KEGG   Cyprinus carpio (common carp): 109069140
Entry
109069140         CDS       T05134                                 
Symbol
cul5b
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-5
  KO
K10612  cullin 5
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109069140 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109069140 (cul5b)
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109069140 (cul5b)
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     109069140 (cul5b)
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109069140 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 WHD_Storkhead HMD
Other DBs
NCBI-GeneID: 109069140
NCBI-ProteinID: XP_042566781
Ensembl: ENSCCRG00000007007 ENSCCRG00000046721
UniProt: A0A9Q9ZMX3
LinkDB
Position
A21:11300016..11307650
AA seq 787 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPSK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCKLEITLLG
NQGSNKKSNFXYLTEYFTYFLMLDTWNESIFCNIKNRLQDSAMKLVHAERLGEAFDSQLV
IGVRESYVNLCSNADDKLQIYRENFEKSYQDSTERFYKTQAPSYLQQNGVQNYMKYADGK
LREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETEKLHLMF
SLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTDSEKYVEQLLTLFNRFSKLVKE
AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR
KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV
EWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILNAGAWS
RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSKVTITFKNEVGQYDLEVTT
FQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPGVGSP
KDFAEGTVFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEXKHQHMKLITQI
IKCEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEQKYIKRDETDI
NTFIYMA
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaataaaggctccctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagtcagttactaagcagcagtgg
ttcgatttgttctcagacgtccatgcagtgtgtttatgggacgacaaaggtccgtcaaag
attcaccaggctctgaaagaagacatcctagatttcatcaagcaagcacaggcacgagtg
ctcagtcatcaggatgacactgctttgcttaaagcttacattgtggagtggaggaagttc
ttcacacagtgtgatattctacctaagcctttctgcaagttggaaatcaccctgctgggc
aaccaggggagcaataagaagtccaatttctaatatttgactgaatacttcacatatttt
cttatgctggacacatggaacgagtctatattctgtaatataaagaaccggctccaggac
agtgccatgaaactggtccatgctgagagattaggagaagcattcgactcgcagcttgtc
atcggagtgcgggagtcatatgtgaacttgtgttccaacgctgatgacaagctccagatc
tatcgagagaattttgagaaatcatatcaagattccactgagaggttctacaagacacaa
gcaccttcctatttgcaacagaacggcgttcagaactatatgaaatatgcagatggcaag
ttaagagaagaagagaagcgtgcgcttcgatatctggaaaccagacgtgaatgtaactcc
gtccaggcactaatggagtgttgtgtgaatgcactggtgacatcgttcaaagaaacaatc
ctggccgaatgtccgggaatgatcaagcggaacgagacagagaagctgcacctcatgttc
tcgctgatggacaaagtgcccagtggtattgagccaatgctaaaggacttggaggatcat
atcatgagcgcaggtctggctgatatggtggcctcagcagaaaccattaccacagactct
gaaaaatatgttgagcagctcctaacattgtttaaccgctttagtaaattagttaaggaa
gcattccaagatgatccacgtttcctaacagccagggataaagcatacaaagcagtagtg
aatgacgcgacaatatttaaactagagctccctctaaaacagaaaggtgtgggtctgaaa
actcaaccagagtccaaatgtccagagctgctggccaactactgtgatatgctccttaga
aagactccattgagcaagaaactcacctcagaggaaatagaggccaagctgaaggaagtg
ctcttggttctaaagtatgttcagaacaaagacgtcttcatgaggtaccacaaagcgcac
ttgacccgtaggctaattcttgacatttctgcagacagtgagattgaagagaacatggtg
gagtggctcagggaggttggtatgccagcagattacgtgaacaagctcgccagaatgttc
caggacatcaaagtatcagaagacttaaatcaatccttcaaagaaatgcacaaacacaac
aaacttgcattaccagctgactcggtcaatataaagatcttgaatgcaggagcatggtct
cggagttcagagaaagtgtttgtatccctgcccaccgaactagaagatctcattccagaa
gttgaggagttttacaagaaaaatcacagtggcagaaaattacactggcaccatttgatg
tccaaagtaacaatcacattcaagaatgaagtcgggcagtatgatttagaagtcacgaca
ttccagttagctgtgctgtttgcctggaaccaaaggcccagagagaggatcagctttgag
aatctgaaactagccacggaacttccagacgctgagctgcgccggactctctggtctctt
gtagctttccccaaactaaagcgtcaggtgctgtcatatgaacctggggtgggctctcct
aaagacttcgcagaaggcactgtattttacatcaatcaagagttttctttaataaaaaac
tcaaaggtccagaaaagagggaagatcaatttgattggtcgattacaactcaccacagag
agaatgcgtgaagaagaaaatgaatgaaaacaccaacacatgaaattaatcacacaaata
attaaatgtgaagctatcattcagatcatgaagatgaggaagaggatcagcaatgcccag
cttcagacggagctggtggagatcctaaagaacatgtttctgccccagaaaaagatgatc
aaagagcagatcgagtggctgatagaacaaaaatacatcaaacgggacgagacggacatt
aacacatttatctacatggcgtag

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