Cyprinus carpio (common carp): 109067632
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Entry
109067632 CDS
T05134
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109067632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109067632
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109067632
REST complex
109067632
Heterochromatin formation proteins
Other heterochromatin formation proteins
109067632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
109067632
NCBI-ProteinID:
XP_042584103
Ensembl:
ENSCCRG00000019911
UniProt:
A0A9Q9WIM6
LinkDB
All DBs
Position
B7:complement(28091490..28129624)
Genome browser
AA seq
1265 aa
AA seq
DB search
MKRCLEDQDTVIGSQRQLPGGVDSFQHRVLSSASTLYETAPDNMQPSSSLQYSVSQTYQL
SMAQSSGGHGHTSSSAVHSGPHHHGPAVQPVGQGHSHATPTPAPAPAPTLGQQQFQRLKV
EDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFN
TFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNLPITQPAQHQTQTAAPTSTAALV
IPSQPTPAKISKPMQSPALTPTSQPNPSIPSYASPRSPSVQSHTPISSSTAGSTPLQNNQ
PVEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNYTPTLTEQQVYA
QVAQLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRIDHGVTVKRPQPNNKQRFN
QNGCQVRRHPGPPTTPPVKKKQKFIGKDHSMAEASKLGIGAESLFFEKVRKALRSSEAYD
NFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYRECAHIESFPKERATEG
IAMEIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSK
KTQYEEHIYRCEDERFELDVVLETNLATIRVLEAVQKRLSRMSAEEQAKFRLDNTIGGSS
EVIHRKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQN
EKYYLKSLDHQGINFKQNDTKVFRSKMLLNEIETLYDERQEQASEDNAAPPSGPHITIMY
EDSQILEDTAALIIHHVKRQSGIHKDDKYKIKQIIYHFIPDMLFARRGELSDVEEEEEEE
TEPDEDGTKKHNGTTSTKSKLLFSHTAATQQKLSNCDDAYNLFYVNNNWYIFLRLHQILC
SRLLRIYAQAEKQIEEDAREREWERNMLGLKREKNDSPAIQLRLKEPMDIDVEDYYSAFL
EMVRNLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDL
YLSEFANKATGGSLSTQASRGIAESSYQRKAEQLMSDENCFKLLFQKSKGTVQLAVELLD
TEEENSDGPVDTERWPDYVERYLNTSSASPELREHLSQKPVFLPRNLRRVRKCQRGQEMQ
VRETKETAKKSSEGGEDSKMECMFKLNSYKMVYVFKSEDYMYRRTAQLRAHQSHQRVSTR
LHQRFQLWLDRWRKEHVTSDMAAASYKWLMGESLEGLLPCRTVCEPKILHFQNINKYKVT
YSTTL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtgcttggaggatcaggacacagtgatcggctctcagcggcagctccccggg
ggtgtggacagctttcagcaccgggtcctcagctctgcctccaccctatacgagactgca
ccagacaacatgcagccatcgtccagcctgcagtactccgtctcacagacctatcagttg
tcaatggcccaaagttctggtggacatggacataccagcagttcagctgtacacagtggg
cctcatcatcatgggccagctgtccagcctgtgggccagggtcactctcatgctacccct
acccctgcccctgcccctgccccaacactgggtcagcagcagtttcaaaggctcaaggtt
gaagatgctctttcctatttggatcaagttaaacttcagtttggcaatcagccacaggtc
tacaatgacttcctggatatcatgaaggagttcaagtctcaaagcattgatacaccaggt
gtgatcagcagagtctcccagctcttcaagggccatccagacctcatcatgggcttcaac
accttcctgcctcctggctacaagattgaggttcagaccaatgatctggttaatgtgacc
actcccggccagatccaccacatcaccccacatggtatctctgttcaaaaccttcccata
acccagccagcacagcaccagacccaaacagcagctcccaccagcactgcagccttggtc
atccctagccagccaacccctgccaagatcagcaagccaatgcagtctcctgcacttacc
ccaaccagccagcctaatccgtccattccctcgtatgcctccccgcgctcgccctcggtc
cagtcccacactcccatcagcagcagcactgccggttcaaccccgctgcagaacaaccag
cctgtggagttcaaccacgctataaactacgtgaacaaaatcaagaaccgctttcagggc
