Cyprinus carpio (common carp): 109067987
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Entry
109067987 CDS
T05134
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109067987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109067987
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109067987
mRNA degradation factors
5'-3' decay
Decapping complex
109067987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
109067987
NCBI-ProteinID:
XP_042597925
Ensembl:
ENSCCRG00000016759
UniProt:
A0A9R0AH62
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Position
A4:complement(13584323..13594051)
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AA seq
493 aa
AA seq
DB search
MTASTGGGGSCLSMSLSALKRLDPYINSITDLASQVALYTFNNTTNEWEKTDVEGTLFVY
NRLASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDKEDCQR
IAELMKNLAGQEQQLQPQMAIGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
GVIYGNPHLIKPIPLKPAQDTHIQGQMQQDTEMDSKHLSVITLFGAQSKPDSVSPQPTSA
VSRVGPMRPAVARSLSYDEPSLASGAVVSNTPTQHCPAIHKLMSGSLLQPLSESPESRLC
ENGAVQNQPDPIQKLLMNPLPVAVTQGMPSLQLNHGESGVGPQIHPIAKPSGPALAQHLL
YVPNKAPPAGVAGNMVSPHELLQRLTLVQQEQELLQPSLTTSSSSLSKTNSTQVSSPQRI
PATVAPTLLLSPSMFTQTKATRAEPEPVEPRALSKTQLQATLLHLIKNDASFLDTIYEAY
VSRLGTDSSSKPF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaagcacaggtggcggcggaagctgtttatccatgagtctgtctgccctaaag
agactcgacccctacattaacagcatcacagacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacagatgtggagggaactctgtttgtctat
aacagacttgcctcccccaggcacggcttcaccatcctgaatcggttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataaagaagactgtcagcgt
atagcggaactcatgaagaatttggcagggcaggaacagcagttacagccgcaaatggca
attggctctgtctctccgcgatcagcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgataagggaaagctcagcgagccaaaagaaattggcagtggt
ggtgtcatctatggaaacccccatttgatcaaacccatccccctcaaaccagcacaggac
acacacattcagggtcaaatgcagcaggatacagagatggactcaaagcacctctcggtt
atcactttgttcggtgctcagtcaaaaccagactctgtctcgccacagcccacctcagct
gtcagcagggtgggtccaatgcggcctgcggtggcccgctcgctgtcttatgatgagcct
tctctggcaagtggcgccgtggtgtccaacacccccacacagcactgtccagccatccac
aagctcatgtctggttcgctgctgcagcctctgtctgaatccccagagagtcgtctgtgt
gaaaacggggcagtccagaaccagcctgacccgatacaaaaactgctaatgaaccctctt
cctgtggcggtgactcaagggatgccttccttacagttaaatcatggagaaagtggggta
gggccccaaatccaccctatagctaaaccctcagggccggccctggctcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacatggtgtcgccacatgag
cttctgcaaaggctcacattggtgcagcaggagcaggagctcctacagccgagtctgacc
accagcagctccagtctcagcaaaactaactccacacaggtgagctcaccgcagcgtatc
ccagcgactgtagcccccaccctccttctgtcacccagcatgttcacccaaactaaagcc
acgagagcagaaccagaaccagttgaacccagagcacttagcaagactcagctacaggcc
acgctgctccacctcatcaagaatgatgcctcattcctggacaccatctatgaagcatat
gtctcccgcctcggaacagactccagctcaaaaccattctga
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