Cyprinus carpio (common carp): 109067898
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Entry
109067898 CDS
T05134
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04310
Wnt signaling pathway
ccar04520
Adherens junction
ccar04916
Melanogenesis
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109067898
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109067898
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109067898
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109067898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109067898
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
109067898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
STATa_Ig
Motif
Other DBs
NCBI-GeneID:
109067898
NCBI-ProteinID:
XP_042604278
UniProt:
A0A9Q9XM07
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All DBs
Position
B21:18945901..19008032
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AA seq
474 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMIPFKDEEDHEKIRESAFTESDLADLKSSLVNESEISQNSNSA
VIRRGQQEDQRIYTDKREHLDDVPKHQDGGMYKASYSGYPFLMLPEPYLPNGPVSPSSNK
VSVVQQGMHPLTPLLPYDHFNPSPPHIPTDVSQKPGVHRHQSQEISGFYSLPQGQITPSM
NWPNQPVYPLPSCGFRQSFSSGLQSSSSFPRFSHSLMLQSGMHPTGIPHPAIVPPSGKQE
HDQFDRNIYTSSRANDLLFGPVRSGIVFKSHAEMKREKEPKKPVIKKPLNAFMLYMKEMR
AKVIAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYGK
KKRRKRDKQQDSGTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQRGRCASPHSSD
GSAIDSPPSPVNHPPNPASPTSSPLPQSTKRSAHPPRLSLDFSRIKTESHNNPD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggtggagggggagatgatctcggggcgaatgatgagatgatcccg
tttaaagatgaagaagatcacgagaagatccgagagagcgcgttcacggagagcgacctg
gctgatctcaaatcatctctggtcaatgaatccgagatcagccagaactcaaactctgcc
gtgatcagaagaggacagcaggaagatcagagaatctacaccgataaacgagaacatctg
gacgacgtgcccaaacatcaagatggtgggatgtataaagcgtcgtattctggatacccg
ttcctgatgctgcccgagccgtatctaccgaacggacccgtctccccatcttccaacaaa
gtgtcggtggtccagcaggggatgcatcctctgacgccgctgctaccctacgatcacttc
aaccccagtcctccacacattcccacagacgtcagccagaaaccaggtgttcacaggcat
cagtcacaggaaatctccggtttctactcgctgcctcaaggccagatcactccgtccatg
aactggcccaatcagcctgtctatcctctgccctcctgcggcttcagacagtccttctcc
tccggcctccagagcagctcctccttccccaggttctctcattctctgatgcttcagtcc
ggcatgcaccctacaggcatcccgcaccccgcgatagtgcctccctccggcaaacaggag
cacgaccagttcgacaggaacatttacacaagttctagagcaaatgatcttctgtttggt
cctgtgagatctggaattgtcttcaagtctcatgcagagatgaagcgcgagaaggagccc
aagaagccggtgatcaagaagccgctgaacgcgttcatgctctacatgaaggagatgcgg
gccaaagtcatcgctgagtgcacgctgaaggagagcgccgccatcaaccagatcctgggc
cgacggtggcacgctctgacccgtgaggaacaggccaagtactatgaactggcgcggaag
gagcgacagcttcacatgcagctttatcccagctggtcggcccgcgacaactacggcaaa
aagaagcgaaggaaacgagacaagcagcaggactctggcacagaccccggctcgccaaag
aaatgccgcgctcgctttggcctcaaccaacagacggactggtgcggcccctgcaggagg
aaaaagaagtgcattcgctaccttcaaagaggacgctgcgccagcccccattcttccgat
ggaagtgctatagactcccccccttcacctgtcaatcacccaccaaaccccgcctccccc
accagcagtcccctccctcagagcaccaaacgctccgcccatccacccagactctcgctc
gacttcagcagaattaaaacagagagccacaataacccagactga
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