Cyprinus carpio (common carp): 109070682
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Entry
109070682 CDS
T05134
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109070682
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Other domain-containing proteins
Tubby family proteins
109070682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML_2
UvrD_C
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
PAT1
DUF3527
Motif
Other DBs
NCBI-GeneID:
109070682
NCBI-ProteinID:
XP_042577453
Ensembl:
ENSCCRG00000008749
UniProt:
A0A9Q9W5Z2
LinkDB
All DBs
Position
B4:complement(1115491..1145623)
Genome browser
AA seq
1718 aa
AA seq
DB search
MFAAVELGPVLCSDSNILCLSWKGRVPRSEKERPVCRRRCYEEGWLATGNARGVVGVTFT
SSHGRRDRPAPQRTNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGMQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGISSMSWNYPSFLMEDSSESDTDSDDHTPL
QVHRVKPLLTVCFTSGDVSLMSNYDDLSPTLIRTSLKDVVVQWCSQGDLLAVAGMERLVM
TSDPSQATRNAIVKFYNVCGEHIYSLETPAQRPISALCWGHRDSRLFLASGPVLYVLRVE
HRVASLQLLCRQVIASAVHEEKDVAKLSMPSRLSTCVSSAFAPTIKPPIPDPNNMRDFVS
YPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPKT
DGKTDEVYGNSFIPSVIDSCNCSDSSDIELNDEWVGKKSPKISRGSKSPKLPRDLVCPFT
NRINIDPRKSPKLSRTAQEISRSPRLPIRKPSIGSPSLTRREFLLDDITQHNYLAQVTSN
IWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYVNLPMFSPNV
FSEDEDDLPVTGASGITDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVKLD
VLSNPTSTVAPPGVSDQGQQDTVLTTQYTVPARYSSPGQVIFGGVEVGRILVAQSQQEQQ
QQQQQQLQQHYQQHQQLQQQLQQYQLQHQQLLQHQHMQQQQQQHMQQQIQQMQQQQQMQQ
QLQHQIQQQHLQMQLQHQQMQQQLQQQHQIQIPVPTLPSGQPSCPVIQLTQSAIPDVPPA
AEHGAEHELLLKIKTTRSAPQLAEGDAVVFTAPLEISKMNPPPPYPGTVAAAMAAASVAV
SVAASTSSTSGATGSSSSTSSSGEACVKKGDLTLYPPGAQAAQYPTPLGYERITTFDSSG
NVEEVCRPRMRLVCNQNVYPLQGPGSSATLRVSSSSSAVEGKKVQLPYATLNRLTVPRYS
IPSGEPPPYPDTANQGGVGRNPGQRLDSSLIHATLRRNSREAALKVSQILDPQRTLPSKA
KASTLSASYQPRGPTALYTCSQCSNNDGAASSGSNGIAGGTIIRQDFPPNRGGAPHSTVI
VHSNSASHLPSQSSYSLLSMDGTGGVSSAGGNRERADYINSAFTEDEALNQSLRQMSLNT
EVVSLTVKRPPPYQWDPSATEEIWVPQERTATLPTSGPTASHKPPPLILSPAQHLDVSRL
PFVLSPKSPTSPNAATFQLAGTYQIALPYPPSSAYSGSMQASPRPTSPKEVVTPLSFSQQ
DQAVVLPPGYSPNLACCPLPPMYPGTASCSNLPVTIPLLPWGSYNPCPPMPSPPGPAPSL
PPKTAHLLDKPVLSPPPQPPPLPTPPPDLQSPPESIAEAGENFQEVLSLNESPVPQRADR
FGKKNRKHLDNSRAEEANVPAITEGGNKFKKEGRALGDFNSLISSPRLGSRDKKKPKGQK
EQLKAKKLSKATTNEFQDSSESEPELFISGDELMNQSQSGKKSWKTKRNLRVGGCELDEI
KCRKANEKEDRGLGSQGFVYIMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQ
VMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcggtggagctcgggcccgtcctgtgcagcgactccaacatcctgtgcctg
tcctggaagggccgcgtgccccgcagcgagaaggagaggcccgtgtgcaggaggcgctgc
tatgaggagggctggctggccacagggaacgcccggggcgtcgtgggggtcaccttcacc
tccagccacggcaggagagaccggcccgccccgcagcgcaccaacttcaacctccgggga
cacaacagcgaggtggtgctggtgcgatggaacgaacccttccagaagctggccacctgc
gacaccgacggcgggatcttcgtctggatccagtatgagggccgctggtcagtggagctg
gtcaacgaccggggagctcaggtgagcgacttcacctggtcccacgacggcatgcaggcg
ctgatctcgtaccgcgacggcttcgtgctggtgggctcggtgagcggtcagcgccactgg
tcctcggagatcaacctggagagtcagatcacctgtgggatctggacccccgatgaccag
caggtgttgtttggcacggcggacgggcaggtgatcgtcatggactgtcacggacggatg
ctggctcacatcctgctgcacgaggcagagggcatcagcagcatgtcctggaactacccc
agcttcctgatggaggacagcagcgagagcgacaccgactcggacgatcacacgcccctg
caggtgcaccgtgtgaagccgctgctgaccgtctgcttcacgtctggagacgtcagtttg
atgagcaactacgatgacctctcgcccacgttgatacgcaccagcctcaaagatgtggtg
gtgcagtggtgctctcagggcgacctgctggctgttgctgggatggagagactcgtgatg
acctctgacccctcccaagccacccgaaacgccattgttaagttttacaatgtttgcggt
gaacacatttactcactggagacacctgctcagaggccgatcagcgcgctgtgctggggt
catcgggactcgcgtctgttcctcgccagcggcccggtgctgtacgtgctccgcgtcgag
