Cyprinus carpio (common carp): 109067650
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Entry
109067650 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109067650
Cilium and associated proteins [BR:
ccar03037
]
Motile cilia and associated proteins
Sperm associated proteins
109067650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
NAD-GH
TPR_10
Motif
Other DBs
NCBI-GeneID:
109067650
NCBI-ProteinID:
XP_042592511
UniProt:
A0A9Q9X0U1
LinkDB
All DBs
Position
A4:12007166..12030215
Genome browser
AA seq
2613 aa
AA seq
DB search
MSIATDAKHSSSRLARAVWTMDPAPASYYGPLDKNNPVLLAFQSDLKEFKAHIKKLSSSP
NYDYRSYSRGSIKLFETWRNKYKSRLPASYFEEHLLQTADFLLYSKLHRLALWQGYRLYL
QQFCTLSLESIRDVEHFRQSFFSDGFDSKRARLTFLALQGECQCIFYLEKERNALPDQSA
VQNLRAEHPGICAHSHCIFWILDFFVSFVQVLEYLLWACTCLETSVPLLTANFLPWRATL
YCAVCECYFHECASVQAEVFARRALGKISELAKLEERWLPSAGSQVSLETQQAFKEATIK
TPWPRTPTERILMEMFEGNAARASGSAGSSRGTSSVRPLQTGMPEEFEVQDVVLELISAG
TSLLSGTLFHPLCLCVLVILTHTSVESLPPSINAVTSTSSLFDTAVAGKSKIAVDAAVKF
VKQVFRYEQWSICSNMEGRTFRKYELELKILEAVEHLISNQKVKFIVKDAAFDGQADEMG
LMEFKKSNANCVQAWRQKQIDLQKCRRPLVGIRRKNQMSHETKKILEEAIMLMEKAELEE
RRLVSCAFPSENNLEMAEKRQPPPAPIVLSRSNRSMTFKPAPYALEEEVCWYCIYGREAE
GVNLKVRLKDCFLCGTGDMTPARGGHLLHVDGLEPDKKYIFAVACFXCKGQNGGWCTIGE
TTRPLLASLPLPLLTTWAHIAQVAYQTGVYSLAKRACNELWSHFTLPPSPEAEQEGCLEG
LAQTRLHPKTPAAFPLLSYSSCFFCSTIFIQTDIHIQEGTLFCDSLCEXGPLIWGQEARL
AECERMLVAIDLALHLNDSGGALQAVVSCYGLLTPLIFNQIAPSEPGIEVLWKCFTVLLE
IPEVLKQKRPVATTESLEHMVACMTYSLAKSLSSTLENHMASSVFDLGMRLLQEITEPPQ
QPAKKTSSVELDGKKTASVHDEGPSKQLKVLEAIVMKTMHSETLGNRDVTSCNKTGSDGC
ELTGEEDPVVLYMVIENSPLQHDFKEVMKFKQKSCFLEFVVHLLKKALLEDELDLVLQWE
QSILDWLSRRDEALFGLKKHSSLPGEEFKDFTTSVIEYNTKKQKGGTFWDGRKLLQKKLL
IAFKSQNSEREVSAVDVLLSQLATLIRRHQRCWKLRQIFSHLSQSFFSLAHCGMLIMWKN
VPQHITPPELTLPNPKAVPRPRSRAHKKDVEHKMKWDFRHTTRHTRDSKAVSAHKTTSKL
LDTLNRASVHMRRAMVLAHRGGHWTTLQWACRTLWDQYRTLALILEHAQGPDAHARQLTL
EQLYTVITPLLVLASDLLMDMMEKLRLIHITSRADLNLIMQSCEASLYFSVPMDDGLLTV
IDLRWLRTLVLHTLELLYYQAKWENLAHLALLFNTYTWERYSHMVTPVLVHAQRRLLDRI
SCFGGPPAPQPHFNLQNYASRQLLFPCGGGQIMITGNDAEPEPKELADVKRAMCLVCVPL
DVEDTLHCFRDTLEKRNHTLLTFQHSRTLLLLLLADTQHSYVEVPFSKETSGVLQGKVEF
SIAASTLPGISPPDFSAEDFSSLGSIYSTTLPPTQLQTVFSSYNSAIKYLQANKYTSLQV
QALHDLGNLHFYNGNRKSAHAFWSKALDCALQSSGVLESWDGDSWGSSSSQETLQHAGVW
GCLQGALLSAKIAQHILTSNIDQRTKCCLLCGKLFKCLLMASMPHPMTDLEYSTYSVETE
