggccgccagagacgccgagagagagaaggagctgcgtcagagacacacg
gcagttcagagagatttaccaagaccttcagaggtcaacgagacgatcctccggcctcat
aatgtggagccgccgctgacggacctgcagcaggccgaagaaatcattaagaaagaaatg
atcaccatgatccacttcgactgtctgcatcagcccttcagcgacgcgctggccaagaag
gggaaaggaatggggtccagctccaacaacacagagcacatcgctttcctggagaaaaac
ccctacgaaaaggtctccgaggaagagctcaaaaaggccggagagctgctggctcaggag
atggaggtggtgaagcatgggatgggtcatggagatctgtctatagaggcgtataaccag
gtgtgggaggagtgttacagtcaggtcctgtacctgcccggacagagccgctacacccga
gcaaatctggccagcaagaaggacagaatcgagtctatggagaagaaactggagatcaac
aggggtcacatgaccacagaggccaagcgtgcggcgaagatggagaagaagatgaagatc
ctgctgggcggctatcagtcgcgggccatgggtctgctcaaacagctcagtgaagtctgg
gatcaggtggaacaggcccacgtggagctccacaccttccaggagctgaagaaacaggaa
gaccacgccattccacgcagacaagaggccctgagagaggatgtccagagacagcaggac
agagaaaaagagctgcagcagagattcgctgacctgctgctggagaaacagacgctctcg
cagaagttctga

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