Cyprinus carpio (common carp): 109069829
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Entry
109069829 CDS
T05134
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109069829 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109069829 (smarcc2)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109069829 (smarcc2)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109069829 (smarcc2)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109069829 (smarcc2)
PBAF complex
109069829 (smarcc2)
GBAF(ncBAF) complex
109069829 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
PaaA2
Motif
Other DBs
NCBI-GeneID:
109069829
NCBI-ProteinID:
XP_042614476
Ensembl:
ENSCCRG00000032984
UniProt:
A0A9Q9Y6H9
LinkDB
All DBs
Position
A6:24358682..24373136
Genome browser
AA seq
1034 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPIKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVP
IPASLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSAPDERRDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQQMLSFPDKVKDKPADLQNFGLRTDVYSKKSGPAKTKNAASATREWTD
QETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQP
VPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEDAA
RASGRPDPLYGLEGSGIAGTGLEDSDKPSEDGSEENKSSDGQSSQDKRENKEIKDGASEE
EEKQGENGKKEEERAREGETDRETEKTDSEMADGEKEKEQKEGSEEGQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSNQPGNQSG
STPSVPHQPVTNASAPPPTQSPASVSATNAHNEAPPPASHSSPPTNAQTGAAHDSSTPLA
GDSLYPNAPVPPTQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccccaccaataaatctttgtcgagtctggtggttcagctccttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactagactaccgataaagtgt
tttttggatttcaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcatgactatagaaaagtctttggtacagaataactgcttgtcccgacct
gtgatttacctgagttcagagatagagcccaagctactgggaaaactgaaggatatcatc
aaacgacaccagggatctgtgactgaagataagctgtccagctctcatgtagtggtgcct
attcctgctagtctggaggacgaagagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctactggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattctggacctggatcagtttaatgagtggatgaatgaggaagactatgaggtggga
gaaggagggccgaggaggaagagaatttcagcaaagactctcacagatgaagtgagcgct
ccagatgaaaggagggataaaaaacccagcagtgccaaaaaaaggaagcgctccccgtct
ccatctcctacccctccaccacaggagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacaaagagaggaagaacaggaagatctgactaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgttgggaaggaggaagaagaaggttctccgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
catatcataatacctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagagcactgcctgagtttttcaatgggaaaaacaagtcaaagacacctgaaatttac
ctggcataccgtaacttcatgattgacacgtacagactgaacccacaggagtatttgacc
tctacagcatgccgtaggaacctggctggagatgtttgtgcaattatgagggtccatgca
tttctggaacaatggggcctgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcctcctctcagcagatgctctcattcccagac
aaagtcaaggacaaaccagccgacttgcagaactttgggttaaggacagatgtgtacagt
aagaagagcggtcctgctaaaactaaaaatgctgccagtgccactcgggaatggacagac
caggagacactgctactgctggagggtctagagatgtataaagatgattggaataaagta
tcggaacatgtgggcagccgcacacaggatgagtgcatcctccacttcctgcgtctacca
atcgaagacccctacctggaggatagctcctcctccctaggcccgctggcctatcagcca
gttccgttcagtcaggcgggaaatcctgtcatgagcactgtggcattcctggcctctgtg
gttgaccctcgagtggcttctgctgcggctaaatcagcacttgaggagttctctcgaatg
aaggaggaagtaccagctgcgctggtggaggctcatgtgcgtcgagtggaggacgcggcc
agagccagcgggaggccagaccctctctacggcctggagggcagtggcatagcaggaacc
ggccttgaggattctgacaaaccctctgaggatggaagtgaggagaataagagcagtgat
ggtcaatctagccaagataaaagagaaaataaggagatcaaagatggagccagtgaggag
gaagaaaaacaaggagagaacggcaagaaagaggaagagagagcgagagaaggggagaca
gacagagagacagagaaaacagactcagaaatggctgatggcgagaaggagaaagaacag
aaggagggatcagaagagggtcagagggatggagagagtgaaggggagaagaaagcaaag
gtggagagagatgtaggagagggaaacctggccactgctgctgcttcagcactcgctgct
gctgccgtgaaagctaagcacttggcagcagtagaggaaaggaagatcaagtctctggtg
gctctgctggtagagacccagatgaagaaactggagatcaaactccgacactttgaagag
ttggaaaccatcatggacagagagagagaagcactagagtatcagaggcagcagcttctt
gctgatcgtcagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacag
caacacttccagcagatccaacaccagcaccatagcaaccagcctggcaatcagtctggc
agtactccatctgtaccccaccagcctgtcactaacgcgtctgccccacccccaacacaa
agccccgcctccgtgagcgccactaatgcccacaatgaagctccaccacccgcctctcac
agttctcccccaaccaacgcacagactggagcagcgcatgattccagcactccactagca
ggggattctctctatccaaatgcccctgtgcctccaacacagtaa
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integrated database retrieval system