Cyprinus carpio (common carp): 109068176
Help
Entry
109068176 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04020
Calcium signaling pathway
ccar04260
Cardiac muscle contraction
ccar04261
Adrenergic signaling in cardiomyocytes
ccar04270
Vascular smooth muscle contraction
ccar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109068176
04020 Calcium signaling pathway
109068176
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109068176
09153 Circulatory system
04260 Cardiac muscle contraction
109068176
04261 Adrenergic signaling in cardiomyocytes
109068176
04270 Vascular smooth muscle contraction
109068176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109068176
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109068176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
109068176
NCBI-ProteinID:
XP_018940576
Ensembl:
ENSCCRG00000017260
UniProt:
A0A9Q9V5F6
LinkDB
All DBs
Position
A8:12670779..12692096
Genome browser
AA seq
1855 aa
AA seq
DB search
MESGGGGGGGGGVAALASFIMNEEELKRKQREKLKKLQATGGNPRPPRSLFFFTLKNPFR
KTCINIVEWKPFEIIILLTIFANCVALAVFLPMPEEDTNNTNLTLESLEYIFLIIFTLEC
FLKIVAYGLLFHEXAYLRNCWNILDFVIVFMGLFTLGVDTINTIAGVPKEKGGGFDMKAL
RAFRVLRPLRLVSGVPSLQVVMSSILKSMLPLFHIALLVFFMVTIYAIMGLELFKCKMHK
TCYYQGTNIIAIRENEKPSPCAQAGHGRRCTINGTECRAGWPGPNFGITHFDNFGFSMLT
VFQCITMESWTDVLYWINDAMGNDWPWIYFLTLILLGSFFILNLVLGVLSGEFTKEREKS
RSRGEYQKLREGQQMDEDLKGYMEWITHAEVIDGDYEALLLLRKDTDSETDSLYQMEGIN
RVIYFYRLARRWNIVLRRKCHVWVKSKFFNWWVLLVVLLNTLVIATEHHNQTEGLTSFQD
TANVILLICFTIEMVMKMYAFGLRAYFMSIFNRFDCFVVTIGILEIFLVVSNIMTPLGIS
VMRCIRLLRLFKITRYWTSLNNLVASLLNSVKSIASLLLLLFLFIVIFSLLGMQVFGGKF
NFPDRVIQRSNFDNFPQALISVFQVLTGEEWDSIMYNGIMAHGGPQSPGILVSIYFIILY
FCGNFVLLNVFLAIAVDNLAEAESLTAAQKEKAEEKARRKLMRTLPEKSEEEKALMAKRL
MESRSKAEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADL
QLKETVVPMPEASSFFIFGPQNKFRKLCHRIINHTTFTNIILLFILLSSISLAAEDPIDP
HSFRNKVLAYADIVFTTVFTIEIVLKMTVYGAFLHTGSFCRNSFNILDLIVVGVSLLSMG
MESSTISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAIKTIGNIVLVTMLLDFMFAC
IGVQLFKGKLYYCTDPLQTTAEECQGTFLKHVQNSLHDMEVHQRKWVNSDFNFDNVLNGM
LALFTISTFEGWPEILYKAIDSNAVDTGPLYNNRVGISIFFIIYIIIIAFFMMNIFVGFV
IVTFQKQGEQEYKDCELDKNQRQCVQYALKARPLKCYIPKNPHQYRVWYFVTSCYFEYLM
FFLIMLNTLCLGMQHCNQSDHITKLSDNLNLIFTVLFTGEMIVKLIAFKAKGYFGDPWNV
FDFIIVVGSIVDVVLSEVDAALEASGGLWCLHGCAEVNPMQAIADAENVRVSITFFRLFR
VLRLIKLLNRSEGIRNLLWTFIKSFQALPHVGLLIVMLFFIYAVIGMQMFGKVALVDGTE
INRNNNFQTFPQAVLLLFRVATGEQWPKIMLASMYGKLCDPKSDYGPGEEYTCGSSIAVF
YFLSFYMLCAFLVINLFVAVIMNNFDYLTHDWSILGPHHLDEFKRIWAEYDPEATGRIKH
LDVVTLLRRIQPPLGFGKFCPHRSACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKT
EGNFEQANEELRAIIKSIWKRTSMKLLDQVIPPIGEDEVTVGKFYATFLIQEHFRKFMKR
QEEYYGYRPTKKNADEIKAGLRSIEEEAAPELHRAISGDLIAEDEMERALEAGEEGIYRR
TGGLFGLHTDPFSSEPNSPLSTQMTSQRPLQFVETHLEDVESPPDSVFLPNTVFFPDNMP
ATNTNNNANFAEDMSSRFTFESESLSAAATRNYSYEDISENRDSSSYVGGASSVDDRRLS
DFTVRTDITQFPFNPSYGAAKNHREATEASPATDKLIQQALRDGGLDSLAEDPQFVYVTR
KELAEAINIGVEDMEGMAQRIVNGQSSKVTKRKCRPIPIPPGTESTKPKENTSAV
