Cyprinus carpio (common carp): 109069549
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Entry
109069549 CDS
T05134
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03030
DNA replication
ccar03410
Base excision repair
ccar03420
Nucleotide excision repair
ccar03430
Mismatch repair
ccar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109069549
03410 Base excision repair
109069549
03420 Nucleotide excision repair
109069549
03430 Mismatch repair
109069549
03440 Homologous recombination
109069549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccar03032
]
109069549
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109069549
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109069549
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109069549
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109069549
MMR (mismatch excision repair)
DNA polymerase delta complex
109069549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
109069549
NCBI-ProteinID:
XP_018941725
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MGCFRMEFKRRNGGPTVGGASQAKKGKMNTEWEDSPSQFEEELALFDEMEMEAESGEGQA
GHDVIPVGDLFSADLNPRWKRPHAPPLQPNSDTLIFQQIDLDYYLGSAVAGMPGQVQGKV
PIVRMFGVTDSGNSVCCHVHGFAPYFYVPAPNGFTNAHLAEFQRELNSVVLKDMRSNKDN
IAVTVLAVDITKKESMYHYHGNKPLEFLRITMAMPRLIAPAKRLLEQGFKFANFATQSYQ
AYEANIDFEIRFMVDSDVVGCCWIELPKGKYRLREERSVGQTDSKYPGKVSLCQYEVDVA
WNHLVSHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEIDPVIQIASMVQRQGEKEPFI
RTVFTLQSCASIVGSQILCFTQEKQLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAA
TLKVSLFPYLGRVWGCKSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRS
YTLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVIN
YMEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEK
GFVHASFVQQRNCASRSRRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGK
LPCLEISQSVTGFGRQMIEQTKQLVESRYTISNGYQADAKVVYGDTDSVMVKLGVATVQE
AMNLGKEAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSNAEHHDKMDCKGIE
TVRRDNCPLVANLINTCLQNILIDRDPDGAVAHAKEVISDLLCNRIDISQLVITKELTRT
AQEYAGKQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEVSVVTPIYVL
ENNIPIDTQYYLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFA
QKRSTCIGCRAVLKTDEAVCDFCKKRESELYQKEITHLSTLEEKFSRLWTQCQRCQGSLH
EEVLCTSRDCPIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcttcagaatggagtttaaaaggcgcaatggaggccctacagtgggcggggct
tcacaggcaaagaaggggaaaatgaacacagaatgggaggatagtccctcccagtttgaa
gaggaactcgctctatttgatgaaatggaaatggaggcggagtcaggggaggggcaagca
ggtcatgatgtcattccagtgggtgacttattctctgctgatcttaatccacgttggaaa
cgacctcatgcacctcctctacaaccaaactcagacacactaatattccagcagatagac
ctggattactacttgggatctgctgtggcgggaatgcccgggcaggtacagggcaaagtg
cccatagtgcgcatgtttggtgtgacggacagtggaaatagcgtgtgctgccatgttcat
ggattcgcgccgtatttctatgttcctgctcccaacggttttacaaatgcacacttggct
gagtttcagagagagctgaactctgttgtattaaaggatatgcggtccaataaagacaat
atagcggtcactgtgctggcagtggacatcaccaagaaggaaagtatgtatcactaccat
ggaaacaaacctcttgaatttttgcgcatcaccatggcaatgccgcgtctgattgccccg
gcgaagcgtcttctggagcagggttttaaatttgccaacttcgccacccagagctaccag
gcctatgaagccaacattgactttgagatcaggttcatggtggacagtgatgtggtcggt
tgctgctggattgagcttcctaaaggaaagtacaggctgagggaggagaggagcgtagga
cagacagactcaaaatatccaggaaaggtgtcgctgtgtcagtatgaggtggatgtggca
tggaatcacttggtcagtcatccagctgaaggagagtggcagaggatcgctcctctcaga
gtcctgagctttgatattgagtgtgcaggaagaaaaggtgtgtttccggagccagagatt
gatccagtgattcagatcgcctctatggtgcagcgtcagggagagaaggagccatttatc
cggacggtcttcaccttacagagctgtgccagtatagtgggctcccagattctctgcttt
actcaagagaaacagctactgcagagttgggctgagtttgtaaggacagtggatcctgac
atcatcactggctacaatatccaaaactttgaccttccttacctcctcaacagagctgca
accttaaaggtgagtttgttcccgtatctgggccgtgtttggggctgtaaatcggtcttg
aaagactctagcttccagagcaaacagatgggccgcagagagaacaaaacagtcaatatg
gagggacgtgtgcagtttgacctactacaggtgttgctgagggattataaactgcgctct
tacacactaaacgccgtcagtttccattttctgcaggagcagaaggaggatgtgcagcat
tctatcatcacagacctacagaatgggaatgagcagacccgcaggcgtttggctgtgtac
tgtctgaaggatgcgtatctgcctctgcgcttgctgcagaagttaatgtgcgtcattaat
tacatggaaatggccagagttaccggggtgcccctgacctacctgctctctcgtggacag
cagattaaagtggtttcacagctcctgagacaggccatgaagcaggatctggtgatgcca
gtggtgaggacagagggtggagaggactacactggagccactgtcatagaaccagagaaa
gggtttgtacacgcttcctttgtacagcaacgcaactgcgcatcaaggtccagaagggcg
aaggcagagctgaagaaagagacagacccctttaaaaagcaggtgctggacggaaggcag
ttggctttgaagatcagtgcaaactcagtgtacgggttcaccggggctcaggtgggcaaa
ctgccctgtctggagatctctcagagcgtcactggctttggtaggcagatgattgaacag
accaaacagcttgtggaatcaagatacacgatctctaatggttaccaggcagatgcaaag
gtcgtctatggagacactgactctgtgatggtgaaactaggtgtggccacagtgcaggaa
gcaatgaatctgggaaaggaggccgccgaatgggtttcctcccacttcgttccaccaatc
aaattagagtttgagaaggtgtattacccatatctgctgatcaataagaagcggtacgcc
ggcttgtatttctcttctaatgctgaacatcatgataagatggactgcaaaggaattgag
accgtcagacgagacaactgccctctagtggccaaccttatcaacacatgcctccaaaac
atcctcattgacagagaccctgatggagcagtagctcatgctaaagaggtgatctctgac
cttctgtgcaaccgcattgacatcagtcagctggtcataactaaagagctcacacgcact
gcacaggagtatgctggcaaacaggcccacgttgagctagcagagaggatgcggaagcgc
gatgccggtagcgctccaaaccttggagatcgagtcccgtacgtcatcatcaaagcagca
aagggagtggcagcatatatgaaatcagaggtcagtgttgtgacccccatctatgtgctg
gagaacaacatccctatagacacacagtactacctggagcagcagctgtccaaaccttta
ctgcgcatctttgaacccatactgggcgagagcaaagctgagagtgtgttgctgaagggc
gatcacacacgctgtaagactgtcttgacatctagagttggtggtctcatggcttttgct
cagaaacgaagcacatgtattggctgccgagctgtgctcaaaacagatgaggctgtatgt
gacttctgcaaaaagagagagtcggagctttatcagaaagagatcactcatctgtcgact
ctggaggagaaattctctcgtctgtggactcagtgtcagcgctgtcaaggttcactgcat
gaagaagtgctgtgtaccagtcgagactgccccatcttttacatgaggaagaaagtgcag
aaagatttagacgaccaggagaagctcgtctcccgttttggttggtga
DBGET
integrated database retrieval system
