Cyprinus carpio (common carp): 109069404
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Entry
109069404 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04382
Cornified envelope formation
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109069404
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109069404
09142 Cell motility
04820 Cytoskeleton in muscle cells
109069404
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109069404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109069404
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109069404
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109069404
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109069404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109069404
NCBI-ProteinID:
XP_042586836
Ensembl:
ENSCCRG00000037694
UniProt:
A0A9R0A7P8
LinkDB
All DBs
Position
B9:complement(8509230..8582748)
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AA seq
1694 aa
AA seq
DB search
MEGMNHLQHWNTLRCFLLCLAVLILTTEVNAGVKKSGGPCGGRDCSGGCQCFPEKGARGL
PGPLGPQGPTGPKGRPGDPGLQGPKGQKGDHGRGGIMGPKGSVGMEGFPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGESGTPGFQGFDGGPGISGQPGMKGEKGDPLDLWVYMERFR
GDPGPAGFPGFDGPTGNPGYRGMPGLQGPWGPTGIKGVKGQKGESSKKIKGMKGELGEIG
EPGPPGPYSQIRTIPSELQGKKGSKGNKGEQGDLGYLSTKGETGVSGFPGQRGNPGRNGL
PGPMGETGLPGFPGNFGRKGDRGEPGELIVPFNDTGVGPPGPPGERGPIGHHGPKGVKGL
PGPPGPPPTEQQQVDLWGPEGPNGPKGAKGEAGEPGNPATEPGPRGSDGNPGSPGPPGPK
GSLEEFFKGPPGISGRPGNAGKKGPKGDHGQCNCDVKSPPGPPGPSGDAGDFGMAGEWGQ
EGDQGEPGTRGVDGVPGFPGARGSPGPKGRKGEPIFATEKGQPGDPGDPGASGIPGVQGS
PGLDGRDGESGFQGPPGEGPVGEPGDKGYQGQDGPPGLRGQTGQPGQVLGATKGVRGLPG
DEGQVGTDGDQGLPGVPGDCSPEGEEQWSIPVECIGDPGPPGERGQPGLPGLDGFPGLQG
AKGSPGLFGEPGAKGEKGDPGREGPPGPRGKHWVACAFLYILLNHSYVYICLSPFLSSDN
LIXGYHGSKGVEGTPGLPGKLGLDGAPGEKGEHGEVLGASSGAAGDPGLPGQRGVIGLPG
DPGPQGHQGLEGMPGMIGLKGESGPSGLQGEIGTPGPPGTFGFPGQPGQVGPPGPPGKTG
EPGPSGESGDQGDPGLTGPRGVKGVTGEPGNFGLXGNIGPPGDPGQQGPYGINGLPGLKG
SKGGQGMTGFPGKPGEHGLKGFLGQKGTIGDPGQQGVKGPPGAPGLKGERGLAGPPGEKP
IIHIPPSMKEVMKGAKGDHGKMGDPGFTGPRGTKGLPGVPGTGGKDGHPGKPSYTKGTTG
FPGAKGSPGQKGMPGYKGKSGIEGFPGMAGPRGDKGKSGAYGQTGESGIKGIKGEFGPTI
SLPGSTGLRGETGLPGPFGEKGLIGNTGDRGSPGFDGIEGMKGYPGEPGEVGPPGSDGLQ
GFRGTQGQKGWPGVPGQAGTPGIQGHPGQKGFPGLKGIFGLDGLKGQKGIKGVAGSDSLG
PSGEPGAKGERGETGIPSTEPGVPGERGFKGFIGDPGNKGESGHPGVPGPQGEQGISDIK
GVQGDYGFPGPQGLPGFPGPRGIPGEPSPFGAKGQKGNSGDFGLTGKKGVQGDAGQKGPS
GEPGVSGRKGENGDPGMMGFPGSRGFEGNRGPVGPKGDTGPPGFPGSPGAKGLPPVPQKL
PGERGPPGPMGIQGPQGRSGNLGPAGPPGDPGILGPKGEKGMPGVPGIPGNPGFRGEHGQ
IGHPGLQGEEGTRGGPGLPGPIGMPGRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSL
LYFEGQEKAHNQDLGLAGSCLPRFNTMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMP
VEEAEIKPYISRCAVCEAPSVAIAIHSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGG
