Cyprinus carpio (common carp): 109068336
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Entry
109068336 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109068336
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109068336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109068336
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109068336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
109068336
NCBI-ProteinID:
XP_042625238
UniProt:
A0A9R0B7U6
LinkDB
All DBs
Position
A13:complement(20812615..20817992)
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AA seq
284 aa
AA seq
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MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRKSRSVGSRYASIETVICCLLHYSS
DELTSTLLLYGPPVRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVE
FASHSDMKNAIDKLDGTDLNGRKLKLFEDRKRDRSRSRSRSRSSSRSRSPSRSRSPERGS
KRSRSRSPSRTPEKKTTSNRSPSRSPSPLRKQSRSRSASAESQH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtgttcatcggccgtctgagccctcatgctcgtgaaagagacgtg
gagaagttttttaaaggctacggacgcattcgggagattaacctaaaaaacgggtttggc
tttgtggagtttgacgaccacagggacgcagatgacgcagtgtatgagctgaatggaaaa
gagctgtgcagtgagagggtgaccattgaacatgcccgttctcgccgaggaagaggtgga
ggcccaggaatgggaggccgtttctctccacgctttggagggtatcgtaaatcccgcagt
gtgggttccaggtatgcaagtattgagacagtcatatgctgtttgttgcattatagttca
gatgagctaacctctaccctcctcttgtatggaccacccgtgcgcacggagcacagaatc
attgtggagaatctctcctctcgcatcagttggcaggatctgaaggacttgatgaggaag
gtgggtgaagtgacctttgtggatgcacacaggacaaagaagaatgaaggggtggtggag
tttgcttcacacagtgatatgaagaatgccatagataagctggatggaacagatctgaat
ggacgcaaactcaagctgtttgaggatcgcaagagggatcgtagtaggagtcgttcccgc
agcaggagcagctctcgttcccgctcgcccagtcggagtcgcagccctgagcgtggaagc
aagcgctcccgcagtcgctcacccagtcgcaccccagagaagaagactactagtaaccgc
tctccctcgcgctcaccgtctcctctgaggaaacagagccgctcccgatctgcctctgca
gagagtcagcactga
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