Cyprinus carpio (common carp): 109070446
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Entry
109070446 CDS
T05134
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109070446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109070446
03041 Spliceosome [BR:
ccar03041
]
109070446
03036 Chromosome and associated proteins [BR:
ccar03036
]
109070446
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109070446
Spliceosome [BR:
ccar03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109070446
Complex B
109070446
Complex C
U2 SnRNP specific factors
109070446
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109070446
TFTC complex
109070446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
109070446
NCBI-ProteinID:
XP_042630660
Ensembl:
ENSCCRG00000026756
UniProt:
A0A9Q9Z260
LinkDB
All DBs
Position
A18:981083..1006982
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKLQEIVVSRGKILELLRPDANSGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAFMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDAGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPHRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRVISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAICRFSSGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADETYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGSKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgaccctgcagcgggcaactggcatctcccatgccatccatggc
aacttctcaggaactaagctgcaggagattgttgtttcccgtgggaaaattctggaactg
ctgcgtcctgatgccaacagtggtaaggtccacacgctgcttactatggaggtgtttggt
gttatccgatccctcatggctttcaggttgacaggtggaactaaagactatgttgtggtt
ggaagtgactctggccgtattgtgatcttggagtaccatccttccaagaacatgtttgaa
aagatacaccaggagacgttcggcaagagtggctgcagacgtattgtgccagggcagttc
ctcgctgtggacccaaagggcagagcttttatgataggtgccatagagaagcagaagttg
gtatacatcctgaatagagatgcagctgctcgccttaccatctcctcccctctagaggcc
cacaaggctaatacactcgtctaccatgtggttggtgtggatgcgggctttgagaacccc
atgtttgcctgcctggagatggactatgaggaggcagataacgatcccactggagaggct
gcggcaaacacacagcagacgctgaccttctatgagttggacctgggcctcaaccacgtg
gtgcgcaagtacagcgaggcactggaggaacacggcaacttcctcatcacagttcctggt
ggttcggatggtcccagtggtgtgctcatttgttctgagaactatatcacctacaaaaac
tttggggaccagccggacatccgttgcccgatcccacacagaaggaatgacctagatgat
cctgagcgaggcatgatatttgtctgctctgccacccacaagaccaaatcaatgtttttc
tttctagcccagacagaacagggagacatttttaaggttactctggaaactgatgaggag
atggtaaccgagatcaggatgaagtattttgatacaatcccagtggctacagccatgtgt
gttttgaagactggcttcttatttgtttcttcagagtttggaaaccactacctgtatcag
attgcccacttgggtgatgatgacgacgaacccgagttttcctctgccatgcctctggag
gagggagacacattctttttccaaccccgaccccttaagaaccttgtgctggtcgacgag
caagaaaatctttctcccatcatgtcctgccagattgctgatttggctaatgaagacacc
ccacagctgtatgtggcatgtggcagaggacccagatctacattgagagttttgagacac
ggactggaggtttcagaaatggctgtttctgaactgcccggtaacccaaatgccgtgtgg
actgtcaggagacatgtagaagatgagtttgatgcctacatcattgtgtctttcgttaac
gccaccctggtgctttctatcggagagactgtggaagaagtgacagactctggtttcttg
ggaacaacacccaccctgtcctgctcgttgctgggagaagatgcacttgtacaagtctac
ccagatgggattcgtcacatccgtgcagataagagagtgaatgaatggaagactccaggg
aagaagacaattgtccgatgtgctgtcaatcagaggcaggtggtcattgctttgactgga
ggagaacttgtctactttgagatggacccgtccgggcagctgaatgaatacactgagagg
aaggagatgtctgcggatgtggtgtgcatgagtttggcaaatgtgccccctggtgaacaa
cgttcccgtttcctggctgttgggttggtggacaacactgtccgcgtcatctccctggat
ccatccgactgtctgcagccattgagtatgcaggctcttcctgcccagccagagtctctt
tgtattgtggagatgggcggagtggaaaaacaggatgagcttggagaaaaaggcaccatt
ggcttcctgtacctcaacataggcctgcagaatggagtgttactgcgtactgttttggat
ccagtgactggagacctgtctgatactcgaactcggtatctcggctctcgtcccgtcaag
cttttcagagtccggatgcaggcccaagaagctgttctggccatgtctagtcgttcctgg
ctgagttactcataccagtcccgtttccacctgactccattgtcatatgaaaccttagag
tatgcatcagggttcgcttctgaacagtgtcctgagggtattgttgccatctccactaac
acactgaggattttggctcttgagaaactgggtgccatcttcaaccaggtggctttccca
ctgcagtacacacctcgcaaatttgtcatccacccagagacaaataacctgatcctaatc
gaaacagaccacaacgcctatactgaagccaccaaagcccagcgcaagcaacaaatggct
gaggaaatggtggaggcagcgggagaggatgaaagagagctggctgcagaaatggcagca
gctttcttgaacgagaacctgccagaagccatctttggggcacctaaagcaggctctggg
caatgggcctcactagtacgcatgattaaccccattcagggcaacacactggacctggtg
cagctggagcagaacgaggctgctttcagtgtggctatatgtcgattttccagtggaggc
gatgattggtatgtgttggtgggagttgccagagatatgatactcaatccgcgctccgtt
ggtggaggttatatttatacctatcggctagtaggaggtggagacaagctggagtttttg
cacaagacacccgtggaggacgtgcccctagctattgctccctttcagggacgagtattg
gttggagtgggcaaactcttgcgcatctatgacttaggaaagaagaaacttctccgcaag
tgtgaaaataagcatgttcctaacttggtaacaggcatccacactatcgggcagcgtgtg
atagtgtccgatgttcaggaaagtctattctgggtgcgctacaggcgcaacgagaaccag
cttattatctttgccgatgaaacatatcctcgttgggtcacgaccgcctgcctgcttgat
tatgacaccatggctgctgcggataagtttggaaatatctgcgttgtccgtctgcctccc
aacaccagtgatgatgttgatgaggaccccacaggaagcaaagcattgtgggacagaggt
ttgcttaacggagcatcacaaaaggccgaggtgattattaattatcacattggagagaca
gtgctgtccctccagaaaactaccctcatccctggaggatcagagtccctggtgtacacc
acgctatcaggaggcattggcatcctggtgccgttcacttctcatgaggatcatgacttc
ttccagcacttggagatgcatatgcgctctgagtttccccctctatgtggtcgtgatcac
ctcagcttccgctcatactattttccagtgaagaatgtgatcgatggagacctttgtgag
cagtttaactcaatggacccccataagcagaagagtgtgtctgaggaattggaccgcaca
cctccagaggtgtctaagaaactggaagacatccggacacgctatgccttctag
DBGET
integrated database retrieval system