QSLVSPGSCLEDFRTTPFIECNGAKGTCHYFANKQSFWLTSIEQTFQSSPSSETLKAGQL
LARISRCQVCMKNL
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggagggtatgaaccatctacagcactggaacacattaaggtgttttctgttgtgcctt
gctgtccttatccttacaacagaggtcaacgcaggagtgaagaagagtggtggaccatgt
ggggggagagactgcagcggagggtgtcagtgttttcctgagaagggtgcgaggggattg
cctggaccccttggtccccaggggcccacaggccctaaaggtcgaccgggagaccctggt
ctccagggtccgaaaggacagaaaggagaccacggcagaggaggcattatgggtccaaaa
ggaagtgtgggaatggagggttttccagggtttaatggagcagatggtgttccgggtcat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaacggaacccgggga
gaatcaggaacaccaggctttcaaggattcgatggtggacctggaatatcaggccagcca
ggaatgaagggagagaagggtgaccctttggatctgtgggtctatatggaaagattcagg
ggagatccaggaccagcaggttttcccggatttgatggaccaactggtaacccagggtac
agaggaatgccaggattacaaggtccttggggtcctactggcattaaaggtgttaaagga
caaaagggtgaaagcagtaaaaaaataaaaggaatgaaaggagaattgggggagattgga
gagccaggcccaccaggaccttactcacaaatccgtacaatcccttcagaattgcagggt
aaaaaaggctcgaaaggtaataaaggtgaacaaggagatttggggtatttatctaccaaa
ggagagactggtgtgtcagggtttccaggacaacgggggaacccaggtcgaaatggcttg
ccaggacctatgggagagactggacttccaggtttcccaggaaattttggcagaaaagga
gacagaggagaacctggagagctgatagttcctttcaatgatactggagtgggtcctcca
ggacctccgggagagcgtggcccaattggacatcatggtcctaagggtgttaaaggactg
ccgggtcccccagggccccctcccactgaacaacaacaagtggatttgtggggaccagag
ggacctaatggaccaaagggagccaaaggtgaagctggggaacctggtaatcctgccact
gagcctgggccacgtggctctgatgggaatcctggatcccctggaccacctggacccaag
ggatcattggaagaattcttcaaaggcccaccaggaatatctggacgtccaggaaatgca
gggaaaaagggaccaaagggtgaccatggtcaatgcaattgcgatgtaaaatccccacct
ggtcctccgggtccttctggtgatgctggggactttggcatggcaggcgagtggggtcag
gagggtgatcaaggagagccgggaaccagaggtgtggatggtgtgcccggtttccctggt
gcaagaggatcacctggacccaaaggcagaaaaggagagccgatattcgctactgagaaa
ggacaacctggtgacccaggggacccaggtgctagtggcattccaggagtgcaaggaagt
cctgggcttgatggaagagatggtgaatcaggttttcaaggacctcccggagaaggtccc
gtaggtgaacctggagacaagggataccaaggtcaggatggtcctccaggtctaagaggt
caaacaggacaacctggccaagttcttggagcaacaaaaggtgtaaggggcctacctgga
gatgaaggacaagttggtactgatggagaccaagggttacctggtgttccaggagactgt
agcccagaaggagaagagcagtggagtattccagtggaatgtattggtgatcccgggcca
cctggagagagagggcagcctggtcttccagggttagatggatttcctggactgcaaggt
gctaaaggctcaccaggtctttttggagaacctggagccaaaggagagaaaggtgaccca
ggaagagaaggcccacctgggccacgaggtaagcattgggtggcttgtgcgtttctttac
attttattgaatcattcttatgtatacatctgtctgtctccttttctcagctctgataat
ttgatttaaggttatcatggctccaaaggtgtggaaggaactccaggccttcctgggaaa
ctaggtttggatggtgctccaggggaaaagggtgagcatggtgaagttttaggggcttct
tctggagccgctggagacccaggactgcctggacagaggggtgtcattggtcttccagga
gacccaggacctcaaggacaccaaggtttggagggaatgccgggtatgattggccttaag
ggtgaaagtggcccttcaggtcttcaaggagagataggaacacccggaccaccaggaaca
tttggctttcctgggcagcctggtcaagtaggacctcccggaccacctggaaaaaccgga