LIPGIDLFSEPDRGNLGTTVASLSFLCHWLYTSGHLLKVLPVLALYLYIARTVCRDLHLT
VTCRILKVKVLTELGAFTEAFKELSSLTFGKEIPVPHGCHRTEKPFWVLDDRGQVIRISG
ENALALPVCLMSLAVDKSKGLQLSARKLTLGEVKAILLKEAHALVSPELFTPHPLSTDPE
EMELAVEIRLLMSNINMQQGRMAASADLSVSALRLLQRSPVFQSDFRPLPPPGPPSSAFR
RPRAKAHQTSSGDAKSVLSLHSGDVPEEVEARERMDLLFWLRCRLAVVRSLVGHIPGTAI
CSGADSSAEALRLLKEGLEEAEAWGDLDTQALLLLQGVQLNTHRGRPREDSSSMLQEIVS
LLSGRSAQSLHSQMTLAEAVLHLSELRGTGSQTFHLLTXKLLQQQLCAFGESIGLKKGGE
VELLAGIKNIYLPQLPLLAKTTMRIGHSLALQALSISSEGGEEPWRPFISAQEVLQSALS
ISQASANRDRQLEADILYCTGEVGRRLISMQKSDPEKVLEAFFGCLTTFNYTLTQSLRLT
HRCYLEMALIYLQECEQITPPPKHLTPPPSKTPNESSKEIVRETYLLLSWICLKIALKTS
EVIGKCGHLHGFTQVTEGPVPLSSTKALPDFALNDLFHPCGGLENPENCITNPEAFMDAE
HEINRRKCPQLTWVHMSRYYMHLINLLQVSSQPGAVQGVDGLLSMSGDPKLALRLSQLHT
FFSCHQPSYRDQWAVPDPPAALILRPQRIQHDQPLSDLCPWASTDIQELSIQWYRPTSED
NTILLLFAVNNAPLSAMSPTEEVVAALQAGQRAICLDRLKAVHALLSSTCVEVDGHVSPS
TSSAASFSPQKEKEQKTSTSTPHRQEMFLEKTKNICSEIRNLLKPDCNSATITEMPFDPS
MQTLLNLERCFNPATGGTLQDTAIITWLLSLLS
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagcaacggacgcaaaacacagttcctcgcggctcgctcgcgctgtttggacc
atggaccctgcgccagcgtcctactacggacccctggataaaaacaacccagtcctgtta
gcttttcaaagtgacctaaaagagtttaaggcacatataaagaaactttcaagttcaccg
aactacgactaccggtcctactctagagggtccataaaactgtttgaaacatggaggaac
aagtataaatctcgccttcctgcgtcttatttcgaagagcacctgttgcaaacagcagat
ttcctgctttactctaagcttcacaggcttgctctctggcaagggtacagactctatctg
cagcagttttgcacactgagcctagaaagcatccgagatgtggagcacttcaggcagtcc
ttcttctcagatggctttgattcaaagagagcccgactaacgttccttgctcttcaggga
gaatgccagtgcatcttctatttggagaaagagaggaatgcactgccagaccagagtgcg
gttcaaaacctgcgcgctgagcatcctgggatttgtgcgcattctcattgtatattttgg
attttggatttttttgtgtcttttgttcaggttttagagtacttactatgggcatgcaca
tgcctagagacctctgttcctctgctgactgccaacttcctgccgtggagggccacactt
tactgtgctgtttgtgaatgttattttcatgagtgtgcttcagttcaggcagaggtgttt
gctcgccgagcccttggcaagatcagtgaactggccaagctggaggagagatggctccca
agtgctggctcccaagtgtcattggagacccaacaagcttttaaggaggccacaataaaa
actccatggcctcgcacaccaaccgagcggatcctgatggagatgttcgagggcaatgct
gctcgggcttctggcagtgctggaagctctagggggacaagctctgtcaggcctctgcag
accggcatgcctgaagaattcgaggtccaggatgttgtgctggagctcatttcggctggc
acaagcttgttgtctggtaccctttttcatcctctctgcctctgtgttttggtgattctg
acccacacttctgttgagagcctgcctccctctatcaatgcagtcacttctacctcctct
ctctttgacacagctgttgctggaaagagtaagatcgcagtagatgctgcggtgaagttc