cagccagaggtctacaaatccttcttggaaattctgcacacataccagaaggagcagcgt
aatgctaaggaggcagggggaaactacacacccactctcacagagcagcaggtctatgct
caggtggcccagctcttcaagaaccaagaggaccttctttcagaatttggccagttcctg
ccagatgctaacagttcagtgttattgagtaagactacagctgagaaggctgaatctgtg
cgtattgatcatggggtgaccgtaaagagacctcaaccgaacaataagcagaggtttaat
cagaatggctgtcaagtccgcagacacccagggccgcccactacgccccctgttaagaaa
aagcaaaaatttataggaaaagaccattcgatggcagaagccagtaaacttggaattggt
gctgaatctctcttttttgaaaaggtgcggaaagctctgcggagttcagaggcttacgac
aatttcttacgctgtttggtcatcttcaatcaagaagtgatctcacgggctgaacttgtg
cagctagtcttaccatttttggggaaattccctgagctttttacatggttcaagaacttc
ctcggctacagagagtgtgcccatattgagagctttcccaaagagcgagccactgaaggc
attgcaatggaaattgattatgcctcctgcaaaagattgggctccagttacagagcactt
cccaagagcttccagcagcctcgatgtacaggcaggactccactgtgcaaagaggtgttg
aatgatacgtgggtgtcatttccatcctggtctgaggactcaacctttgtcagctccaag
aagacccagtatgaagagcatatatatagatgtgaagatgagcgctttgagcttgatgtg
gttctggagacaaacctcgctaccatccgtgttctggaggctgttcaaaagaggctctcg
cgaatgtcagctgaagaacaggccaagttccggctggacaacaccatcggaggctcctct
gaggtcatccatcgtaaagctattcagaggatatatggtgataaagctccagacatcata
gatgggcttaagacgaaccctgctgtctctgtacctattgtactcaaaaggctgaaaact
aaagaagaagagtggcgagaggctcagcgtggcttcaataagatctggagggaacagaat
gagaagtattacctgaagtctttagatcaccaaggtattaacttcaaacagaacgacaca
aaggtgtttcgctccaagatgcttctcaatgaaatcgagactctttatgatgagcggcaa
gagcaggcttcagaagacaatgcggcccctccctcaggccctcacatcaccatcatgtat
gaggacagccagatcctggaagacacggctgctctcatcatccaccacgtcaagaggcag
tccggcatccacaaagacgacaagtacaaaatcaaacagatcatatatcatttcatcccc
gacatgctgtttgcccgacgcggtgagctttctgatgtggaggaggaggaagaagaggag
accgaaccagatgaagacgggactaaaaagcacaatgggacgacgtcaacaaagtctaag
ctcctcttcagccatacagcagctacccagcagaagctgagtaactgtgacgatgcctac
aacctcttctatgtcaacaataactggtacatctttctgcggctgcatcagatcctgtgc
tcccgactgctacggatctacgcccaggcggaaaaacagatagaggaagatgccagagag
agagagtgggaaagaaacatgttgggactgaaaagagagaagaacgacagcccggccatc
cagctgcgtttgaaagaacccatggacatcgatgttgaagactactactctgccttctta
gagatggtgcgaaacctcttggatggcaacatggagacatctcaatacgaggaccagctg
agggaaatgtttaccatccatgcctacattgccttcaccatggacaaactcatccagagt
atagtgagacagctccagcatatagtaagcgatgagatctgtgtacaggtgactgatctt
taccttagcgagtttgccaacaaagccaccggtgggtccctgtccacccaagcttctaga
ggaattgccgaatcatcctaccagcgtaaagctgagcagctgatgtctgacgagaactgt
tttaagttattgttccagaagtctaaagggactgtgcagctggccgtggagctgttggac
acagaggaggagaactcagatggacctgtggatactgagcgctggcccgactatgtggag
cgatatctgaacaccagctcggcctctccagagctgcgagagcacctctcccagaagcct
gtgtttctacccaggaacctaaggcgagtccggaagtgccagagaggtcaggagatgcag
gtgagagagaccaaagaaacagctaagaaatcctcagagggcggcgaggactcaaaaatg
gagtgcatgtttaagctcaactcctacaagatggtgtacgtcttcaagtcggaggactac
atgtaccgacgcactgcacagctgagagcgcatcagtcacaccagagagtaagcactcgt
ctgcatcagcgctttcagttgtggctggacaggtggcggaaagagcatgtgaccagcgac
atggcggccgcctcttacaagtggctgatgggcgagagcctggaggggctactgccctgc
agaaccgtctgtgagcccaagatcctccacttccagaacatcaacaaatacaaagtcacc
tacagcactacgttgtaa
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integrated database retrieval system