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaggaggtggcggcggcggtggtggtggggtggcagctttggcctcattcatc
atgaatgaagaagaactaaagagaaagcaaagggagaaactcaagaaactgcaggccaca
ggaggaaaccctcgacctccacgttccttgttcttcttcacgctcaaaaaccctttccgg
aagacctgcatcaacattgtggaatggaaaccctttgagataattatcctgctaactatc
ttcgctaactgtgtagctctggctgtgtttcttcccatgcctgaagaggacaccaacaac
accaacttaacattggagagtctggagtacatcttcctgatcattttcactcttgagtgc
tttctaaagatagtagcgtatgggcttctgttccatgaatgagcctatttacgaaattgt
tggaacatattagactttgtcattgtgttcatggggctcttcacgcttggtgtggacacc
atcaacacaatagcaggagttcccaaagagaaaggaggagggtttgatatgaaggctctt
agagcatttcgagtcctgcgaccgctgcggctcgtgtcgggagttcccagcctccaggtg
gtaatgagctctattctgaagtccatgttgcccctcttccacattgcattgctggtcttc
ttcatggtcaccatttatgccattatgggtttggagctgttcaagtgtaaaatgcacaag
acatgttactaccagggcactaatatcattgccatcagggagaatgagaagccatcgccc
tgtgctcaggctggacatgggcgccgctgcaccatcaatggcactgaatgtcgggcaggt
tggcctggtcccaacttcggcatcacccattttgacaactttggcttttccatgctcaca
gtctttcagtgtatcacaatggagagctggactgatgttctctactggattaatgatgcc
atggggaacgactggccctggatctacttcttgactctgatacttctgggctccttcttc
atcctgaacctcgtccttggagtactgagcggggagtttactaaggaaagggagaagtca
cggtcacgaggagagtaccaaaagctacgagagggacaacaaatggatgaagatctgaaa
ggttacatggaatggatcactcatgctgaagttatagatggagattatgaggcgcttctt
cttcttagaaaggacactgattcagagacagacagtttataccagatggaggggatcaac
agggtgatctatttctaccgcctcgcacgccgctggaacattgttttacggaggaagtgt
catgtttgggtgaaatctaaattcttcaactggtgggttctccttgttgtgttactcaac
actctggtcatagcgacggagcatcataaccagactgaggggttaacaagtttccaagac
actgccaatgtaatcctgctcatctgtttcacgattgagatggttatgaaaatgtatgcg
tttggtctgagagcctactttatgtccatcttcaaccgatttgactgctttgtggtcacg
atcggaatactggagatcttcctggtcgtgtcaaacatcatgacaccactggggatctct
gtgatgaggtgtatacgactcctacgcttattcaagatcacaaggtactggacatcacta
aataacttagtggcatccttactcaactcagtgaaatccatcgcctccctactcctgctc
ctcttcctcttcattgtcatcttctccctcctgggtatgcaggtgtttggtgggaaattc
aactttcctgacagagtgattcagcgcagtaactttgacaacttcccacaggccctcatc
agtgtgtttcaggtcctaactggagaggagtgggactcgatcatgtacaatggaatcatg
gctcatggtggacctcaatccccaggaattcttgtcagcatttacttcataattctgtat
ttttgtggaaacttcgttctcttgaatgtgttcttggctatcgctgtggacaatctagct
gaggctgagagtctgacagcagcacagaaagagaaagcagaggagaaagccagaagaaaa
ctcatgagaacattgccagagaaaagtgaggaggagaaggctctgatggctaagagacta
atggagtccaggtcaaaagctgagggaatgcccacaacagcaaagctcaagatagatgag
tttgaatcaaatgttaatgaagtgaaagaccccttccctcctgcagactttccaggtgat
gatgaggaagaggaaccagagatcccaatcagccccagacccagacccatggctgacctg
cagctcaaggagacagtggttcccatgcctgaggccagctccttcttcatctttgggcca
cagaacaagttccggaagctttgccacaggatcatcaaccacacgaccttcaccaacatc
atcctcctcttcatcctcctcagcagtatctccctggctgctgaagaccccatcgacccc
cattcattccgaaacaaggtcttggcttatgccgacattgtttttacgactgtcttcacc
attgaaattgtgctgaagatgacggtttatggagcgttcctgcataccggctctttctgc
cgaaactccttcaacattctggatctcattgttgtgggtgtttccctcttgtccatgggc
atggagtcgagtaccatctcagtggtgaagattctcagggtgttgagggtactaagacct