gtgaagcaggtctttagatatgaacagtggagcatatgttcaaacatggaaggccgcacg
tttaggaagtatgagctggaactgaagattttggaggctgtggagcatttgatatccaat
caaaaagttaaattcatcgtgaaagatgctgcttttgatggtcaagctgatgagatgggt
ttgatggagtttaagaagtcaaatgctaattgtgtacaggcttggcgtcagaaacaaata
gacctacagaagtgcagaaggcccctggttggcatcagaagaaagaatcagatgagccac
gagaccaagaaaatacttgaggaggccataatgctaatggagaaagctgagcttgaagag
agaaggctagttagttgtgcatttccttcagagaacaatttagaaatggcagagaagaga
cagccaccaccagccccaatagtcctctcacgctccaaccgctccatgaccttcaaacct
gcaccatacgccctggaggaggaggtttgctggtactgtatttatggaagagaggcagag
ggtgtcaacctaaaagtacgacttaaagactgcttcttgtgtgggactggagatatgact
cctgccaggggtggacatttacttcatgtagacgggttggaacctgataagaagtacatt
tttgcagtggcctgcttttaatgcaaagggcaaaatggtgggtggtgcaccattggagag
accacaaggcctctactggcctctctgcctctaccactactaacaacctgggcccacata
gctcaggtggcatatcagacaggagtctactcccttgccaaaagagcttgtaatgagctt
tggagtcactttactcttcccccaagtccagaggcagaacaagaaggctgtcttgaagga
ctggctcagacaagactccacccaaagacccctgcagctttccctctcctctcctacagc
agctgttttttttgttccactatcttcatccagacagatattcacatccaagaggggacg
ttattctgtgacagtctctgtgagngggggcctttgatctggggccaggaggccaggctt
gcagagtgtgaacgtatgctggtggccattgatcttgctctgcacctcaatgacagtggt
ggcgccctgcaggctgtagtgagctgttatggccttctcactccattaatcttcaaccag
attgctccttcagagcctggcatagaggtactgtggaagtgctttacagtgctgctggag
attccagaagtcctcaagcagaaacggcctgttgccaccacagagtccctggaacacatg
gttgcctgtatgacatattctttagccaagagcttgagctccactctggagaatcatatg
gcatcatctgtgtttgatctgggaatgaggcttcttcaggagatcactgagcccccacag
caacccgccaaaaaaacatcatcagtggagctggatgggaagaagacagcttccgtccat
gatgaggggccaagcaagcagctaaaggttttagaggccattgtcatgaaaaccatgcat
tcagaaacattaggaaaccgtgatgtcacttcctgtaacaaaacagggtctgatggatgt
gagcttactggagaggaagaccctgtcgtactctacatggtgattgaaaacagccctctc
cagcatgactttaaagaggtgatgaagttcaagcagaagtcttgttttctggagtttgtt
gtgcacttactcaagaaagccctgctagaagatgagctggatctggtgttgcagtgggag
cagagcatcttggactggctcagcagacgtgatgaggctttgtttgggctaaagaagcac
tcaagtctaccaggggaggagtttaaagacttcaccacctctgtgattgagtacaatacc
aaaaaacaaaaaggtggcacattttgggatggcaggaagttgctacagaagaaacttctg
attgcattcaagagccaaaactctgaaagagaggtcagtgctgtggacgtcctgctgagt
caactggctactcttatcagaagacatcagcgctgctggaagctgaggcagattttcagt
catctttcgcagtctttcttctctctggctcactgtggaatgctgattatgtggaagaac
gttccacagcacatcacgccacctgaactgacgcttccaaatcccaaagctgtaccccgt
