Cyprinus carpio (common carp): 109069854
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Entry
109069854 CDS
T05134
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04514
Cell adhesion molecule (CAM) interaction
ccar04810
Regulation of actin cytoskeleton
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109069854
04514 Cell adhesion molecule (CAM) interaction
109069854
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109069854
09142 Cell motility
04820 Cytoskeleton in muscle cells
109069854
04810 Regulation of actin cytoskeleton
109069854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109069854
Cell adhesion molecules [BR:
ccar04515
]
Integrins
Integrin alpha subunits
109069854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
109069854
NCBI-ProteinID:
XP_042596216
UniProt:
A0A9Q9X7Z9
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All DBs
Position
B16:16520469..16577592
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AA seq
1025 aa
AA seq
DB search
MHPCFFRVCFRGCLLIFSILHEAAAFNLDLEKPTVYNGPEGSYFGYSLDFYHPTQDKNVI
SVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFK
SHQWFGASVRTHKDKVVACAPLYHWRTVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKTILRKVQG
EKQTVAASDAYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINATNLTFIQN
FTGEQMASYFGYTVAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDVLLF
SPPMTLTGKHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVFIYNGQKSGLML
QACQVLKGDWASSGVPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKIVAYRARPVVTVDA
QLILTPRILNPEDKSCRMPNSDDMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFTDSHQHQRTQQLVLGQGDRQHCHNYSVYLRDEGEFRDKLSPISVTLNYSLDQN
SPPPDLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDRTELLIGDDNLLM
LTIHAANEGEGAYEAELHVTLPPEADYIGVERRHEDLQRLNCEHRTENDTRVVVCDLGNP
MVADTNLSVGLRFSVQRLEDAPPTIGFELQIHSSNKDNSRSVPVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDEVGPQVQHIYELHNKGPSSISRTVLEVGWPSRFREE
HLLYVLQIITDGPVHCSVNGSLNPLKLETSTLQDTPELLGFLRNSSAPTRHRRSVSTAQS
YNSKILNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQV
MAMPYRIKADSLPHQSKSVSNLVCLWGCRLRKVENNKGKGKEKIFSYLEESGDYRKASGN
VKNKI
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcacccttgttttttccgcgtgtgttttcgtgggtgtttgctcatattttcaatttta
cacgaagctgcagctttcaacctggatttggaaaagccaacggtttacaatggaccagag
ggaagttattttggatactcactggacttttaccacccaacacaggataaaaacgtcata
tcggtgctagttggggctcctaaagcgaacacctctcagccagggattgtggagggagga
gcggtgtactactgcccctggccggcatcagacccagactcctgccgccagatccccttt
gataaagcaaataaccgaatgattaaagtgaacgggacacgggagcctctagaatttaaa
tcccatcagtggtttggagcctcagtcaggacccacaaagacaaagtggtggcttgtgcg
cccctctatcactggaggacagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtgcagaacttcagtgcctatgctgagtattctccatgtcgaaccaataac
ccggaccccgagggccagggcttctgccaggcgggcttcagcgttgattttactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggtgttgcagaaatattgaacggctattccctgaaaactattctgcgcaaagttcaggga
gagaagcagactgtggctgcatcagacgcatatgatgacagttacctaggttactctgta
gcggtcggagagttcacaggtgattcggaacaagaactggtagcaggggtgcctcgaggg
gctcacaactttggttatgtggctgtgatcaatgcaacaaacctgacttttattcagaat
tttactggggagcagatggcctcttattttggatacaccgttgcagtgactgatctaaat
ggagatgggctagatgacgtgctagttggagctccactctacatggaccgtgagtttgag
agtaaacctcgtgaggtgggccgtgtgtacttgtatttgcaagaggacgtgcttctcttc
tcccctccaatgacactcactggaaagcacctgttcggccggtatggaagtgccatcgcc
cctctcggagatatcaaccaggatggctaccttgacgtagcaataggagctccgttcgca
ggagaggatcgtggtggcagggtcttcatctataacgggcaaaaatctgggctgatgtta
caggcatgtcaagtgctgaaaggtgactgggcctcatccggcgtcccagcaggctttgga
ttcaccctgcgtggagattctgacctcgataacaaccagtaccctgatttgctggtcggt
gcatttggagtgagtaaaattgtggcctacagggcaaggccagtggtcacggtggatgct
cagctgattttgacacccagaattctcaaccctgaggacaagtcctgccgcatgcccaat
tctgatgatatggtaacctgtctgtcagtaaatgtgtgcgcaaagatctctgggattggt
attcctgattatgtagctctgagaatggacctgcagctggattggctgaagcagcgtgga
gcagttaagaggatcttgttcacggactctcaccagcaccagagaacccagcagttggtt
ctgggtcaaggggaccgccaacattgccacaactactctgtttacctgcgggatgaggga
gagttcagagataaactgagtcctatcagcgtgacactgaactacagtctggaccagaac
tctcctccacctgacctacagctgcggcccattttggaccactacagcaagaccttccac
catgagcaggcaaacatcctgttggactgtggagaagacaacatgtgcatcccagatctc
aaactgtctgctaaaatggaccggactgaacttttaatcggggatgacaacttgcttatg
ttgaccattcatgcagccaatgagggcgagggggcgtacgaggcagagcttcatgtgacc
ctcccaccagaggcggactatattggtgtggagcgcagacatgaggatcttcagcggctg
aactgtgagcacaggacagagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgacacaaacttgtcggttggtttacggttttctgtacagcggttggaagat
gcccctcctaccattggctttgagcttcagatacacagctctaataaggacaactcaaga
agcgttccggtgaatttgactctgagcattgcagcgagagcacaggtggagatcagaggt
gtgtctcacccagctcaggttgttttacctttccctcgatgggaacccaaagagaaacct
gtaagagaagatgaagttggccctcaggttcaacacatatatgagttacataataagggt
ccgagttcaataagcaggactgtgttggaggtgggctggccaagtcggttccgtgaggaa
cacctcctttatgtccttcagatcatcactgacggtccagttcactgcagtgtcaacggc
tccctaaacccgctgaagttagagacctccactcttcaggacactccagaattactgggc
tttctgaggaacagcagcgctccgactcgccatagacgatctgtttctacagcccagagt
tacaacagcaagatactgaactgctcaaatatcaactgcctgatggtggagtgtgttgtg
gatcgattagatcgagggcaaagcgcagtgatcaagttcagatctcgactctgggctcac
accttcttacagagacggaatgaccactacacgctaaactccacagtgtcctttcaagtg
atggccatgccttatcggatcaaagctgattcactcccacaccagagcaaatcagtgagt
aatctagtttgtttgtgggggtgcagattgagaaaagtggaaaacaacaaaggaaaagga
aaagagaagattttttcatatttagaagagagtggagattatagaaaagcatcaggaaat
gttaagaacaagatttga
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integrated database retrieval system