Cyprinus carpio (common carp): 109067437
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Entry
109067437 CDS
T05134
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03250
Viral life cycle - HIV-1
ccar03272
Virion - Hepatitis viruses
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109067437
03272 Virion - Hepatitis viruses
109067437
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109067437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109067437
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109067437
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
109067437
Exosome [BR:
ccar04147
]
Exosomal proteins
Proteins found in most exosomes
109067437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
109067437
NCBI-ProteinID:
XP_018939919
Ensembl:
ENSCCRG00000041357
UniProt:
A0A9Q9ZEQ1
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All DBs
Position
A19:22027288..22038657
Genome browser
AA seq
873 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTATYPPGEEQTEYLRAVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAIEPKFPFPELCLTFTWKDAFDKGSLFGGSVKLALASVGYEKTCV
LFNVGALASQIASEQNLDNDEGLKTAAKFYQLASGAFAHIKDTVLSALNREPTMDISPET
VGTLSQIMLSQAQEVFVLKATADKMKDAIVAKLANQAADYYGDAFKQCQYKENLPKYFYF
QEVLPVLAAKHCMMQATAELRQSALANQKKKFGEEIARLQHATELVKTAASRYDEYVNVK
DLSDKINRALTAAKKDNDFIYHDRVPEVKDLEPIGKASLVKATAVQTPLSQKYSDLFEKM
VPMAVQQSVSAANSRKADTVNRLIGSMREATNLCNGVLASLNLPAALEDLSGEAVPQSIL
EKSRAVVQQGGLQSIEQLIKDLPELLQRNREILDESFKMLDDEEATDNELRAKFNQRWNR
TPSGDLYKPLRAEGNNFRNVLDKAVQADQVVKERYTAHCEMIALLCKPENELSAAIPSAN
PAKTLQGSEVVNVLRAQLAQLDEVKREREVLEGEVKSVTFDMTTKFLTALAQDGAINEEA
LTASELETRYGSHTQRVQQNLRRQEELLSQIQVSHQEFSALKQSNSEANNREEVLKKLAS
AHDSYIEISSNTKEGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIAREPS
APSFNVPSYQSNTPAPAPGGPTPAPRTVFTQQQPQAKPQPPARPPPPNITPQAASTSAPI
STPVPPGSTNPPPVAPPTGPSQAQGPPYPTYQGYPGYYQMPVTYNPYAYGQFNMPYMPYQ
AQGQAGYPGGPPAQQPYPYPQQPPQQQPYYPQQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttctgtcccgttgaagaagtcctcagaggtcgacttagtgaaaccg
ttgtcgaaatttgtcacggccacgtatcctcccggtgaggagcagacggagtatctccgt
gcggtggaagagctcaataagctgcgtaaaagtgcacttgggaggccgctggacaagcac
gagagctcgctggagatcctgctgcgatattatgatcagctctgtgcaattgaacccaaa
tttccttttccagagttatgtctgacatttacatggaaagatgcttttgataaaggatct
ctttttggaggctcagtcaaacttgcattggcaagtgtgggctatgagaagacgtgtgtg
ttgtttaatgtgggcgcgctggccagtcagattgcctctgagcagaatctcgacaatgac
gagggactgaagaccgccgccaagttctaccagctggcgagtggtgcatttgctcatata
aaggatacagtgctttctgcactgaatagagagcccaccatggacatctcccccgagaca
gtgggcacgctcagtcagatcatgctcagccaggcacaggaggtcttcgttctcaaagcc
actgctgataagatgaaggacgccattgtcgcaaaacttgccaaccaggcggcagattac
tacggtgatgcttttaagcaatgtcaatacaaagagaatctgcctaagtatttttatttc
caggaagtgcttcctgtcctcgctgccaagcactgtatgatgcaggccaccgcagagctg
cgccagtcagccttggccaatcagaagaaaaaatttggagaggagatcgcacggctgcag
cacgccacggagctggtgaagaccgcggcttctcgttacgatgagtatgttaacgtaaag
gatctgtcagataagatcaaccgcgccctcacagctgcaaagaaagacaatgacttcatt
taccatgaccgtgtgccagaggttaaagacctggagcccattggcaaagcatctctggtc
aaagcaactgcagttcagacaccactcagccagaagtactcagatctgtttgagaagatg
gtgccgatggcagtgcagcagtcagtgagtgcagccaattccaggaaggctgacacggtt
aacagactgattggcagcatgagggaagcaacaaatctctgcaacggggtgttggcatct
ttgaacctaccggccgcactagaagatctgtcaggagaagcagttcctcagtccatcctc
gagaagagccgtgctgttgttcagcagggtggcctacagagcattgaacagctcattaaa
gatctccctgaactactgcagaggaaccgtgagatcctggatgagtcctttaagatgtta
gatgatgaggaagcaacagacaatgaactccgagccaaattcaatcagcgctggaacaga
actccctctggagatctgtataaaccactcagagcagagggaaataattttcgcaatgta
ctggacaaggcagtgcaggctgatcaggtggtgaaagagcgttacactgcacattgtgag
atgattgctttgctctgcaagccagagaatgagctcagtgccgccataccgtctgccaac
cctgccaagactctgcagggcagtgaggtggtaaacgtgctgagagcgcagctggcacaa
ctggatgaggtgaagagggaacgggaagttctggagggagaggtgaagtctgtgaccttt
gatatgacgacaaagttccttactgcactggctcaagatggcgccattaacgaagaggct
ctgaccgccagtgagctggagacacgttacggctctcacacacaacgtgttcagcagaat
ctacgcagacaggaggaactgctgtcacagattcaggtttctcaccaggagttttcagca
ctcaagcagtccaactctgaggctaataacagagaggaggtcttgaagaaactcgcctca
gcccatgatagctacatagagatcagctccaatactaaagagggcactaaattctacaat
gatctgacagaaatcctgttaaagtttcaaaataagtgcagcgacattgtctttgctcgc
aagactgagagggatgaactgctcaaggagctgcagcagagcattgctcgtgagccgagc
gctccttcattcaacgtcccatcataccagtccaacactcctgcacctgccccaggaggc
ccgacccctgcgcccaggacagtgtttacccagcagcagcctcaggctaagccccagccg
ccagcgagaccaccaccccctaacatcactcctcaggcggccagtacttctgctccaatc
agtactccagtgcctcccggcagcactaatccaccacctgttgcgccacccactggcccc
tcacaggctcaaggaccaccctacccaacttatcaaggctacccagggtattaccagatg
ccagtgacctataacccctatgcatatgggcagtttaatatgccctacatgccctatcaa
gcccaggggcaggctggataccccggaggccctcctgcacagcagccctacccctatcct
caacaaccaccacagcaacagccctactacccccaacagtag
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