Cyprinus carpio (common carp): 109068743
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Entry
109068743 CDS
T05134
Symbol
supt6h
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109068743 (supt6h)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109068743 (supt6h)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109068743 (supt6h)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109068743 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
109068743
NCBI-ProteinID:
XP_042567405
Ensembl:
ENSCCRG00000031571
ENSCCRG00000037455
UniProt:
A0A9Q9VLW2
LinkDB
All DBs
Position
A21:13203571..13220116
Genome browser
AA seq
1711 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKKQKFMEDDEEEEEENTEDQDEHGNLRGLIDDGDVE
EEEPQSAVEDSDSGEEVRHRRRKRSCDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKTMD
DEEEDDEKDMIADEIFTGNGDRDGDVEDGETLDTLHPRDDEEEEDDEESDIDDFIVDDDG
QPITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDRPKK
QTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEEEA
EWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFIAF
YRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPLAD
STRPLDTADMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNAAKTNKKKLKKIKEVSEE
DGEEAEVEEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSY
QRHETEQFPAEPLELSKDYVCSQFNNPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERA
KINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLSIDICIDLV
GVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLV
TEAKDNIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGNYRDTPVFCSLLNGEG
EVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAGENRDAHMVMED
IKRTISELEQDSSLPAVGVELVDNELAMLYMNGKKSEADFRDYPPLLRQAVSVARKIQDP
LVEFAQVCSSDEDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQ
SLVQYICGLKPTKLPNLIKILKQNNTRLENRTQLVTMCHMGPKVFINCTDVMKXCRLSFS
STDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDL
DAFAEELETQGYGNKGITLYDIRAELSCRYKDLRAPYRPSNTEEVFNLLTKETPETFYIG
KLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQ
AIGVRTRLDNAVTGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKFNVDLTCRTS
DLSDKNNEWKLPKDTYYDFDAEADDVKQEEEQKKKQQRTTYIKRVIAHPSFHNINFKQAE
KMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINNEE
FEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRKKMEEILIRCKKEKPTFIPYYVSA
CRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQEPVPGVTP
TSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQGQNPNTTPAQWA
SSQYGYSGGSSAGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPGQQQAITTPQYPSS
TPQSSHGHHQHSSSTPSSSSSRVRTPQPKTSSHTAVDWGKMAEQWLQEKEAERRKQKTPR
MTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgagagcgaggctgaggagtcagaggaggagttcgaggagaaagac
ctgaagcccaaaaagaaacagaaatttatggaagatgatgaagaagaggaagaagagaat
actgaagatcaggatgagcatggaaacctgagagggctcattgatgatggcgatgtggaa
gaggaagaaccgcagagtgcggtagaggatagtgactctggtgaagaggtccgtcaccgc
cgcagaaaacgaagctgtgatgactatcttgatgatgatgatctggacctcatcgaggag
aatttaggagtgaaagtgaagagaaggaaaaagaagtactcgcgtgtgaaaaccatggat
gacgaggaggaagatgatgagaaagacatgatcgctgatgagatcttcactgggaatggt
gaccgagatggagacgtggaggatggagagactttggacacacttcaccctagagatgac
gaagaggaggaagatgatgaggaatctgatattgatgatttcattgtggatgatgatggg
cagcccatcactaaaaagaagggaaagaaattctctggctacactgatgctgctttgcaa
gaagctcaagagatattcggcggtgattttgactttgccgagttcgacactgaggcgtat
gatcatgcagaagaggaagaggaggatcaggatgatgagtcatgggatcggccaaagaag
cagaccaagagaagagttggccgccgtagcatatttgagatctatgagcccagtgagctg
gagagcagccacatgactgatcaggacaacgagatccgctctacagacatgccagaaaga
ttccagttgagggccatccctgtaaagcctgctgaggatgatgagctggaggaagaagct
gaatggatttacaggaatgccttctccacaccgaccatctccatgcaggagagcacagac
tacctagatcgtgggacaaccactaatttcagcagaaagggccccagtactattgctaaa
atcaaagaagctctgaacttcatgaggaaccaacactttgaggttcccttcattgcattc
tacagaaaggagtatgtggaacctgagctgaacattaatgatctgtggaaggtgtggcag
tgggatgagaagtggactcagctgaagaccaggaagcagaacctgacacgtcttttccag
aggatgcagtcttatcagtttgagcagatctccgctgaccctgacaagccactggcagac
tcaactcgtcccctagacactgctgatatggagaggctgaaagacgtccagtctcttgat
