Cyprinus carpio (common carp): 109068380
Help
Entry
109068380 CDS
T05134
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109068380
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109068380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NOD2_WH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
109068380
NCBI-ProteinID:
XP_042599624
UniProt:
A0A9Q9XD53
LinkDB
All DBs
Position
A4:19721454..19753889
Genome browser
AA seq
1147 aa
AA seq
DB search
MTCINTPSVGKKHIPSAEQEKHRAKWCFLRSPLKTSRHTQKDNANLKMSLCEGRKEEEDV
VHYQNQRASSPEPSCVSLKSEESIGQPPNLCDGAVTFNPRDDQTRELLQNFHEPDDGKLQ
RVKDHHKTSMKDKYESLVEGSKLQETRTLLNRIYTQLYIIQGEREGVNEEHEVLQMEKTA
RTQDTQNTSINCNDIFKASPEPGCAEKDQIKTCLTKGIAGIGKTVSVQKFILDWAEGKAN
QDVDFMFVLPFRELNLIRDHQYSLQKLLLDFHPELQDLDSQIYEECKVVFIFDGLDESRI
SLMFSDTQKIWDVTETSSVAVLMSKLMKRDLLPSALIWITSRPAAANQIPSKYINRLTEI
QGFNDPQKEEYFRKRISDQHQASRIISHIRRAKSLHIMCHIPVFCWISSTVLHKLLEEDL
SAEIPQTLTEMYIHFLLIQINMKNQKYEERDPEKLLQSNQEVIVKLAEVAFNQLMKGNVM
FYEEDLIESGIDLTDASVYSGICTEIFKEESIINQRKVYSFIHLSFQEFLAAFYVFYSYV
VKNHEFLKLWAENYKYAHECGYNKQMFDELSLYGLLTTAVDQTLLSENGHLDLFLRFLLG
ISLESNQKLLQDLLTDTENSSETIRETTQYIKDEIKTNDSLSADRSINLFLCLLEVKDQT
LYQEIQDFVKSDKHSEKKLSPAHCSAIAYMLQMSDEVLDEMDLMKYNTSDEGRRRLIPAV
INCRKALLAGCGLSGQHCESLSSALQPSNSCLRELDLSNNDLRDSGVKLLSAALKSSYCQ
LNILRLNGCGLSDRHCEGLSSALQSSNSRLTELDLSNNDLQDSGVKMLSAGLKSSHCQLN
TLRLVICNLTGKCCESLSSVLQSSNSCLRDLDLSNNDLQDSGVKLLSVGLKSSYCQLNIL
RLSGCMVTEEGCGCLSSALTSNPSHLRELDLSYNHPGESGVKLLSEILSHPNCTLDKLNV
DHGGDFRITAGLHKYACDLTLDLNTANNHLIVSEENKKVIHVKEDQLYSDHPERFDECSQ
ILCRESLSGRCYWEAEWSGHDADMSVTYKCISRKGGSDDCWFGSNKNSWSLICSDFGFTV
RHNKKFTVLHVPLRSSKRVGVYVDMSAGTLSFYSISDTLTHLHTFSSTFTEPLYAGFVVC
EGSSVSL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcataaacacaccctctgtaggaaaaaaacacataccatcagcagaacaagaa
aagcacagggcaaaatggtgttttttgagatcgcctttgaaaacatcacgtcacacacaa
aaggacaatgctaacttaaaaatgagtctctgtgaggggagaaaagaggaggaggatgtt
gttcactaccagaaccagagagcatcatctccggagcccagctgtgtgtctttgaagagt
gaggaatccatagggcagcctcctaatctgtgtgatggagctgtgacctttaaccctaga
gatgatcagacaagagagctgttgcaaaattttcatgaaccagatgatggtaaactacag
agagtcaaagaccatcacaaaaccagcatgaaggacaagtatgagagcttagtcgaggga
agcaaattacaagagactcgaaccctcctgaacaggatctacacacaactctacatcatt
cagggagagcgtgaaggagtgaatgaagaacatgaggttttacagatggagaaaacagcc
agaacacaagatacacaaaacacttcaatcaactgcaatgacatatttaaagcctcacct
gaaccaggctgtgcggagaaagaccaaatcaagacttgtcttactaaaggcatcgctgga
attggaaaaacggtctctgtgcagaagttcattctggactgggctgaaggaaaagccaac
caggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatccgagatcat
cagtacagtcttcagaaacttctgctggactttcatcctgaacttcaagatctggactca
cagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagtagaatt
tcactgatgttttcagacactcagaaaatttgggatgtcactgagacttcatcagtggct
gtgttgatgtcaaagctcatgaaaagagacctgcttccctctgctctcatctggatcacc
tccagaccagcagcagccaatcagatcccctccaaatacatcaaccgtctgacagaaata
caaggattcaatgatcctcagaaggaggaatatttcaggaagagaataagtgaccagcat
caagccagcagaatcatctcacacatcagaagagcaaaaagcctccacatcatgtgtcac
atccccgtcttctgctggatctcatccactgtgcttcacaagctcctggaagaagatctg
agtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagatc
aacatgaagaatcagaagtatgaagagagagatccagagaaactcctgcagtccaaccaa
gaagtgattgtgaaacttgctgaagtggctttcaatcagctgatgaagggcaatgtgatg
ttctatgaggaggacctgattgagagtggcatagacctgactgatgcctcagtgtattct
gggatttgcactgagatctttaaggaggaatctattattaatcagaggaaagtctacagc
ttcatacatctgagctttcaggagtttctagctgctttctatgtgttttactcatatgta
gtaaagaaccatgaatttctaaaattgtgggctgaaaattataaatatgctcacgaatgt
ggatataataagcagatgtttgatgaattatctctgtatgggttactaacaacagcagtt
gatcaaacacttctgagtgaaaatgggcacttggatctttttttgaggttcctgctgggt
atttcattggagtccaatcaaaaactcttacaggatctactgacagacacagaaaacagc
tcagagaccataagagaaaccacacagtacattaaagatgaaatcaagacaaatgacagt
ctctccgctgacagatccatcaatctgtttctctgtctgctggaagtgaaagatcagact
ctgtaccaagagattcaggactttgttaaatcagacaaacactcagagaagaaactgtct
ccagctcactgctcagcaatagcctacatgcttcagatgtcagatgaggtgctggatgag
atggatcttatgaaatacaacacgtcagatgagggaaggaggagactaataccagcagtg
ataaactgcagaaaagctctacttgctggatgtggtctctctggtcagcattgtgaaagt
ttgtcttcagctctccaaccatcaaactcctgtttgagagagcttgacctcagtaacaat
gacttgcgggattctggagtgaagctactctctgctgcactaaagagttcatattgtcaa
ctgaacatactaagacttaatggatgtggtctctctgatcgacactgtgaagggttgtct
tcagctctacaatcatcaaattcccgtctgacagagctggatctgagtaataatgatttg
caggattcgggagtgaagatgctttctgctggactaaagagttcacactgtcaactgaac
actctgagattggtcatctgtaatctcactggtaagtgctgtgagagtttgtcttcagtt
ctacaatcatcaaactcttgtctgagagatctcgacctcagtaacaatgacctgcaagat
tctggagtaaagctgctctctgttggactgaagagttcatattgtcaactaaacatactg
aggctgtctggctgtatggtgacagaggaaggctgtggttgtttgtcttcagctctgact
tcaaacccctcacacctgagagaactggatctgagctacaatcacccaggagagtcagga
gtcaagctgctgtctgagatactcagccatccaaactgcacactagacaaactcaatgtg
gatcatggaggagatttcaggattacagcaggactacacaaatatgcctgtgatctcaca
ctggatctaaacacagcaaacaatcatctcattgtgtcagaggagaacaaaaaggtgata
catgtgaaagaggatcagttatattctgatcatccagagagatttgatgagtgtagtcag
attctgtgtcgagagagtctgtctggacgatgttactgggaggctgaatggagtggacat
gatgctgatatgtcggtcacatataaatgtataagcaggaaaggagggagtgatgattgt
tggtttggatccaataaaaattcttggagtctaatctgctctgattttggttttactgtt
cgtcacaataagaagttcactgtcttacatgtccctttgcgctcctctaagagagtagga
gtgtatgttgacatgtcggctggcactctgtccttctacagcatctctgacacactcaca
cacttacacacattcagctctacattcactgaacctctctatgctggatttgtagtttgt
gaaggttcctctgtatctttgtga
DBGET
integrated database retrieval system
