Cyprinus carpio (common carp): 109069100
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Entry
109069100 CDS
T05134
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109069100
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109069100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
109069100
NCBI-ProteinID:
XP_042599050
UniProt:
A0A9R0AI94
LinkDB
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Position
A4:16687022..16715224
Genome browser
AA seq
1766 aa
AA seq
DB search
MWILQITAFTISIALHALAQSPDHNDKCGEGSCYPATGDLLIGRAHRLTASSTCGLDRPE
TFCIDNKNCFECDSRRMYNEFNNPNSHTIENVVTTFAHNRLKTWWQSENGVENVTIQLDL
EAEFHFTHLIMTFKTFRPAAMLIERSADYGQSWQVYRYYAFDCAESYPNVPRGPIRKVDD
VICDSRYSGVKPSTEGEVIFRALAPSFNIPDPYSPRIQNLLKITNLRIRMEKLHTQVDDL
FDEHERVKEKFYYALYDMVVRGNCFCYGHASKCAPVGNEAGVEGMVHGHCMCNHHTTGLN
CEECEDFYHDLPWRPAVGRETNACKRCECNYHSHSCHFDMAVYLSSGNRSGGVCDDCQHN
TEGQWCENCKPFYYKHPGRDIRDPRICEPCDCDPRGSQNGGLCDSATDVLRDMIAGQCRC
KANVEGQRCDHCKKGHYGLSDDPLGCQPCSCNPLGTLTKGSPCDIQTGNCYCKRLVTGRN
CDLCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVHSGYYI
AALDHYIYEAEDASFGPEVKVVQRPLPLDRKPTWTGNGFVNIPEGETLRFNIYNLPRSME
YNLMIRYEPLLPDEWEKVVVQIERPRGTYPSAHCTSTNNVVQTISLHPGSRYVVLPDPVC
LEKGQNYTVNINFPQYSSYSYHTSPSTLVDSIVLLPEVQDLDLFSGGHQQREDWEMFQKY
RCMERSQSVIEIPLTDICKDFIFSVSALLHNGALECKCDPQGSLSTVCDSIGGQCQCRPN
VLGRNCDTCAPATYLFGPSGCRPCDCNPLGSQNPFCHPMTGQCLCVPGAYGRQCGNCKPN
HWGFPQCQPCFCNGKSEQCHTVTGECLNCRGHTTGHNCERCESGYHRNTLLGSSESCRPC
MCPNGPGSGMQFAESCYQNPNSLQMLCVCNSGYKGLKCEECASGYYGNPQVPGGRCHPCQ
CNGNINMQDPESCDARTGACLKCLFHTDGNACQYCSRGYYGDARTQNCRKCMCHLVGSYR
QSCVDGLCECDRVSGQCPCLPGVVGQHCDRCAPNTWNINSGKGCQPCQCHPEHSYTASCD
LLTGECSCKPGFGGRTCEECRELFWGNPEVQCDACDCDPRGIATQQCNKMTGECVCVEGV
AGRRCDSCGRGYVGTFPDCEACHHCFREWDVNVGELNNHTQRLVDTVEEMKETGVATPYK
DIISSLDDETSQLRQILEDDKVQQTLTHTQRMLQQANETASVLRKSMDRSEKDLENVSAD
HQQAVENLKNLTEEAQNLKEISSDKQQQVLNIKHSDPRGALDSIRGYYKESGEAELRINR
AVSDPKSMVKESALIRKAAEAKLDSTEKEFNLKHQLHIQRLDKIGSELDSTDLSQLSRQL
CGGASGLDGCGKCGGLGCVSEEGTSQCGGEGCETIVTQIQETLNKVKNQDVLHTLGEVDK
LNKMVSDARGHADEAKLNAQGVLLRANQSKARVEQTNEELRDLIQQIRDFLTNETDPKRI
EEVADEVMKLSVPVSVPGALKNVTTEIRQHVARLTQVDDILTQTAENARAAERLLQEAQA
ANERATALKQATDEVKETLEDTEHAQTAASEKLKQVQSDLNETKQQITEVQSKTEATEFK
LSSSTGKSLDLEREVDELQQKTLETSSSADQTQRQTDNIKAEIEHTEQEFDSPVQTKYKS
ISGLIDQKGAVVFNAHQKAEQLRQEAKDLLMDATKKLQRLRELERSFEINQHILVEKAQE
MDRLESEARDVLQELSQKTTIYSTCA
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctccagattacagcttttacaatatctattgctttgcacgctctggcacaa
tcacccgatcacaatgataagtgcggagaggggagttgttaccctgctacaggtgatttg
ctgatcgggagagcacaccggcttacggcctcctccacctgcggactggatagaccagag
acattctgcattgacaataaaaactgttttgaatgcgattcccgacggatgtacaatgag
