Cyprinus carpio (common carp): 109069081
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Entry
109069081 CDS
T05134
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109069081 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109069081 (taf6l)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109069081 (taf6l)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109069081 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
109069081 (taf6l)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109069081 (taf6l)
STAGA complex
109069081 (taf6l)
TFTC complex
109069081 (taf6l)
SAGA complex
109069081 (taf6l)
SLIK complex
109069081 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
109069081
NCBI-ProteinID:
XP_042583059
Ensembl:
ENSCCRG00000016337
UniProt:
A0A9R0A2I9
LinkDB
All DBs
Position
B7:complement(9570896..9578334)
Genome browser
AA seq
640 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESTGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
IDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLAAEGSSAGLPGTTTGAVGFRENSPGLSPPPEPLSEPPLGIA
SHLQAGGAGCQWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLGGAPPPGPCQPLEGR
KEPASSAPNLENTRKMPQLTASMNISPRQDGSPRMEPQPPSLAATVPGRSLSRSSSLSSV
SRSRSSSSRPGRSTSQSRDIFPKSRFPLPQAGPPAFSFIIGGRQMGRRCLGRRFQTSFTP
TPPLTTLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagagaggaacggcgcttcgcggaggtgccccgagaatccatcaaactaatg
gccgagagcaccggagtggaactcagcgaggaggtggcagctctgctggcggaggatgtg
tgctaccgcctcagagaggcaacacagaacagctcacagttcatgagacatgcaaagaga
aggaagctgagcgtggaagacttcaacagagcgctacggtggagcaatactgagactgtt
tgtggctatggtgcacaagatgccctaccgttccgtccattaaaggaaggagagcttttc
tttgttgaggatcgggagataaatctggttgagttggcacttgctactaacatccccaaa
ggctgtgcagagacgatggttcgagtgcatgtgtcatatcttgatggaaaaggcaacctg
gaacctcaaggcacagtgcccactgctgttcagtctctatcagaggatctgctgaagtat
taccaacaaataacacgagccattttaggagaggacccacatctcatgaaggtggctttg
atagacctccagtccaattcaaagatcgctgccctcctgccttactttgtttatgtcatc
agtggggtaaagtcagtaagtcatgatctggaccagttgaacagactcctgcacatggtg
aagagtttggtgcagaacccgtacctgtacctgggctcatacgtgcgcagtctggtgtcc
agtgtcatgtactgcatcctggagcctctggctgcttccatcaaccccctcaatgaccac
tggaccctgagagactatgcagcccttctgctcagccacatcttctggacacatggtgat
cttgtgagtgggctgtaccatcagatccttctgtctctgcagaaggttctctccgatccg
gttagacctctctgttcccactatggagctgtagtgggtctgcatgctctcggctggaag
gctgttgaacgtgtgctgtatcctcacctccctgcctactgggcgaatctacaagcggtg
ttagatgattactccgtgtccaacgctcaggtgaaagcagacggccataaagtctatgga
gccattttggtggcggtagagcgtttgctgaagatgaaggctctcagtctgaccttggca
gcagaaggaagcagtgctggtctaccaggcactaccacaggggctgtcggcttcagagaa
aactcgcctggcctcagcccacctcccgagcctctttcagaaccccctcttggtattgca
agccatctccaagcaggtggagctggctgtcagtgggaagagtggactcctgtatctctt
cctgccatgtactgtgaactctactccttttttggagacagtctggctgtacgcttcagc
actgacccgccactaggtggtgccccacctccaggtccctgccaaccactagagggcagg
aaagagccagcaagcagtgcccccaatcttgagaatacacggaaaatgccccagctaact
gccagtatgaatataagcccacgacaagatggaagccctcgtatggaaccacaaccacct
agtctggctgctaccgtcccagggagatctctttcccgctcctcctccttatcttccgtc
tcacgttccaggtcatcttcgtcacgtcctggtcgttcgaccagccaatcccgagacatt
ttccctaaatcccgcttcccgctgcctcaggctggacctcctgctttttctttcatcatt
ggcgggcggcagatggggcgacgctgtctgggacggcgcttccagacaagctttactcca
actccacctcttactaccctcccacctcgtgcttatgcccacaagctaccggtcataggg
agagtcagcaaacctgtgcgccgatggacgtgttcccattactcacttcacctgccgctt
taa
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