Cyprinus carpio (common carp): 109070255
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Entry
109070255 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109070255
04121 Ubiquitin system [BR:
ccar04121
]
109070255
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
Other 90S particles
109070255
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109070255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IFT140_1st
KNTC1_N
eIF2A
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109070255
NCBI-ProteinID:
XP_042629044
Ensembl:
ENSCCRG00000046600
UniProt:
A0A9Q9YZ30
LinkDB
All DBs
Position
A16:complement(18609607..18616627)
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AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA
SLDGHRDGISCITKHAKSLSXIISGACDGEVKVWNLPRQECLRTVQAHEGFVRGICSRFC
GTSFFTVGDDKTIKQWNWEAPGYGVREEPINTILGKAVFTGIDHHQREGTFVTCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETELLASCASDRSVVLYDTRESAPLRKVIMQLR
SNTLCWNPMEAYYFTCANEDYNLYTYDIRHLDVPVTVHMDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDKGHSREVYHTKRMQHVICVRWSADNKYVLSGSDEMNIRLWKANASEKL
GLLSAREKAATHYNKKLIEKFQHHPQVRRIARHRHLPGDILKQKRELREMREARRRKEQN
VRKHSKPGSVPLLTEKEKHVVAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttgtagaaacccggacgattatgttcgagagacgactagagat
atacaacgagtgcccaggaactatgacccgaccctgcatccttttgaggtgcccagggaa
tacaccagggccctaaatgccaccaaactggagagggtgtttgccaaacctttcgtagct
tcactagatggtcacagagatggcatcagctgcatcaccaaacacgccaaaagcctttcc
nnaatcatatctggtgcctgcgatggggaggtgaaagtgtggaaccttcctaggcaggag
tgtttgaggacagttcaggctcatgaaggatttgtacgaggaatctgttcccgcttttgt
ggcacttcctttttcacggtcggagatgacaagaccatcaaacagtggaactgggaggca
ccaggatatggagttcgggaggaaccaattaacacgattctggggaaggcggtgttcact
ggcattgaccaccaccagagggagggcacgtttgtaacctgcgggcagactgtggatatc
tgggatgagcagagaagcagtcccatccgctccttcagctggggtgtggacagcttcagc
tgcgtccgctacaaccctgtggagaccgaacttctcgctagctgcgcatcagacagaagt
gtcgtcttgtatgacaccagagaatctgcaccgcttagaaaggttattatgcaattgaga
agcaatactctttgctggaacccaatggaagcatattattttacctgcgccaacgaagac
tacaacctttatacttacgatataaggcatctggatgttcctgtgactgtgcacatggat
catgtatccgctgtgctggatgttgattattccccaacaggaagggaatttgtatctgcc
agctttgacaaaaccatccgaatctttccgaaagacaaaggccacagcagggaggtgtac
cacaccaaacggatgcagcatgtcatctgtgtgagatggtccgctgacaacaaatatgtc
ctgagcggctctgacgagatgaacattcggctttggaaggccaacgcctcggagaagctt
ggactgctctccgcccgagaaaaagctgccacacactacaacaagaagctgatagagaaa
tttcagcaccatccacaggtgagacgcatcgcccgtcaccgccacctgcctggagacatc
ctgaagcagaagagagagctgcgggaaatgagggaagcccggcgcaggaaggaacaaaat
gtccgcaaacacagcaagccgggatctgttcccctgctgacagaaaaggagaaacatgtg
gtggctgttgtggagtaa
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