Cyprinus carpio (common carp): 109069217
Help
Entry
109069217 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109069217
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109069217
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109069217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-C3HC4_4
WEMBL
Fez1
Crescentin
FmiP_Thoc5
Zn_ribbon_8
zf-RING-like
Lzipper-MIP1
zf-RING_16
DUF2968
ATG14
zf_RING_Vps8
HIP1_clath_bdg
Gp58
T3SSipB
KxDL
RINGv
COG3_N
ATG16
MAD
DUF948
FANCL_C
KASH_CCD
MscS_porin
FapA
RING_XB3-XBAT31
GAS
LRRFIP
APC_N_CC
CENP-F_leu_zip
zf-UDP
DegS
CCDC113_CCDC96_CC
SLX1_C
Sec3_CC
Prok-RING_1
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
109069217
NCBI-ProteinID:
XP_042589815
Ensembl:
ENSCCRG00000014720
ENSCCRG00000017911
UniProt:
A0A9Q9WUI3
LinkDB
All DBs
Position
B11:10539511..10544624
Genome browser
AA seq
452 aa
AA seq
DB search
MPIRAYCTICSDFFDNSKDVAAIHCGHTFHYACLLQWFQSAPNKTCPQCRKQVSTRHIIN
KLFFDIAPEDDGTPVDPESLQNELDRMKAVLSVKEKEWRDKQKSVDTLKDTIERQKKDLD
RLRKEVGDKEMLCSVLRKQMNFLESQKNEGQAAKEEAKRLRVKMKTYESLDVVLQGQRSE
VEAMITDMGVGQSAVEQLSIYCISLKKEYDNLKGSLKSSNEMCEKLKRELISSNSKLQKA
TTETNRTKEDMKALQNDLSNADKEITSLKKKVEILQRTLSTPTRTNEAISRLVFESPAPL
ELKPPGHGPMTDSQEIDLNLTFDINTPEQVEKKPVQVPSKKMRLDPSAPSFKNTENALGH
SNARVKDDVMMGPMLRNSLLFRKNAFGSMLDPCKFGTVRSGYDGLGGRAKFIQPSPLSEI
RPLAMKSKRKKVSRPVTSKPTSSLTTLDGFLE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcgagcatactgcaccatctgctcagatttctttgataattccaaagatgtg
gctgcaatccactgtggtcacacttttcattatgcctgtcttctccagtggtttcagtcg
gccccgaacaaaacctgtccacaatgcaggaaacaggtcagtacgcggcacattatcaac
aaactgttcttcgacatagcaccagaggatgatgggacgccagtggatcctgagagttta
cagaatgagcttgatcgcatgaaagcagtgttgtctgtaaaagagaaagaatggagggac
aagcagaagtcagtggatacactaaaagacacaattgagaggcagaagaaggacctggat
agactccgcaaggaagtcggagacaaagagatgttgtgttctgtcctccggaaacagatg
aatttcttggagagtcagaaaaatgaagggcaggcagccaaagaggaagccaagcgactc
cgagtcaaaatgaaaacctatgagagtttagacgtggtcctacagggtcaaaggtcagag
gtagaggccatgatcactgatatgggagttggtcagtctgctgttgaacagctgtccata
tactgcatctcacttaaaaaggagtacgacaatctgaaaggaagcctcaagtcatcaaat
gaaatgtgtgagaagctaaaaagggaactgatctcttctaacagcaagttgcaaaaagct
actacagagacaaacaggacaaaggaggacatgaaggcacttcagaacgacctgtccaac
gcagacaaagagatcactagcttgaagaagaaggtggaaattcttcagcggacgttaagt
actccaactcgcactaatgaagccatcagcagactggtcttcgaaagccctgctcctctg
gagctgaagcctcctggacacggtccgatgacagactctcaggaaattgacctcaacctg
accttcgacattaacacacctgaacaggttgagaagaaacctgttcaggttccatctaag
aagatgcgtttggacccttccgcgccctcattcaaaaacacggaaaatgcgctcggacat
agtaacgctcgtgttaaagatgatgtcatgatggggcccatgttaaggaactcgttgctc
ttcagaaagaatgcatttgggagcatgctggacccatgcaaatttggcactgtaagatct
ggctatgatggacttggaggaagagccaaatttatccaaccttctcctttatctgagatt
cgacccctcgccatgaagtccaagaggaagaaggtctccaggcctgttacaagcaagccc
acctccagtctgaccactctggatggtttcttggaataa
DBGET
integrated database retrieval system