ttcaacaaccccaacagccacaccattgagaatgtggtgacaaccttcgctcacaaccgc
ctcaaaacctggtggcagtccgagaatggagttgaaaatgtgaccattcagctggatttg
gaagccgaattccacttcacacacctcatcatgacctttaagaccttccggccagcagcc
atgctgattgagcgttcggcagattacggacagagctggcaggtgtatcgttactacgct
ttcgactgcgctgaatcctatccaaacgtccctcgagggccaatcagaaaagttgatgat
gtcatttgtgacagccgctattcaggtgttaagccatcaacagaaggagaagtcattttt
agggcacttgctccttcttttaatattcctgacccttacagcccacgaattcagaaccta
ctgaagatcacaaacttgcgcatacggatggaaaagttgcacactcaagttgatgatctg
tttgatgaacatgagagggtgaaagagaaattctattatgctctctacgacatggttgtc
cgtggcaactgtttctgctatggccacgcctccaagtgtgcaccagtcggcaacgaggca
ggggtcgagggcatggttcatggtcattgcatgtgtaatcaccacaccactggactgaac
tgtgaagagtgtgaggacttctaccacgatctgccctggagaccagcagtgggccgagag
acaaatgcttgcaagagatgtgagtgtaactatcactcgcattcctgtcattttgacatg
gcggtgtatctgtcatcgggaaatagaagtggaggagtgtgcgatgactgtcagcacaac
acagagggccagtggtgtgagaactgcaaacccttctactacaagcaccctggcagggac
atcagagaccccaggatctgcgagccctgtgattgtgacccacgtggttctcagaacgga
ggcttatgtgacagcgctacagatgttctaagagatatgattgccggacagtgccgttgc
aaagctaatgtggagggacaacgatgtgaccactgtaaaaagggacactatggcctcagt
gacgacccattgggctgtcagccatgcagctgtaatcctctagggacactcacaaaagga
agcccctgtgatatacagacaggaaactgttactgcaaacgtcttgtgactggacgaaac
tgtgacctatgtctgccacagcactggggtcttagtaatgatatggatggctgcagacca
tgtgactgtgacgtgggtggggctttgaataataattgttctcgggagacagggcagtgt
gcttgtaagaaacatatgtttggtaggcgttgtgaccaggtgcattctgggtactacatt
gcagcactggaccactatatttatgaagctgaggatgcttcgtttggaccggaagtaaaa
gtggttcaaagaccattacctttggatcgtaaacccacctggacaggtaatggatttgtg
aatataccagagggtgaaacactgaggttcaacatttacaatttaccacgatctatggaa
tacaacttaatgatccgctatgaaccactgttgccagatgaatgggagaaagttgtagta
cagatagagcgccccagaggcacttacccatcagcacactgcacttctacaaacaatgtt
gtgcagaccatctcactgcaccctggatccagatatgtagttctgcctgatcccgtgtgt
ttggagaagggtcagaattacacagtgaacattaacttcccacagtactcatcatacagc
tatcacacttctcctagtacacttgttgattcaatagtgcttttgccagaggtgcaagac
ctggatttattttctgggggacaccagcagcgggaggactgggagatgttccagaaatac
agatgtatggaacgcagccagagtgttattgaaatccccttaacggatatttgcaaagac
tttatcttcagtgtgtcagcactgctgcacaatggagctctagagtgtaagtgtgacccc
caaggttctctgagcacagtgtgtgacagtatcggtgggcagtgtcagtgtcgacccaac
gttttaggtaggaactgcgacacctgtgccccggccacctacctgtttggaccctcagga
tgtagaccgtgtgactgtaacccattgggctctcagaaccctttctgccaccccatgacg
ggccagtgtttatgtgtgccaggggcatacgggcgccaatgtggaaactgtaagccaaac
cattggggcttccctcagtgccagccctgcttctgtaatgggaagagtgaacagtgccac
acagttacgggcgagtgtctgaattgcaggggtcacaccacaggccacaactgtgagagg
tgtgaaagtggttatcaccgtaacacgctgctgggctccagtgagtcgtgtcgcccttgt
atgtgtcctaatggacctggaagtggaatgcagtttgctgaaagctgttaccaaaatccc
aactctctccaaatgctctgtgtctgcaactcaggctacaaaggacttaagtgtgaggaa
