Cyprinus carpio (common carp): 109069648
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Entry
109069648 CDS
T05134
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109069648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109069648
03036 Chromosome and associated proteins [BR:
ccar03036
]
109069648
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109069648
Coactivators
SAGA/TFTC/STAGA complex
109069648
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109069648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
109069648
NCBI-ProteinID:
XP_018941813
UniProt:
A0A9Q9V5V2
LinkDB
All DBs
Position
B11:17318436..17333232
Genome browser
AA seq
815 aa
AA seq
DB search
MVTTLTGTSTVQTLNGGNAMDPHTESGTPVSSGPSSSSDEASTSVPVVNNGPAVAKGVTV
APSPNTVIQSSYGNPPAAASSAGPSVTVVRPSMQTAGTGLTVNGSNNNNTVPATVANVAT
PGITITTNVSTTTTTPLLMNQTLASVSASKSEATKTIIQPAGTMTLGSGVAKGAVLQGVA
RTVAPVTVAAAVGSSTAIRAIAPQVLAPRLPQSTPGQNIHNIQLPPGMVLVRSDSGQLLM
IPQQMLAQMQAQSQAARPAAPTSTTPGQITSAQAPGTPLMARQVTPTTIIKQGSPTASST
ATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTISSATETMENVKKCRNFLSTLI
KLATSGKQSSETVANVKELVKNLLEGKIEAEEFTSRLYKELNSSPQPYLVPFLKRSLPAL
RQLTPDSTAFIQQSQGLQAPAVVLTSSNTAGTTATAHRTLIQPALSNSSQTASLVLQPPQ
QGAIVKPPQVTLTTTPMVTLRGQPHSHIVVGQPQVQLKQIQTVAVKQGVVSSTKLAPGSV
SVALAQKNKTKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCKDE
AFLSASMLQHKILEIGRRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKNMTYKE
DSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKE
MQQQELAQIQQRDANLTALAAIGPRKKRKLDSPSFGTDTEGSSLCASASGGLNAGASRQY
TRQRITRVNLRDLLFCLENEKSTSHSQLLYRALLK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgaccgggacgtccacggtgcaaactttgaacggaggcaatgcaatg
gatccgcacactgaaagcggcactccagtgtccagtggcccatcatcatcatcagacgag
gcttcaacttctgtcccagttgttaataacgggcccgcagtagcgaaaggtgtcactgtc
gccccaagcccaaacacagtgatacagtcttcttacgggaatcctccagcggcagcatcc
agtgcaggtccctcagtgacagttgtcaggccatctatgcaaactgctggaacaggttta
actgttaacgggagtaataacaataacaccgttccggcgactgtagccaatgtagcgacc
ccgggaattaccattactactaacgtttctactactacaacgacccctcttttgatgaac
cagactcttgcttctgtctcagcgagcaagtccgaggctactaaaactatcatccagccc
gccggcaccatgactctcggctctggagtggccaagggggctgttttgcagggggttgcg
agaactgtggctccggtaactgttgcagcagcagtgggatcgagtactgccatcagggcc
attgcgccacaggtgttagcaccccgactccctcagagcactccgggccagaacatccat
aacattcagctacctccaggtatggtgttggtgcgtagtgatagtggtcagttactgatg
atcccacagcagatgttggcacagatgcaggcccagtctcaggccgcccgtcctgctgcc
cccaccagcaccacccctgggcagatcacctctgcacaggcacctggaactcctctgatg
gcccgacaggtgactcctaccaccatcataaagcagggctctcctacagccagcagcacg
gccactaccacactccagagaccacctgtacagcaggcctcctctgtgggtgcagtgttg
tcagtgcaggcaggaaccgcccagaggactgtgactgctgccacagggaccaccatctcc
tcggcaacggagacaatggagaatgtaaagaaatgtaggaacttcttgtccacgctgata
aagctggccactagtggtaagcagtcatcagagactgtcgctaacgttaaagagctggtc
aagaacctgctggaagggaagattgaagcagaggagttcaccagcaggctctacaaagag
ctcaactcctctcctcagccttatttagtgcctttccttaagaggagtcttccagctctt
cgacagctcactcctgactccacagccttcatccagcagagccagggcctccaggcacct
gctgtggtgctgaccagctctaacacggctggtaccaccgccacagctcaccgcacgctc
atccagcctgccctcagcaactccagccagactgcctctctggtattgcagcctccacag
cagggggcaatagtgaagccccctcaggttaccctgacaaccactcccatggtgaccctc
aggggtcaaccccacagccacatagtggtgggtcagcctcaggtgcagctcaaacagatc
cagacagtcgctgtgaagcagggtgttgtgagtagcactaaactggctccgggctctgtg
tctgtagcgttagctcagaaaaataaaacaaaggatggtgctggaggaactttcagggat
gatgatgacattaatgacgtggcctcaatggcaggcgttaatctttcggaggagagcgca
cgtatcctggccaccaactcggagctggttggcgcagtcacgcgatcttgtaaggatgaa
gctttcctctccgccagcatgctacagcacaagatactagagataggccgaagatttgga
gtgacagagctgggtcccgaggttgtgaacatcgtctctcatgccactcagcagagactg
caaaaccttctagagaaggtctcattgatcgcccagcaaaagaacatgacttacaaggag
gatagtcggtatgagcaggtggaggatgttcgctctcagctgaagttctttgagcaactt
gaccagttggagaaacagaagaaagaggagcaggagagagaaattttaatgaaggcagct
aagtcacgctcgcgacaagaggaccctgagcagctgcggctgaaacagaaggccaaagag
atgcagcagcaggaactggctcagattcaacagagagatgccaacttgacggcgttggcg
gctatcggacccagaaagaaaagaaaactggattctccttcatttgggactgacacagag
ggctcaagtttgtgcgcgagtgcatccgggggcttaaatgcaggagcgtcgaggcagtac
actcgccagcgcatcacgcgtgtaaacctcagggatctgctcttctgtctagagaacgag
aaaagcaccagccactcgcaactgctctaccgagcccttctcaaatag
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