Cyprinus carpio (common carp): 109067730
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Entry
109067730 CDS
T05134
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
ccar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109067730
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109067730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109067730
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
109067730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Ig_Rha78A_N
Interfer-bind
fn3_SORL1
C2-set_2
Fn3_Dep-1_3rd
C1-set
fn3_2
TMEM154
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
109067730
NCBI-ProteinID:
XP_042616929
Ensembl:
ENSCCRG00000028503
UniProt:
A0A9R0AZB5
LinkDB
All DBs
Position
A7:36348651..36484553
Genome browser
AA seq
1450 aa
AA seq
DB search
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFQFSTEPSDTLAVRGAQTLLNCSVHSE
FPAKIEWKKDGSFLSLASDDRRQVLADGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISRTARLSVAGIPRYLSQPEAASVRVGDSHVLNCEVNPDLVSFIHWEQNKEPVELDQRVF
TLPSGALVISNATEADAGLYRCVIDNAGPTKTSEEAEIQILPESGEERTLEFLLEPQHVS
KVIGESVLLPCVVTGHPTAYVTWTHKDQLIEYSKGRFEVLGGGSLRILSLTEEDAGVYSC
MADSVSGSIEAQTVLTLKASPQFLKKPANIYAHEATDVTFECEVTGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLLVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQDVAIPSPPPT
SLTRATTDRLMPGSRGSAGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDDVTYSVYYS
LEGNNRERIVNTSRPGEMQVTIQNLMPDTKYSFRVVAHNRNGPGESSAPLRVATQPEVQV
PGPAPNLHAVVMSPTTVSLSWDMPLTGNGEIQNYKIYYMEKGMDSEQDLDVNTLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDISVRTYSDVPSAPPQNTTFEVLNSKSIMVRWQPPP
ADAQNGEITGYKIRYRKGTRKSEAAEITSGSQLYQLIDGLQRGTEYMLRVSAITVNGTGP
ATDWTTAETFESDLDETTVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYTIGYGIGS
PHAQTIKVDYKQRYYTIENLNPSSHYVITLKAFNNVGEGIPVYESAVTRPQSDPIDPDVD
LYELFHAPYTPVPDPLPILPPVGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWK
TNIPANTKFKVANTTTLTHTVAGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFEAIPSS
APKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLT
HQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMANDQAPGILVKSGRPS
APEQGFGSVGKTDMSGTGDNHILIIVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAA
CKSANGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPETNPVMTDTPIPRTSQDITPVD
ASMDPMLQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHH
HHYHLGSLSSPTHSYLHHQNSTRSITTPISHLDRAESTESVRNIPSADLLPPSGQPCCTT
DLSETDISYHSSAAEEEPVFTTPTAHVRPTHPLKSFAVPAIPAHSMYDSAALPSTPLLSH
TGPHSVKTASIGTLGRTRTPMPVIVPSAPDVSESSRLHEDAGSNYETDELTEEMAHLEGL
MKDLNAITTA
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacagtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattccagttctccaccgagccg
tcagatacgctggcagtgcggggagcgcagacgctgctcaactgctcagtccacagtgag
tttcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcagacgat
cgcaggcaggtcctggccgatggttctttactcatcagctcagtggtccactctaaacac
aataaacccgatgagggggtttaccagtgcgtggccactatagacaacctgggcaccatc
ataagccgtacagctagactcagtgtcgcaggtatacctcggtacctcagtcagccagaa
gccgcgtcggtgcgggtgggtgacagtcatgtgctgaactgtgaggtgaatccagacctg
gtgtctttcatccactgggaacaaaacaaagagccggttgagctggaccagagagtcttc
acgctgcccagtggtgctcttgtcatcagtaacgccacagaggcagacgcaggcctgtac
cgctgcgtgatcgacaacgctgggcccaccaagaccagtgaagaagcagaaatacagata
ctgcctgaatcaggggaagaaaggaccctggagtttctcctggagcctcagcatgtgtct
aaagtcattggagagagtgttctgctcccctgtgtggtgacgggacatcccacagcctac
gtcacatggacgcacaaagaccagctcattgagtacagcaagggccgctttgaagtgctt
ggtggaggcagtctgcggatcttaagcctcactgaggaagatgccggtgtgtacagctgc
atggcagacagtgtcagtggatccatagaggcccagactgtgctcacgctgaaagcttcc
