Cyprinus carpio (common carp): 109069636 Help Entry 109069636         CDS       T05134                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism ccar  Cyprinus carpio (common carp) Pathway ccar03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccar00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109069636 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ccar03041]     109069636 (cdc40) Spliceosome [BR:ccar03041]  Complex C   Other components    Step II factors     109069636 (cdc40) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 ANAPC4_WD40 DSE1_N Beta-prop_RIG_2nd WD40_RFWD3 ASA1 Beta-prop_TEP1_C Beta-prop_WDR75_1st PAC11 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_VPS8 WDR90_beta-prop_4th TRM82_WD Beta-prop_SCAP CFAP251_N Beta-prop_ACSF4 Beta-prop_NWD2_C UCP007778 WD_LRWD1 Beta-prop_Vps41 YJR039W_M Motif Other DBs NCBI-GeneID:  109069636 NCBI-ProteinID:  XP_042602456 UniProt:  A0A9Q9XJW4 LinkDB All DBs Position B20:24891192..24907554 Genome browser AA seq 578 aa AA seqDB search MAAAAASLVSYGSDSDSENESKSGTSPQKVDPDALAHLQPLKPGSVTSIAVLNSAPEVAV KEDVMTGVHLDPALKEVSYNPTFETMFAPEFGPANPFRSQQMAAPRNMLSGYAEPAHVND FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAVEEAEKNKGLMAFETGVKKSEKRKKV KGGDASDIDSFLGPWAKYQDEKDVAKPSEDEKKELDEIIAKRQKRGKNEEEAPAEEKTVL HIKDAYDYQGRSYLHVPQDVGINLRSADVPDKCYLPKKQLHVWTGHTKGVSAIRLFPVSG HLLLSCSMDCKIKLWEVYNERRCARTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS ETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt atggcggcggcggcggcttccctcgtttcttacggcagcgactccgattcggaaaacgag tctaaatccggtaccagtccgcagaaagtcgacccggacgcgctagctcatcttcagccg ttaaaacccggcagcgtaacgtctatagccgtgctgaattccgcgcccgaagtcgcagtg aaggaagatgtcatgaccggggttcatctcgatccagcactcaaagaagtctcttacaac cccacgtttgaaaccatgtttgctccagagtttggaccggcaaacccgttcagatctcag cagatggccgcgccgaggaacatgctgtccggttacgccgaaccggctcatgtcaacgac ttcatgttcgagcagcagaggagaaccttctctacatttggatacgctctggacccgtct gtggacaccagtcaggtctcgtccagcagctacattggagccgtggaggaagcagagaaa aacaaaggtctgatggcgtttgagacgggagtgaagaagtctgagaagaggaagaaggtg aaaggtggagacgcgtcagacatcgacagcttcctcggcccctgggccaaataccaggat gagaaagacgtggccaaaccctcagaggacgagaagaaagagctggacgagatcatagcc aagagacagaagagaggcaagaatgaagaagaggctccagcggaggagaagaccgtcctg cacatcaaagacgcgtacgattaccagggccgctcgtacctgcacgttcctcaggacgtg ggcatcaacctgcgctcagcggacgtcccggacaaatgctacctgcccaagaaacagctg cacgtgtggaccggacacaccaagggggtcagcgccatccgtctgttcccggtgtccggt catctcctgctctcctgctccatggactgtaagatcaagctgtgggaggtttataatgag aggagatgtgcacggacctttattggtcacagtaaagccgtgcgtgacgtttgcttcaac aacactggcacacagttcctgagcgccgcctacgacagatatctcaaactctgggactcc gagacgggtcagtgcatcgctcgcttcactaacaggaaggttccctactgcgtcaagttc aacccggacgaggacaaacagaacctgtttgttgctgggatgtcggacaagaagatcgtc cagtgggacatccgctccggtgaagttgttcaggagtacgacagacacctcggagccgtc aacaccatcaccttcgtggacgagaaccgccgcttcgtcagcacctccgacgacaagagc ctgcgcgtctgggagtgggatattcctgtggacttcaagtacatcgctgagcccagtatg cactcgatgcctgcggtcacgctctcgcccaacggtaagtggctggcctgtcagtccatg gacaatcagatcctgatcttcggagcgcagaacagattccggctcaacaagaagaagatc ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctccccggacatgagt tacgtggtgtccggcgatgctgacgggaagctgaatatctgggattggaagacgacgaag ctctatcaccggatcaaggcgcatgataaagtgtgcatcagcgcgctctggcaccctcac gagacgtcgaaggtgatcacctgcggctgggacggacagatcaagctctgggactga

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