tgtgcctctggttactatggtaaccctcaggtaccaggagggcgttgccatccgtgtcag
tgtaatggaaatattaacatgcaggatcctgaatcatgtgatgcccgcactggtgcctgt
ctcaaatgcctatttcacaccgatggtaatgcatgccaatactgcagtcgtggttactat
ggagacgcccgtactcagaactgcaggaaatgtatgtgccatctcgtgggaagttacagg
caaagttgtgttgacggcctgtgtgagtgtgacagggttagtgggcagtgcccatgtctg
cccggtgtggtggggcagcactgtgaccgctgtgcccccaacacatggaacatcaacagt
ggaaaaggatgccaaccttgccagtgccaccctgagcattcttacacagcctcctgcgac
ctgctgaccggtgagtgttcctgtaagcctggttttggaggcaggacatgtgaggagtgc
agggaactgttctggggcaatcctgaggtccagtgtgacgcatgcgactgtgatccacgt
ggcattgccactcaacagtgtaataagatgactggcgagtgtgtgtgcgtagagggcgtg
gccggccggaggtgtgactcatgtggacgtggctacgttgggacctttcctgactgcgag
gcctgtcatcattgtttccgcgaatgggatgttaatgtgggagagctgaacaatcacacg
cagagactggtggatacagtagaggaaatgaaagagactggtgtggctacgccctataaa
gacatcatatcgagtctggatgatgaaaccagtcagctcagacagattctggaagatgac
aaggttcagcaaacgctcacacacacacagaggatgctgcagcaagccaatgagacagca
tcagtcctgagaaagtctatggaccgatctgaaaaagatctggagaatgtatctgctgac
catcagcaggctgtggagaaccttaaaaacctgactgaggaggcccaaaacctgaaagag
atctcctctgataaacagcagcaggttctgaacatcaaacattcagaccccagaggtgcg
ctggacagcatcagagggtattacaaggaatctggcgaggcagagcttcgcatcaataga
gcagtctctgacccgaaaagtatggttaaagagtctgccctgataaggaaagctgcagag
gccaaactagacagcacagagaaagaatttaacctgaagcatcagctgcatatacagaga
ctggacaaaattgggtctgaactggactccacagacctttcacaactaagccgtcagttg
tgcggaggggcatccggtctagatggttgcggcaagtgtggtggtctgggatgtgtgagc
gaggagggcacgtcccagtgtggtggggaaggatgtgagaccattgtgactcaaattcaa
gagaccttgaacaaagtcaaaaaccaagatgtcctgcacactttaggagaagtagacaag
ctaaacaagatggtgtcagatgctcgaggacatgcagatgaggccaagctcaatgctcag
ggtgtgttactgagagccaatcagagcaaagcacgagtggaacagaccaatgaggagctc
agagacctcattcagcaaatacgagacttcctcacaaacgaaactgatccaaagcgtata
gaggaagtagctgatgaggtgatgaaactgagtgtgccagtgtcagtgcctggtgcacta
aagaacgtgaccacagagatccgccaacatgtggccagactgacccaggtggatgatatt
ctgacccagacggcagagaatgcgcgcgctgcagagagactcctgcaagaagcacaggct
gccaatgagagagctacagctctgaaacaggccactgatgaggtgaaggaaactctagag
gatactgagcatgctcagactgctgccagcgaaaaactgaaacaggtgcagagtgactta
aacgaaacaaaacaacaaatcacagaggtacaatcaaaaactgaagcgactgagttcaaa
ctgagtagcagcacaggaaaatctctggatcttgagagagaggttgacgaactccaacag
aaaactctagaaacgtccagtagtgcagatcaaactcagagacaaactgataacatcaaa
gcagaaatcgagcacacagaacaggagtttgactcacctgtgcaaaccaagtacaaatct
atcagtggtctgatagatcaaaagggagcagttgtgtttaatgctcatcagaaggctgag
caactccgtcaggaggcaaaagatctattgatggatgccacaaaaaaactacagagacta
agagagttggagagatcatttgagataaatcaacacattctggtggagaaagctcaggag
atggatcggctggagagtgaggccagagatgtactgcaagaactcagtcagaaaaccacc
atctacagcacctgcgcttaa
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integrated database retrieval system