ccacagtttctgaagaaaccagctaacatatatgctcatgaagccacagacgtcacattc
gagtgtgaggtcaccggctcacccgctcccaccatcaaatgggtgaagaacggagatgct
gtcattcccagtgactatttcaagatcattaaggagcagaacttgctggtgctggggctg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgacgctggcaatgtgcag
tcgagtgctcagctcatcatattggatcaagatgtagctatcccctccccccctcccacc
tcactgacccgtgccactactgaccgtctaatgccaggctccagaggcagcgctggtccc
acgccctccgccccccgtgatgttgtggcctccctggtctccacccgcttcatcaagctg
acctggcgccttcctgctgaaccgcatggagatgatgtcacctactcagtctactacagc
ctggagggaaataacagggagaggatagtgaacaccagccgtccaggagaaatgcaagtc
accattcagaacctcatgccagacaccaagtactccttccgcgtggtggcccacaacaga
aacggccctggagagagctcagcgcctctgagggtcgccacccagcccgaagtccaggta
cctggccctgctccaaacctacatgcagtggtcatgtcccccaccacagtgagtctcagc
tgggacatgcccctcaccggcaatggcgagatccaaaactacaaaatctactacatggag
aagggcatggacagtgagcaggatctggatgtgaacacactgtcctacaccatgactgga
ctgaagaagttcacagagtacagtttcagagtggtggcctataacaagcatggacctgga
gtgtccactgaggacatatccgtgcgcacatactctgatgtccccagtgctccgccacag
aacacgacgtttgaagtgctgaactctaagagcatcatggtcagatggcagcctccacca
gcagatgctcagaacggtgagatcaccggctataagatccgctacaggaagggaacgagg
aagagcgaggcggcggagattacttctggatcgcagctctatcagctcatagatggtctg
cagcgaggcactgaatatatgttgcgagtgtctgctattacggtcaacggcacgggtccg
gccacagactggaccactgctgagacgtttgagagcgatctggacgagacaactgtgcca
gatgtcccgagctccttgcatgtgcgcccacttgtgaacagcattgtagtgagttggaca
ccgccagagaaccaggacattgtggtgaggggttacaccatcggctatgggatcggcagc
cctcatgcccagactattaaagtggactacaaacagagatactacaccattgagaacctg
aatcccagctcacactacgttatcacactgaaggccttcaacaacgtgggggagggaatc
cctgtgtacgagagcgctgtcacgcgaccccaatcagaccccatagaccctgatgttgat
ttgtacgaacttttccatgctccatacactccagtaccagaccctttacccatactgcct
ccagtgggtgttcaagcctctgttctgagccacgacaccatcaaagtcacctgggcggac
aactcgctgcccaagaaccagaagatcacagatgcacgttactacacagtgcgctggaag
accaacatacctgcaaacacaaagtttaaggtggctaataccaccacactaactcacact
gtggcgggtcttaaacctaacaccttatacgagttctcggtcatggtgaccaagggccgg
aggacaagcacctggagcatgactgcacatggaacaacttttgaagcaatcccaagttct
gcacctaaagatgtgactgtagtgagcaaagagggacgaccacgaaccatcatcgtcaac
tggcagccaccttcagaagccaatggcaagataacaggttacatcatttactacagcact
gatgtgaatgctgaagttcatgactgggtcattgagccagtagtggggaacaggcttacc
catcagattcaagagctgacccttgataccacctactactttaagatccaggcgcgtaac
tctaaggggatgggtcccatgtctgaagctgtccagttccgcactcctaaagctgaatcc
tctgacaaaatggctaatgaccaagctccaggtatattggtgaaatcaggaagaccctct
gcaccagaacaaggttttggatcagttgggaaaacagatatgtctggcactggtgataat
cacatccttattatcgtcataattgtgtctgtgggtgcatttaccatcatcctggtggtg
gttggtgccttcctgtgtacacgccgtaccacaacacagcagaaaaagaaacgtgcagcc
tgcaagtctgccaatggatcccacaagtataagggcaattccaaagatctgaagccacca
gacctctggatccaccacgaacgcttggagctgaaacctatcgacaaatcgcctgaaact
aatccagtcatgactgacacaccaatcccccgaacctcccaagacatcaccccggtggat
gcctctatggatcctatgctccagagacgtaactcctaccgtggccatgaatcagaggac
agcatgtctacactggcaggccgtcggggaatgagacctaaaatgatgatgccctttgat
gcacaacctcctcagcctgtgattagtgctcaccccatccattccctcgataaccatcac
catcattatcacttgggcagcctgtcctcgccaacacacagctatctccaccaccagaac
agcacgcggtccatcaccacccccatctctcatctagacagggcagagtccacagagtca
gtaaggaacatccctagtgctgacctgctccctccatctgggcagccctgctgcaccact
gacctttcagagacagacattagctaccacagttcagctgctgaggaggagccagtattc
actacgcccacagcacacgttcgtcccacacacccactcaagagttttgcagtgcctgcc
atcccagctcactccatgtatgactcggcagcattacccagcactccactgctgtctcac
acagggcctcactcagttaaaacagcctctatcggtacattgggaaggacaagaactcct
atgcctgtcatagttccaagtgcaccggatgtctcggaaagcagcagactgcatgaagat
gcagggagtaattacgagacggacgagttgacagaggaaatggcccatctggagggctta
atgaaggacctaaacgccatcacgacagcctga
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