Cyprinus carpio (common carp): 109070175
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Entry
109070175 CDS
T05134
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X4
KO
K12200
programmed cell death 6-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03250
Viral life cycle - HIV-1
ccar03272
Virion - Hepatitis viruses
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109070175
03272 Virion - Hepatitis viruses
109070175
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109070175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109070175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109070175
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
109070175
Exosome [BR:
ccar04147
]
Exosomal proteins
Proteins found in most exosomes
109070175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
COG3_N
DUF2226
ORF6N
Motif
Other DBs
NCBI-GeneID:
109070175
NCBI-ProteinID:
XP_018942318
Ensembl:
ENSCCRG00000042173
UniProt:
A0A9Q9ZF42
LinkDB
All DBs
Position
B19:15416669..15430655
Genome browser
AA seq
865 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTSTYPPGEEQTEYLRAVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAIEPKFPFTELCLTFTWKDAFDKGSLFGGSVKLALASVGYEKTCV
LFNVGALASQIASEQNLDNDEGLKTAAKFYQLASGAFAHIKDTVLSALNREPTMDISPET
VGTLSQIMLSQAQEVFVLKATADKMKDAIVAKLANQAADYYGDAFKQCQYKENLPKEVLP
VLAAKHCMMQATAELHQSALANQKKKFGEEIARLQHATELVKTVASRYDEYVNMKDLSDK
ISRSLTAAKKDNDFIYHDRVPEVKDLEHIGKASLVKTTGIQTPLSQKFTDLFEKMVPMAV
QQSVSAANSRKSDTVNRLIGSMREATNLCNGVLASLNLPAALEDLSGDAVPQSILEKSRA
VVQQGGLQSIEQLIKDLPELLQRNREILDESLKMLDDEETTDNELRGKFNQRWNRTPSGD
LYKPLRAEGNNFRNILDKAVQADQVVKERYTAHCEMIALLCKPENELSAAIPSANPAKTL
QGSEVVNVLRAQLAQLDEVKREREVLEGEVKSVTFDMTAKFLTALAQDGAINEEALTTSE
LDSRYGSHTQRVQQNLRRQEELLSQIQVSHQEFSALKQSNSEANNREEVLKKLASAHDSY
IEISSNIKEGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIAREPSAPSFN
VPSYQSNTPAPASGGPNPAPRTVFTQQQPQAKPQPPARPPPPSVTPQAASTSAPVSTPVA
PSSANPPPVAPPSQAQGPPYPTYQGYPGYYQMPMAYNPYAYGQFNMQYMPYQAQGQAGYP
GAPPAQQPYPYPQQPPQQQPYYPQQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttctgtcccgttgaagaagtcctcagaggtcgacttagtgaaaccg
ttgtcgaaatttgtaacgtccacatatcctcccggtgaggagcagacggagtatctccgt
gccgtggaagagctcaataagctgcgcaaaagtgctcttggcaggccgctggacaaacac
gagagctcgctggagatcctgctgcgatattatgatcagctctgtgcaattgaacccaaa
tttccttttacagagttatgtctgacatttacatggaaagatgcttttgataaaggatct
ctttttggaggctcagtcaagcttgcattggcaagtgtgggctatgagaagacttgcgtg
ttgtttaatgtgggcgcgctggccagtcagattgcttctgagcaaaatctcgacaatgac
gagggactgaagaccgccgccaagttctaccagctggcgagtggtgcgtttgctcatata
aaggatacagtgctctctgcactgaatagagagcccaccatggacatctcccccgagacg
gtgggcacgctcagtcagatcatgctcagccaggcacaggaggtcttcgttctcaaagcc
actgctgataagatgaaggacgccattgtcgctaaacttgccaatcaggcggcagattac
tacggcgatgcttttaagcaatgtcaatacaaagagaatcttcctaaggaagtgcttccc
gtcctcgctgccaagcactgtatgatgcaggccaccgcagagctgcaccagtcagccttg
gctaatcagaagaaaaaatttggagaggagatcgctcggctgcagcacgccacagagctg
gtgaagaccgtggcttctcgatacgatgagtatgttaatatgaaggacctctccgataag
atcagtcgctccctcacagctgcaaagaaagacaatgacttcatttaccatgaccgtgtg
ccagaggtcaaagacctggagcacattggcaaagcatctttggtcaaaacaactggtatt
cagacaccactgagccagaagtttacagatctgtttgagaagatggtgccgatggcagtg
cagcagtcagtgagtgcagccaattccaggaagtctgacacagtcaacagactgattggc
agcatgagggaagcaacgaatctctgcaacggggtgttggcttctttgaacctgccggca
gcattagaagatctgtcaggagatgcagtccctcagtccatccttgaaaagagtcgtgct
gttgttcagcagggcggcctacagagcatcgaacagcttattaaagatctccctgaacta
ctgcagaggaaccgtgagatcctggatgagtccttgaagatgttagatgatgaggaaaca
acagacaatgaactccgaggcaaattcaatcagcgctggaacagaactccctctggagat
ctgtataaaccactcagagcagagggaaataatttccgcaatatactggacaaggcagtg
caggcagatcaggtggtgaaagagcgttacacagcacattgtgagatgattgctttgctc
tgcaagccagaaaatgagctcagtgccgccataccgtctgccaaccccgccaagactctg
cagggcagtgaggtggtaaacgtgctgagagctcagctggcacagctggatgaggtgaag
agggaacgggaagttctggagggagaggtgaagtcggtgacttttgatatgacagcaaag
ttccttaccgcactggctcaagatggtgccattaacgaagaggctctgaccaccagtgaa
ctggactctcgttacggctctcacacacaacgtgttcagcagaatttacgcagacaggag
gaactgttgtcacagatacaggtgtctcaccaggaattttcagcactcaagcagtccaac
tctgaggctaataacagagaggaggtcttgaagaagctcgcctcagcccacgatagctat
atagagatcagctccaatatcaaagagggcactaaattctacaatgatctgacagaaatc
ctgttaaagtttcaaaataagtgcagcgacattgtcttcgctcgcaaaactgaaagggat
gaacttctcaaggagctgcagcagagcattgctcgtgagccgagcgctccttcattcaac
gtcccatcataccagtccaacactcctgctcctgcctcaggaggcccaaaccctgcgccc
aggactgtgtttacccagcagcagcctcaggctaaaccccagccgccagcgagaccgcca
ccgcctagcgtcactcctcaggcggccagtacttcagctccagtcagtactccagtggct
cctagcagcgctaatcccccacctgttgcaccaccctcacaggctcaaggaccaccctac
cccacttatcaaggctacccagggtattaccagatgccgatggcctataacccctatgca
tacgggcagtttaatatgcagtacatgccctatcaagcccaggggcaagctggatacccc
ggagcccctcctgcacagcagccctacccctatcctcaacaacctccacagcaacagccc
tactaccctcaacagtag
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