Cyprinus carpio (common carp): 109069377
Help
Entry
109069377 CDS
T05134
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109069377 (rnf40)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109069377 (rnf40)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
109069377 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
BRE1
CC_Bre1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
109069377
NCBI-ProteinID:
XP_042591573
Ensembl:
ENSCCRG00000030924
UniProt:
A0A8C2AL19
LinkDB
All DBs
Position
B12:16094284..16126740
Genome browser
AA seq
1013 aa
AA seq
DB search
MSKKGSMSGAGGGKRPTGGDSPPGPPEKKLKKEEKTTTTLIEPIRIGGVSSTEEMDMKVI
QFKNKKLCERLEQRQALEDELREKIEKLEKRQATDDTTLLIVNRCWTQLEENIHELLQRV
EPKDTPEPVQTPATPPVPDVPVPAAAPSSAPEPSAPLPAPIEGEVGLPQAPPSAEALDEE
QQQLVQEKEQTQEQEQQQQVPDSVEKSADEPVQDGIPAPRPPPSLSESAKTFLATLDNSS
EEELTLHLQDRMQFSKGAVACMVCIFDRLHTTIDELCTRVQSAVCEDDSQREIIATNRTL
LEEHNRLQDLAYSLQGKHHKMSLEYNELIDKVTSSETKVSEMETAVEDLQWDIEKLRKRE
QKLNKHLAEALEQLNSGYHATGSSGGLPGGQITLSIQKFESLNAELEQNQELANSRMAEL
EKLQQELQEAVRESEKLKMDLRNIPEEVLKETPEYKCLQSQFSLLYNESLSVKTQLDEAR
ALLLTAKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAAN
EQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLRERQMEINKLKCQSGEAGALMLEES
VGDGGLEVKKEEDEEQEEEEERRRELERQRAREREREAERERERERERERQRSEELKRKD
SDTLKMLRGELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEKKSKAEVEELRQRVR
ELEERERKESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDM
QEQNSRLMQQLREKDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLLVV
QKLEEKEGVLQSTLAALEKELALRTQALELNKRKAVEAAQLAEDLKVQLEHTQTKLREIQ
ASVLDNRTARERESVNLKKAQEDLSRLRRKLEKQKKVEVYTDADEILQEEINQYKAKLRC
PCCNTRDKETVLTKCFHVFCYECLKTRYDTRQRKCPKCNAAFGANDFHRIYIT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaagggaagcatgtctggcgcagggggtgggaagcgccccacaggaggggat
agtccccctggccctcctgaaaaaaagctgaagaaagaggagaaaacgaccaccactctc
atcgagcccattcgtattggaggagtttcttctacggaggaaatggacatgaaggtcatt
caatttaagaacaagaagctctgcgaacggcttgaacagaggcaggctttggaggatgag
ttgagagagaagattgagaagctggagaagaggcaggcaactgatgacaccaccctgctt
atcgtcaaccgctgctggactcagcttgaggaaaatatccatgaactgctgcaacgtgtg
gagcctaaggacaccccggaacctgtccagacccctgccacccctcctgttccagacgtc
ccagttcctgctgcagccccatcatctgctcctgaaccttctgctcctttgccagctcca
attgaaggtgaggttggcctcccacaagctccaccttcagctgaggcattggatgaagaa
cagcaacaactagtgcaagaaaaggaacagacgcaggagcaagagcaacaacagcaggtt
cctgactctgtggagaagtcagctgatgaaccagtgcaggacggaattcccgcccctcga
cctccaccatctctcagtgaaagtgcaaagactttcctggctactctggataacagcagt
gaggaggagctcaccctgcatttacaggacaggatgcagttcagcaagggcgccgtggcc
tgtatggtctgcatatttgaccgtctgcataccaccattgatgagctgtgtacccgagtg
cagtcagctgtttgtgaggatgacagtcagcgagagataatagctacaaaccgcacactt
ctagaggaacataatcgacttcaagatcttgcttactcccttcaagggaaacaccacaaa
atgtcattggagtataatgaactgattgacaaagttacaagttctgagactaaagtctct
gagatggaaacagctgtggaggatctgcagtgggacattgaaaaacttcgaaagagagag
cagaagctgaataaacacctagcagaagctctggagcagcttaattctggttaccatgcc
actggcagttcaggtggactacccggtggtcaaatcacactaagtatacagaagtttgag
tctctgaatgctgaactggagcagaaccaggaacttgccaacagccgtatggcggagctt
gagaaactgcagcaagagctacaggaagctgttcgggagagcgagaaactaaagatggat
ctgaggaatataccagaggaagtgttgaaggagacaccagagtacaagtgcctccaatca
cagttctctctactgtacaatgagtctctaagtgtgaaaacacagctggatgaggcaaga
gctctgctgcttacagccaaaaacgctcacctgcggcagatagagcacatggagagtgat
gagttgtctcttcagaaaaagttacgcactgaggtcattcagctagaggacacactggcc
caggtgcgcaaggagtacgaaatgctacggattgagttcgaacagaatcttgcagccaat
gaacaagcagggccaataaacagagaaatgagacacttaatcagcagtcttcaaaaccat
aatcatcagctaaaaggtgatgtgcagagatataaaaggaaactacgtgagagacagatg
gaaataaacaagttgaagtgccagagtggagaggcaggtgcactgatgttggaagaaagc
gtgggtgacggaggactggaggttaagaaagaggaagatgaggagcaggaggaggaggaa
gaaaggaggagagagctggaaaggcaacgggcacgggagagagagagggaggcagagaga
gagagggagcgagaaagagagcgggagagacagcgcagtgaggagctgaagaggaaggat
tctgacacactgaagatgcttagaggagagcttaaaaaagcacaggagtctcagaaggaa
atgaaactactgctagacatgtacaaatcagccccaaaggagcagcgagataaagtgcaa
cttatggccgcagaaaagaagtccaaagcagaagtggaagagttgaggcagcgagtacgg
gaactggaggagagggaaagaaaggaaagcaaaaagctggcagatgaagacgctctccgc
aagatccgtgtagctgaggagaccatcgaacacttgcagaaaaaactggctgctactaaa
caggaggaagaggctctgctgagtgagatggatgtgacgggacaggcttttgaagacatg
caggagcagaacagcagactcatgcagcagctcagagagaaagatgatgccaacttcaaa
ctaatgagtgagagaatcaaatccaaccagatttacaagcttctgcgggaggagaaagag
gaattggcagaccaagtgcttactttcaaaacccaggtggacgctcagctgctggtagtg
cagaaactagaagagaaggagggtgtcctgcagagcacactggccgctctggagaaagag
ctggcactgcgcactcaagccctggagctcaacaagcgcaaggcagtggaggcggcccag
ttggccgaggaccttaaagtgcagctggaacacactcagaccaagttgagggaaatccaa
gcctcagtactagacaaccgcactgcccgcgagagggagagtgtcaacctcaagaaagca
caggaggacttgtccagactgcggcgtaagctggagaaacagaagaaagttgaggtgtac
acagatgctgatgagattctgcaagaggaaattaatcagtacaaggctaaattacgttgt
ccctgttgtaatacccgagataaggagactgtcctcaccaagtgtttccacgtcttctgc
tatgaatgcttgaagactcgctacgacactcgccagaggaagtgccccaaatgcaatgct
gcattcggagcaaatgacttccaccgcatctacatcacctaa
DBGET
integrated database retrieval system