cctagaagccgtgctcacaaaaaagatgttgagcacaaaatgaagtgggactttcggcac
acaacacggcacacacgtgactctaaagctgtcagcgctcataaaaccacctctaagtta
ctggacacactcaacagagcctctgtacacatgcgcagagctatggtgctggctcatcgg
gggggacactggacaactttacagtgggcgtgtcggactctctgggaccaataccgcaca
ttggccctgatattggagcatgcccaaggccctgatgcccatgcgagacagctgacgtta
gagcagctgtatacagtgatcactcctctactagtactggcctcagatcttctaatggat
atgatggaaaagctgaggttaatccacatcacctctagagcagatctcaaccttattatg
cagagctgtgaggctagcctgtacttctctgtcccaatggatgacgggctcttgacagtg
atagatctgcgctggctgaggactctggtcctgcacacattagagcttctgtactatcag
gccaagtgggagaatctagcccacctcgccctgcttttcaatacatatacatgggagcgc
tactctcacatggtaacacctgttctggtgcatgcacagaggagactgttggacaggatc
agctgttttgggggccctccagctcctcaacctcacttcaacctacaaaattatgcaagc
agacagttactgtttccctgtggaggaggtcagattatgatcactggaaatgatgctgaa
ccagagcccaaggaacttgcagacgtgaagagagccatgtgtctggtgtgtgtaccgttg
gatgtagaggacacactgcactgtttcagagatactctggagaaaagaaatcacacactg
ctgacctttcagcacagccgaactctactcctgctgctactggcagacacacagcactca
tatgttgaggtgccattttctaaagagaccagcggcgttctgcagggaaaagtggaattc
agcattgcagccagcaccctgccaggcatcagccctccagacttctctgcagaggacttc
agctctctgggctccatctacagcaccaccctgccaccaacacagctccagaccgttttc
tcttcctacaacagtgctattaaatatcttcaagcaaataagtacacctcccttcaggtg
caagcactccatgaccttggaaacctgcatttctacaatggaaatcgaaaatctgcacac
gctttctggagtaaggctttggactgtgctctgcaaagctctggagttctggaatcttgg
gatggtgactcatggggcagcagctcctctcaggaaaccctgcagcatgctggggtatgg
ggctgcctccagggagctttgctttcagccaagattgcacagcacatcctgacttctaac
atcgatcagcgcacaaagtgctgccttctctgtggcaaactcttcaagtgcctactgatg
gcctctatgccccatccgatgacggacttggaatactccacatactctgtggagacggag
ctgatcccaggtatcgacctcttctctgagcccgatcggggaaatctcggcaccactgtt
gccagtttgtcttttctctgtcactggctgtatacctcaggacatcttctcaaggttctt
cctgtgctggctctgtacctgtatattgccagaacagtgtgtcgtgatctacacctcact
gtcacatgcagaatactgaaggtgaaggtattgacagaattgggggccttcactgaggcg
tttaaagaactcagcagtctcacatttggcaaggaaatccctgtacctcatggatgccac
agaacagagaagccattctgggtgctggatgaccgtggtcaagttatccgaatctcagga
gaaaatgctctagcacttcctgtttgcctgatgtctctagcagttgacaagtccaagggt
ctccagctcagtgccaggaaactcacattaggagaagtcaaggccatacttctaaaagaa
gcacatgctctggttagtcctgagctctttaccccacatccactgagcacagatcctgaa
gaaatggagctggcagtggagatcagactgttaatgtccaatatcaacatgcagcagggc
