Cyprinus carpio (common carp): 109069419
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Entry
109069419 CDS
T05134
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109069419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109069419
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109069419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109069419
NCBI-ProteinID:
XP_042599444
Ensembl:
ENSCCRG00000032865
UniProt:
A0A9Q9XCS2
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Position
B18:3792018..3806453
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AA seq
716 aa
AA seq
DB search
MSTETPPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAFEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFVAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYAAMMPEAVVTPSTPALKDEADRKPEYPKPDTSQMIPFQPRHLAPPG
LHPVPGGVFPVPTTAVILMKLLPPPSCFTGPFVQVDELIESLRRCVLPETVDAAVEMITG
KQFEMSSEGNGPVENHAVANKSLKRPNADSDEEEDKGSIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaaactcctccggaccaggcggcggagtacatcccagagaaggtgaagaaa
gcagagaagaagctggaagaaaacccgtatgacctcgacgcttggagcatactgattcgt
gaagcacagaatcaacccatagacaaagcgaggaagacatacgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctatacattgaagccgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggttctgcacattgacctg
tggaagtgttacctctcatatgtacgggaaaccaaagggaaactgcccagctataaggaa
aagatggcacaggcttatgattttgccttggataagattgggatggagattatgtcctat
cagatttgggtggattacatcaatttcctcaaaggagtagaggccgtggggtcatacgct
gagaaccagcgcatcacagccgtcagacgagtttatcagagaggctgcgtcaaccccatg
attaacattgagcagctctggagggactacagcaagtatgaagagggcataaacgtgcac
ttggccaaaaagatgattgaagaccggagcagagactacatgaacgccaggagagtggcc
aaggagtatgagacggtgatgaagggtttggaccggaacgccccctcggtgccgccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggagaag
agcaacccactgcgtacagaagatcagaccctcatcaccaagagagtgatgttcgccttt
gagcagtgccttctggtgctcggccatcacccggacatctggtacgaagctgcccagtac
ctggagcagtccagcaaactgctggcagaaaaaggggacatgaacaatgccaagctgttc
agtgatgaggccgctaacatctacgagcgtgccataggaactctgctcaagaagaacatg
ctgctctatttctcttttgcagattatgaagagagtcgcatgaagcatgagaaggttcac
agtatttacaaccgcctcctggccatagaagatattgaccctacattggtctatatccag
tacatgaaatttgccagaagagctgaaggcatcaagtctggccgcaccatctttaagaag
gccagagaggatcttcgcacacggcatcacgtgtacgtcaccgctgctcttatggagtac
tactgcagcaaggacaaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggtgacattcctgaatacattttggcgtacattgattacctctctcacttaaacgaggac
aacaacaccagagtcctgtttgagagagtcctgacgtccggcagtctttcccctgagaaa
tctggggaaatctgggcgcgcttcttggcctttgaaagcaacattggagacttggccagt
atcctgaaggtggagcgaaggcgtttcgtggccttcaaagacgagtatgaaggaaaggag
acggctctgctggtggacagatacaagttcatggatttatatccctgctccccctgcgag
ctcaaagccctcggctacaaggacgtgtctcgtgccaaatacgcagcaatgatgccagag
gcggtggtcactccttccacccctgcactgaaagacgaggccgaccgcaaacccgagtat
cccaaacctgacaccagccagatgatccccttccagccacgtcatctagcacctcccggc
ctgcatcctgttcctggaggagtgtttcctgtccctaccactgctgtcatcctcatgaag
ctgctgcctcctcccagctgttttacaggtccctttgtgcaggttgatgagctgatagag
tctctcagaagatgtgtgttaccagagacggttgatgctgctgtggagatgatcactggg
aagcagttcgagatgagcagcgaaggaaacggacctgtggagaaccacgctgtggcaaac
aagtccttgaaaagacctaacgctgattcagatgaggaggaagacaaaggatcgatcgca
cctcccatccacgacatctatcgagcgcgacagcagaagaggatccgatga
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