gagctgggagacgtctacaaccacttcctgctctactatggccgagacattcctaagatg
cagaatgcagccaaaaccaacaaaaagaaactgaaaaagatcaaggaagtgtcagaggaa
gatggggaagaggcagaagtggaggaggaagaggaagaagaggagcaaaagggtccagat
ctaaaacaagcttcccgtagagatatgtacagcatctgtcagagcgcaggccttgatggt
cttgccaagaagtttggtctgacaccagagcagtttggagaaaacttgcgagacagttat
cagaggcacgaaaccgagcagtttcctgcagagcctttggaactgtccaaggactacgtg
tgcagccaatttaacaacccggaggctgttctggaaggtgctcgctacatggtggccatg
cagattgcccgtgagcctctcgtcaggcacgtgctcagacagaccttccaggaaagggcc
aagattaacatcaagccaactaagaagggcaagaaggatgtggatgaagcgcactatgcc
tattccttcaagtatctcaagaacaagcctgtgaaagagctcagtggagatcagttcttg
aagatgtgcctggctgaggaggaaggcctgctctccatagacatctgcattgaccttgtg
ggagtcaaagggtacggaggagatcagacctactttgatgagattaagcagttctactac
agggatgagttcagtcaccaggtgcaggaatggaacaagcagagaactcttgctattgaa
cgatccttgcagcagtttctgtatcctcagatggcaaaggaactgaaaaacaagcttgtc
actgaagcaaaggacaatattgttaagtcttgctgcaagaagctgtataactggttgaag
gtggctccttatcggcctgaccagcaggtggaggaggacgatgacctcatggatgagtca
caaggaaaggggaattatagagatacaccagtgttctgctccctccttaatggtgaagga
gaggttgtggacttcctcaggcttccctacttcctgaagaggagaaatgcatggagagag
gatgaaagagagaaaaagcttcaagatattgaaaacctcaagaaattcctccttagtaag
aagccacatgttgttgctgttgctggggaaaatcgtgatgctcatatggtgatggaggac
atcaagcgcaccatcagtgagctggagcaggactcctctctgcctgcggtgggggtagag
ctggtggacaacgagctggctatgctttatatgaatggcaagaagtctgaggcggacttc
agagactatccgcctctgcttcggcaggctgtgtctgtggctcgcaaaattcaggacccc
ctagtggagtttgcccaagtctgcagcagcgatgaggacatcctgtgtttgaaactgcat
cccctgcaggagcatgtagtgaaagaggagctgctgagcgctctttactgtgagttcata
aaccgtgtgaatgaggttggtgtggatgtgaaccgggccattgctcacccttacacccag
agcctggtccaatacatctgtggcctaaaacccacaaaactcccaaacctgataaagatt
cttaaacagaacaacactaggttagagaaccgaacccagttggtcaccatgtgccatatg
ggacccaaagtcttcattaactgtacagatgtgatgaaataatgccgtctttcattctcc
agcactgactcctatatcgaggtcctggatggttctcgagtgcaccctgaaacgtacgag
tgggcacgtaaaatggcagtggatgctctagagtacgacgagtcagcagaagatgccaac
ccagccggagcgctagaggagatccttgagaacccagagaggctcaaggacctggatctg
gatgccttcgctgaggaactggaaactcagggttatggtaataagggaattacgctgtat
gacattcgagcagagcttagctgtagatataaagatttgagagctccgtacaggccttcc
aacacggaggaggtctttaacctgctcaccaaggagacacctgagaccttctatataggt
aaactgatcacctgtgtggtgactggcattgctcacagaaggccacaaggtgagagttac
gaccaggccatccgtaatgatgagaccggactctggcagtgtccattttgccagcaggat
aacttccctgagctcagcgaggtgtggaatcactttgacagcggctcctgccctggtcaa
gccatcggagtgagaactagattagataacgctgtcacaggcttcataccgacaaagttt
cttagtgacaaggtggtgaagcaccctgaggagagagtcaaggttggcatgactgtgcac
tgccgcatcatgaagattgacattgagaagttcaacgtggatctcacttgtagaacatct
gacctgagtgacaagaacaacgaatggaagcttcccaaagatacctactatgattttgat
gctgaggcagatgatgtgaaacaggaagaggagcaaaagaagaaacagcagagaaccact
tacattaagcgagtgatcgctcacccgtccttccacaacatcaacttcaaacaagcagag
aagatgatggaatccatggaccaaggtgatgttgtgattcgacccagcagtaaaggggag
aaccacctgacggtcacatggaaggtggctgatgggatatatcagcatgtggacgtgcgt
gaggagggtaaagagaatgcgttcagccttggacatactctttggatcaacaatgaggag
tttgaggatctggatgaaatcacagccaggtatgtccagcccatggctgcattcgcacga
gatctgctcggccacaagtacttccaggagtgcaatggaggtgataggaagaaaatggag
gaaattcttataaggtgcaaaaaagagaagccgacattcatcccctactacgtttcagct
tgtagagacctgccaggcaaatttctgctgggttaccaacctagagggaagccaaggata
gagtatgtaaccatcactccagatggctttaggtatcgctcacagatattccctacagtc
aatggtctcttccgctggttcaaggaccactaccaggaacctgtgccaggcgtcacacca
accagcagcagaacaagaacaccagcatcagtgaacgccacacctgccaacatcaacatt
gctgacttgactcgagccgtcaatgctctcccacgaaacatgacatcccagatgttcaat
gccatagcggcggttacaggacagggccagaatcccaacacgacgccagcgcagtgggcc
tccagtcagtatggttacagtggcggcagcagtgcaggaggaggtggcggcagcagcagc
gcttatcatgtgtttgcaacgccccagcagccaatggccacacccatgatgacgcccagc
tactcttacaccacacctggccagcagcaggccataaccacaccccagtatcccagcagc
accccacaatcctcacacggacaccatcagcattcgtcctccacaccatcatcctcgtca
tcaagagtgcggacaccacagcccaagacaagttcccacactgctgtggattggggtaaa
atggctgaacagtggctgcaggagaaagaagcagagcggcggaagcaaaagacgccccgc
atgacgccccgaccttcacccagccccatgatcgagagcacacccatgtccatcgccgga
gacgccactcccctcttggacgagatggaccgatag
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integrated database retrieval system