agaatggctgccagtgcagatctgtcagtgtctgctttgaggctcctccagaggtctcct
gtgtttcaaagtgatttccgcccgctgcctcctcccggaccaccctcctctgcattcaga
cgacccagagccaaagcacatcagacaagctctggggacgcaaagtctgttctcagtctc
catagcggagatgttccagaagaagtggaagcgagagaacgcatggatctccttttctgg
ttgcgctgtaggttggcagtggttcgctcccttgtaggccatatccctggaactgcaatc
tgctctggtgcagacagcagtgcagaggcgctccgactgctgaaagaaggtctggaggag
gcagaggcctggggagaccttgacactcaagccctgctgctcctacaaggcgtccaactt
aacacacaccgtggcagacccagagaagacagctcatccatgctacaggagattgtgagc
ttgttatctggacgcagtgctcaatctctgcactctcaaatgactctagctgaggctgtg
ttacatcttagtgagctgagaggaacaggaagccagacttttcacctgctcacancgaaa
ctactgcagcaacagctctgtgcctttggagagtccataggtctcaaaaaaggaggcgag
gtggaactactagctggcataaagaatatttatcttccacagcttcccctgctggccaag
acaaccatgcggatcggtcactctttggcattgcaggccttgtcaatttcctctgaggga
ggtgaggaaccctggaggccctttatatctgctcaagaagttctgcagtctgcgctcagc
atctctcaggcctctgccaacagagaccgccagctggaggctgatatcctctactgcaca
ggagaggtgggcagacgtctcatttccatgcaaaaatctgatcctgagaaagtcctagaa
gccttttttgggtgtttaactacatttaactatactcttacccaaagcttgcggttgaca
cataggtgctacctggaaatggcactgatatacttgcaagagtgcgagcagattacccca
ccccctaaacatctgactcctcccccctcaaaaacacctaatgagtccagcaaggaaata
gtcagagagacctacctactgctaagctggatttgtttgaagatagctttaaagacatca
gaagttattggcaaatgtggccatttgcatggattcactcaagttacagaaggccctgta
cctctttcttcaactaaagccctgcccgactttgcattgaatgatctcttccacccttgt
ggggggctagaaaaccctgagaactgtatcaccaatcccgaggcattcatggatgccgag
catgagattaacagaaggaaatgccctcagctgacctgggttcatatgtcccgctactac
atgcacttaatcaacctgctacaggtctcttcacaaccaggagcagtgcagggtgttgat
gggctgctgtccatgtccggtgatcccaaacttgctctcagactctcccagttacacacc
ttctttagctgtcaccaaccctcttacagagatcagtgggccgttcctgatccccctgca
gctctaatactgaggcctcagcgaatacagcatgaccagccattgtcagatctttgcccc
tgggccagcactgacatccaggaactgagcatccagtggtacagacccacatcagaggac
aacacgattctgcttctctttgctgtaaataatgctcctctatcagcaatgagccctact
gaagaggtagtggcagcactacaggctggacagagagcgatctgtttggacaggctgaag
gctgttcatgccctgctgagctcaacatgtgtagaggttgatgggcatgtttcaccctcc
accagctcagccgcctccttcagcccacaaaaagaaaaggagcagaaaacgtctacctcc
acccctcaccgacaggaaatgtttttggagaaaactaaaaacatctgctctgagatcagg
aatttactgaagcctgattgcaattcagccaccattacagagatgccctttgacccaagc
atgcagactcttctgaacctggaacgctgctttaatcctgcaacaggtggcacactgcaa
gatacagccatcattacatggctcctctctcttctgagctaa
DBGET
integrated database retrieval system
