KEGG   Cyprinus carpio (common carp): 109069829
Entry
109069829         CDS       T05134                                 
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109069829 (smarcc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccar03021]
    109069829 (smarcc2)
   03036 Chromosome and associated proteins [BR:ccar03036]
    109069829 (smarcc2)
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109069829 (smarcc2)
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109069829 (smarcc2)
   PBAF complex
    109069829 (smarcc2)
   GBAF(ncBAF) complex
    109069829 (smarcc2)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_1 SWIRM SWIRM-assoc_3 Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 PaaA2
Other DBs
NCBI-GeneID: 109069829
NCBI-ProteinID: XP_042614476
Ensembl: ENSCCRG00000032984
UniProt: A0A9Q9Y6H9
LinkDB
Position
A6:24358682..24373136
AA seq 1034 aa
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPIKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVP
IPASLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSAPDERRDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQQMLSFPDKVKDKPADLQNFGLRTDVYSKKSGPAKTKNAASATREWTD
QETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQP
VPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEDAA
RASGRPDPLYGLEGSGIAGTGLEDSDKPSEDGSEENKSSDGQSSQDKRENKEIKDGASEE
EEKQGENGKKEEERAREGETDRETEKTDSEMADGEKEKEQKEGSEEGQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSNQPGNQSG
STPSVPHQPVTNASAPPPTQSPASVSATNAHNEAPPPASHSSPPTNAQTGAAHDSSTPLA
GDSLYPNAPVPPTQ
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccccaccaataaatctttgtcgagtctggtggttcagctccttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactagactaccgataaagtgt
tttttggatttcaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcatgactatagaaaagtctttggtacagaataactgcttgtcccgacct
gtgatttacctgagttcagagatagagcccaagctactgggaaaactgaaggatatcatc
aaacgacaccagggatctgtgactgaagataagctgtccagctctcatgtagtggtgcct
attcctgctagtctggaggacgaagagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctactggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattctggacctggatcagtttaatgagtggatgaatgaggaagactatgaggtggga
gaaggagggccgaggaggaagagaatttcagcaaagactctcacagatgaagtgagcgct
ccagatgaaaggagggataaaaaacccagcagtgccaaaaaaaggaagcgctccccgtct
ccatctcctacccctccaccacaggagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacaaagagaggaagaacaggaagatctgactaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgttgggaaggaggaagaagaaggttctccgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
catatcataatacctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagagcactgcctgagtttttcaatgggaaaaacaagtcaaagacacctgaaatttac
ctggcataccgtaacttcatgattgacacgtacagactgaacccacaggagtatttgacc
tctacagcatgccgtaggaacctggctggagatgtttgtgcaattatgagggtccatgca
tttctggaacaatggggcctgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcctcctctcagcagatgctctcattcccagac
aaagtcaaggacaaaccagccgacttgcagaactttgggttaaggacagatgtgtacagt
aagaagagcggtcctgctaaaactaaaaatgctgccagtgccactcgggaatggacagac
caggagacactgctactgctggagggtctagagatgtataaagatgattggaataaagta
tcggaacatgtgggcagccgcacacaggatgagtgcatcctccacttcctgcgtctacca
atcgaagacccctacctggaggatagctcctcctccctaggcccgctggcctatcagcca
gttccgttcagtcaggcgggaaatcctgtcatgagcactgtggcattcctggcctctgtg
gttgaccctcgagtggcttctgctgcggctaaatcagcacttgaggagttctctcgaatg
aaggaggaagtaccagctgcgctggtggaggctcatgtgcgtcgagtggaggacgcggcc
agagccagcgggaggccagaccctctctacggcctggagggcagtggcatagcaggaacc
ggccttgaggattctgacaaaccctctgaggatggaagtgaggagaataagagcagtgat
ggtcaatctagccaagataaaagagaaaataaggagatcaaagatggagccagtgaggag
gaagaaaaacaaggagagaacggcaagaaagaggaagagagagcgagagaaggggagaca
gacagagagacagagaaaacagactcagaaatggctgatggcgagaaggagaaagaacag
aaggagggatcagaagagggtcagagggatggagagagtgaaggggagaagaaagcaaag
gtggagagagatgtaggagagggaaacctggccactgctgctgcttcagcactcgctgct
gctgccgtgaaagctaagcacttggcagcagtagaggaaaggaagatcaagtctctggtg
gctctgctggtagagacccagatgaagaaactggagatcaaactccgacactttgaagag
ttggaaaccatcatggacagagagagagaagcactagagtatcagaggcagcagcttctt
gctgatcgtcagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacag
caacacttccagcagatccaacaccagcaccatagcaaccagcctggcaatcagtctggc
agtactccatctgtaccccaccagcctgtcactaacgcgtctgccccacccccaacacaa
agccccgcctccgtgagcgccactaatgcccacaatgaagctccaccacccgcctctcac
agttctcccccaaccaacgcacagactggagcagcgcatgattccagcactccactagca
ggggattctctctatccaaatgcccctgtgcctccaacacagtaa

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