gaaccaggtccaagtggagaaagtggagatcagggagacccaggccttactgggcccaga
ggagtaaagggtgtcactggagaaccaggaaattttggtctannaggaaatattgggcca
cctggagatccaggacaacaggggccatatggtattaatggtcttccagggttaaaaggt
tccaaaggtggtcagggcatgacgggtttccctggaaagcctggtgagcatggtctgaag
ggctttttgggacagaaaggaacaataggtgatccaggacaacaaggtgtaaaaggacct
cctggcgctccaggtctaaaaggtgagagagggttggcggggcctccaggtgaaaagcca
atcatacatataccgccatctatgaaagaggtcatgaagggagctaaaggtgaccatgga
aaaatgggagatcctggcttcactggtcccagaggtacaaaaggtcttccaggtgttcca
ggaacggggggtaaagatggacatccgggtaaacccagttatacaaaaggtactacaggt
tttccgggagcaaaaggatctccagggcaaaagggaatgccagggtataaaggaaagtct
ggaattgaaggttttcctggaatggctggacccaggggtgacaaaggcaagtctggtgct
tatggacaaactggagaatctggaatcaaggggataaaaggtgaatttggtcctaccatc
agtcttccaggatcaacaggactgagaggtgaaactgggcttcctggaccttttggtgag
aagggactcataggtaacactggagacagaggaagtcctggttttgatggcattgaaggg
atgaaaggctatccaggagaacctggagaagttggaccaccaggttctgatggcctacaa
ggtttccgaggaacacagggtcagaagggctggcctggcgtgcctggacaggcaggaacc
cctggaatccaaggccacccaggacaaaaaggatttcctggtcttaaaggcatttttgga
ttggatggcctaaaaggtcaaaagggtatcaagggtgttgcaggttctgacagcttgggt
ccttctggtgagccaggagcaaaaggagagagaggagagaccggcatccccagcacagag
cctggtgtccccggagagcggggattcaagggtttcattggagatccaggtaataagggt
gaatctgggcatcctggtgtaccgggccctcagggcgaacaaggaatctctgatataaaa
ggagtccaaggcgactatggctttccaggcccacaaggacttccaggtttccctggtccc
agagggatcccaggtgaaccttctccatttggagcaaaaggacagaaaggaaattcaggt
gattttggattgactggaaaaaagggagtccagggggacgcgggacaaaaaggaccatca
ggggaacctggagtgtcaggaagaaaaggtgaaaatggagacccaggaatgatgggattc
ccaggaagccgtggttttgaaggcaataggggccctgttggacctaaaggagatactgga
cccccaggttttcctggctcacctggtgctaaaggacttccaccagttccacagaaacta
ccaggtgagagaggaccacctggcccaatgggtattcaaggaccacagggacgaagtgga
aacctaggccctgctggacctcctggtgatccagggattttgggtccaaagggtgaaaaa
ggcatgccaggtgtccctggaataccaggaaatccaggcttccgtggagaacatggacaa
ataggccaccctggtctacaaggggaagaagggacgcgagggggtcctggtttacctggt
cctatcggaatgcctggccgcagtgtcaatgttggctacctgctggtgaagcacagtcag
tctgagcagatccccatgtgccctgtgggcatgtccaagttatgggacggttacagtctt
ctgtactttgagggacaggagaaggcccacaaccaagatcttggtctagccgggtcatgt
ctcccccgatttaacaccatgcctttcctgtactgcaatcctggagacgtgtgctactat
gccagccgcaatgacaaatcctattggctgtccaccaccgcaccaattcccatgatgccc
gtggaggaggccgaaataaaaccatacatcagccgctgcgccgtgtgtgaagctccatct
gtggccatcgccatacacagtcaagatataacaatcccacagtgcccagcaggctggaga
agtctctggattggctactccttccttatgcacacggcagctggagatgaaggtggtggt
cagtctctggtgtctccaggctcttgtctggaagatttccgcaccactcccttcatcgag
tgtaacggggccaagggtacatgccactactttgccaacaagcagagtttctggttgaca
tctatcgagcagactttccagagttccccttcctctgagacactgaaagccggtcagctc
ttggcacgcatcagccgctgccaagtgtgtatgaagaacctgtga
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integrated database retrieval system
