Cyprinus carpio (common carp): 109068832
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Entry
109068832 CDS
T05134
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109068832 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109068832 (taf5)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109068832 (taf5)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109068832 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
109068832 (taf5)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109068832 (taf5)
STAGA complex
109068832 (taf5)
TFTC complex
109068832 (taf5)
SAGA complex
109068832 (taf5)
SLIK complex
109068832 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
RMC1_N
WD_LRWD1
Beta-prop_Nup120_160
VPS8_N
WD40_like
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
PROPPIN
LisH_TPL
LisH_PAC1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
109068832
NCBI-ProteinID:
XP_042617527
UniProt:
A0A9R0B011
LinkDB
All DBs
Position
A1:30395093..30402886
Genome browser
AA seq
751 aa
AA seq
DB search
MTPLLSAPGKMAAVQDGPMELDTEKETKPEILSDGTSKLSGNAASGTLSSSPLTAGGAPK
QEDQQTLIAVLQFLRRNKLSESVEILRREAGLEDQEDSQTLDGSGGGKGDRDGGEANSLL
SRVSITSAAAPQSTLTPITVKRANEQLDVSVVLSAYSQQGDPSLYQVYYSGLKNFIESVL
DCHRAELSQLFYPLFVHMYLELVYNNHENEAKAFFEKFGGDQECYYQDDLRVLCGLTKKE
HLKGNEVLLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSK
SQIDSMSGSFAGEARREVNKVKVFHGLLKEPEIEVPLDDEEDEAENEEGKPKKKKTKKDS
MGSKSKKQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLGPENLPSICFYSFLNA
YQGLTAVDFTDDSSLLAGGFADSTVRIWSVTPKKLRKVKSAGELNLIDKESDDVLERIMD
EKTASESKILCGHSGPVYSVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTHFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDR
TIRLWDVLNGNCVRIFTGHKGPVHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKG
HTDTIYALKFSRDGEILASGSMDNTVRLWDSTKAFDDVETDDFTAATGHIHLPDNSQELL
LGTYHSKSTPVTHLHFTRRNLLLAAGGYSSQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacgccattgctttcagcgccaggaaaaatggcggctgtgcaagatggaccgatggag
ctggacacagagaaagagacaaagccagaaatcctcagcgatgggacgtcaaagctctcg
gggaacgcagcgagcgggacgctgtcctcatcgcccctcaccgccggcggagccccgaag
caggaggaccagcaaactttgatcgcagttctgcagtttctcaggcggaataagctgtcg
gagtcggtggagattctgcggcgggaagccggtttagaagaccaggaggactcacagact
ctcgatggcagcggaggagggaagggtgacagggatggaggggaggcaaactctctgctc
agccgggtgtccatcacatcagcagccgccccccaaagcaccctgactcccataacagtc
aagagagctaatgagcagctggatgtcagtgtggtgctgtcagcgtacagccagcagggg
gatccctctctgtatcaggtgtactacagcggtctgaagaacttcatcgagtccgtgctg
gactgtcaccgagcggagctgtcccagctcttctaccctctgttcgttcacatgtacctg
gagctggtctacaacaaccacgagaacgaagcaaaggctttctttgagaagttcggtggg
gatcaggagtgttactatcaggatgacctgcgcgttctctgcggcctcactaagaaagag
cacctgaaggggaacgaggtgctgctggacttccgcaccagccgcttcgtgctgcgcatc
tcccgagactcgtaccagctgctcaagagacacttacaggaaaggcataataaccagata
tggaacatcattcaggagcacttgtacatcgacatctttgacggcatgccgcgcagcaaa
agccagatcgacagcatgtccggcagttttgcgggagaggccagacgagaagtcaataaa
gtcaaggtattccacgggctgctaaaggagccagagattgaggtcccgttagatgatgaa
gaagatgaagcagagaatgaggaagggaagcccaagaagaagaaaaccaaaaaggacagt
atgggctccaagagtaagaaacaagaccccaatgctcctcaacagaacaggatccctctg
ccggagctgaaggactcagacaaactggacaagatcatgtacatgaaggagagcaccaaa
agaatccggctcggcccggagaacctgccttccatttgcttctattcgttcctcaacgcc
taccagggtttgacggcagtagacttcactgatgactcgagtctgttagcgggagggttt
gcagactccacagtccgcatatggagcgtcacacctaaaaaattacgcaaggtcaaatct
gcaggagaattgaatctgattgataaagagtctgatgacgttctggagaggatcatggat
gagaagacggccagtgagtcaaagatcctctgcggtcacagcgggccggtgtacagtgtc
agcttcagtccagacaggaactatctgttgtccagttctgaggacggtacagtccgactg
tggagcctgcaaacgtttacgtgtctcgtggggtataaaggacataactatccagtgtgg
gacacccacttctcaccctttggttattactttgtgtctggaggacatgacagagtagca
cgcctctgggcgacggatcattaccagcccttgcggatatttgctgggcatctggctgac
gtcacctgcacgcgattccaccccaactctaactatgtggccacaggctcgaccgaccgc
actatacgcctctgggatgtcctgaatggaaactgtgtccgcattttcacaggtcacaag
ggccctgtccactctctagcgttctcacccaatggaaagttcctggcatctggatccaca
gacgggagagttttactatgggatattggacatggactgatgatcggagagctgaagggt
cacacagacacaatttatgccctcaagttcagcagagatggagaaatcctcgcatcagga
tctatggataacaccgtgcggctatgggactccacgaaggctttcgatgacgtggagacg
gacgacttcaccgcagcgacgggccacattcacctgccggataactcccaggagctgctg
cttgggacgtatcacagcaaatccacaccggtcacccacctccacttcaccagacgcaac
ctgctgctggccgcaggcgggtacagctcccagtga
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integrated database retrieval system