ctaagagccatcaacagagccaaagggttaaagcacgtggtccagtgtatgtttgtggcc
ataaagaccattggtaatattgtcctggtcaccatgctcttagacttcatgtttgcctgc
attggagtgcagctcttcaagggaaaattgtactattgtacggaccctcttcaaacaaca
gcagaggagtgtcagggaacatttttaaagcatgtgcaaaactctcttcatgacatggag
gtccatcagcgcaagtgggtcaacagcgatttcaactttgacaatgtgctgaatggcatg
ctggctctcttcaccatctccacatttgagggctggccagagatcctttataaggctata
gactcaaatgcagtagacacaggccctttgtacaataaccgggtgggcatctccatattc
tttatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgtgggcttcgtc
attgtcactttccaaaaacaaggagagcaggaatacaaggactgcgagctggacaagaac
cagcgtcaatgtgtacagtatgcactcaaagcacggccccttaaatgctacatcccgaag
aacccgcaccagtaccgtgtgtggtacttcgtgacctcctgttactttgagtatctcatg
ttctttctcatcatgctcaacacgctgtgtcttggaatgcagcactgcaaccagtccgat
cacataaccaaactctctgacaatcttaacctcatcttcactgtcctgttcactggcgag
atgatcgtcaaactcattgcattcaaagcaaagggttactttggagatccttggaacgtg
tttgatttcatcattgtggtcggtagtattgttgacgtggtcctcagtgaggttgatgct
gcgctggaggccagtggaggactgtggtgtctacatggttgtgctgaagtgaatccaatg
caggcaatagctgatgcagaaaatgtcagagtttccatcacgttcttccggctgttccgt
gtgctgcgtctcattaaactgctcaatcgttcagaggggatcaggaaccttttgtggacc
tttattaagtccttccaggcgctgcctcatgtgggtcttctcattgtcatgctcttcttc
atctatgctgtcatagggatgcagatgtttggtaaagttgctctggttgatgggacagag
attaaccgcaacaacaacttccaaacgttccctcaagctgtattgttattgttccgtgtt
gccactggagagcagtggcctaagatcatgctggcctcaatgtacgggaagctctgtgac
cccaaatcagactacggccctggagaggagtatacctgcggctccagcatcgctgtcttc
tacttcctcagcttttacatgctgtgtgcatttttggttatcaatttgtttgtggctgtc
attatgaacaattttgattacctcactcacgattggtcaatccttggcccacatcacctg
gatgagttcaagaggatctgggcagagtatgaccctgaagcaacgggacgaatcaaacat
ctggatgtagttactctcctgcggaggattcaaccaccgttgggttttggtaaattttgt
ccccaccgctcagcatgtaagcgcctgatttccatgaacatgccgctgaacagcgacggc
acagtgaccttcaacgccacactctttgcactggtcagaacagctttgaaaatcaaaact
gaaggaaactttgaacaggccaatgaggagctgagagccatcatcaagtcaatctggaag
aggaccagtatgaagttgttggaccaggtgattccgcccattggagaggatgaagtcact
gttggaaagttctatgcaaccttcctgattcaggaacacttccgcaagtttatgaagcgg
caggaggaatactacggttacaggcccaccaagaaaaatgctgatgagattaaggcaggt
ctgcgcagcatcgaggaggaagcagcacctgagctgcacagggccatctcaggtgacctt
atcgctgaggatgagatggagcgtgccttggaggccggagaggagggcatctacaggcgg
acaggaggtctgtttggactccacacagaccccttctcctctgagcccaacagccctctc
tccacacagatgaccagccagaggcccctgcagtttgtggagactcatttggaggatgta
gagtcacctcctgactccgtcttcctcccgaacactgtgttcttccctgataacatgcca
gcaaccaacaccaataacaatgccaacttcgctgaagatatgtcatccaggtttacattt
gaaagcgagtcactgtcagctgctgcaaccagaaactattcatacgaggacataagtgaa
aacagagactccagttcgtatgtgggcggggcctcaagcgttgatgacagacggctgtca
gatttcactgtgaggaccgatatcacacagttcccctttaacccctcatatggagcggca
aagaaccacagagaagcaacagaagcttcaccagccaccgacaaactcattcagcaggca
ctgagagacggtggtctagactccttggctgaggacccacagtttgtatatgtgactagg
aaggagctggcagaagccattaatattggtgtggaagatatggagggcatggctcagaga
attgttaacgggcagagcagcaaggtaacaaaacgtaaatgccgtcccatcccaattcca
cccggcaccgagtcaaccaaacccaaggaaaacactagtgcggtgtag
DBGET
integrated database retrieval system