catcgggtcgccagcctgcagctgctgtgtcgtcaggtcatcgccagcgcggtacacgag
gagaaggacgtggccaagctcagcatgccctctcgtctcagcacatgcgtgtcttctgcc
ttcgcccccaccattaagccccccatcccggatcccaacaacatgcgggacttcgttagt
tatccgacatcaggtaacgagcgtctgcactgcaccatgaagcgcaccgaggacaaccct
gaggtcggcggcccttgctacaccctgtacctggagtatctgggggggcttgtccctatt
ctgaaaggtcgtaggattagcaaacttcgccctgaatttgtcatcatggacccaaagact
gatgggaaaacagatgaagtctatggaaacagcttcatcccctccgtgattgacagctgc
aattgctcagactctagtgacattgagctcaatgatgagtgggttggaaagaaatcgcca
aagatctccagagggagcaagtctcccaaacttcccagagacttagtgtgtccctttacc
aacaggataaatatagatccccgtaagtcccccaagctctcccgcaccgcacaggaaata
tcacgatcgcctcggctccccattcgcaagccctccattggctctccgagtctgactcgg
cgggagtttctgcttgatgacatcacacagcacaattatcttgcgcaagttacatctaac
atatggggaacaaagttcaaaattgtggggcttgcagcatttttgccaacaaatcttgga
gcagttatctacaagacaagtctgcttcacctccagcccagacagatgaccatctacctc
cctgaggtgaggaagatctcagtggaatacgttaacttacccatgtttagtcctaatgtc
ttcagtgaggacgaggatgacctgcctgtcacaggagcatcaggaatcactgatgataat
ccaccttgcactgtcaacatacccatcgcccccatacacagccccgcgcaagccatgtcc
ccgacccaaagcatcggccttgtccaatccctattagccaatcaaaatgtcaagttggat
gtgttgtccaatccaacatcgactgtggcaccacctggggtttctgaccaaggacagcag
gacactgtgctcactacacagtacactgttcctgccaggtattctagtcctggacaggtc
atctttggaggtgtggaggttggtcggattttagttgcgcaatcccaacaagagcagcag
cagcagcaacaacaacagctgcaacaacattatcaacagcatcagcagctacagcaacag
cttcaacaatatcagctgcagcatcaacagttgttgcagcatcagcacatgcagcagcag
cagcagcaacacatgcaacagcagatccagcagatgcagcagcaacagcaaatgcagcag
cagcttcagcatcaaatccaacagcagcatctgcaaatgcagctgcagcaccagcaaatg
cagcagcagttgcaacagcagcatcagatccaaatccctgttccgactttgccctcaggt
caaccgtcatgcccggtcattcagcttacgcagagtgccatcccggacgttcccccagca
gcagagcacggagcggagcatgagcttctgcttaaaattaagacgactcgttctgcccca
caactggctgaaggtgatgcagtagtttttactgcccctcttgagattagcaagatgaat
cctccccctccttaccctggtacagttgccgcagcaatggcagctgcctcagtggcagtt
tcggttgctgcttctacgagttccacctccggggcaacgggaagcagctctagcacttca
tcctcaggggaagcttgtgtaaagaaaggggatctaaccttgtatccacctggtgcacag
gcagctcagtacccaaccccactgggctacgaacgcatcaccacatttgacagcagcgga
aatgtggaggaggtgtgccgtccccgtatgcgactcgtttgcaaccagaatgtttacccg
ctgcagggcccaggaagctctgccaccctcagggtctcatcatcttcctctgctgtagag
gggaagaaggtgcagttgccctacgccacgttgaaccgtctcactgtgccaaggtactct
atacccagtggggaaccacccccttaccctgatacagccaatcagggcggagtggggcgg
aaccctggccagagattggacagcagcttgattcacgctaccttgaggcggaacagtcgt
gaagctgcgctgaaggtttctcagatcctggatccccaaagaaccctgccctctaaggcc
aaagccagtactttgtctgcttcctaccaaccgagagggccgacggctctttatacatgc
agtcagtgcagtaataacgatggggctgccagcagtgggagtaacggaatagctgggggg
acaattattaggcaagatttcccaccgaacagaggtggtgcacctcacagcactgttata
gtgcactccaacagtgcctcgcatctgccttcccaatcttcctacagcctactcagtatg
gacggaaccggtggagtgtctagtgcaggtggaaacagggaaagggctgactatatcaac
tctgcctttacagaggacgaggctttaaatcagtctctgagacaaatgtctcttaatacg
gaggtagtgagtttgacagtcaaacggccaccaccgtatcaatgggacccgtctgctact
gaagagatctgggttccacaagagcgaacggcaactctgcccacgtctggacctactgcg
tcccacaaacctcccccactcatcctcagccctgcacagcatctggacgtctcccgtctt
ccatttgtcctctcgcctaaatctccaacgagtcctaatgctgcaactttccaactggcg
ggcacataccagattgctctgccctatccaccaagttctgcctacagtggttccatgcaa
gcttctccacgtcccacctctcccaaagaggtggttactcctctttccttttcacagcag
gaccaagcagtggtcttgccacccggttattctcccaatcttgcttgctgccctctccca
ccaatgtaccctgggacagcttcttgttcgaatctgcctgtgaccattccacttcttcct
tggggttcttataatccctgtccacccatgccaagccccccaggtcctgctccgtccctt
ccaccaaagaccgcgcacttgctggataagcctgttctttctcctccccctcaaccaccc
cctctgcctacacctcctccagacctccagagtcccccagaatccatcgccgaggctggg
gagaactttcaagaggtgctctcgcttaacgaaagcccagttcctcaaagagcagatagg
tttggcaagaagaaccgcaagcatttggacaacagtcgggcggaggaagccaatgttccg
gcgatcacagaaggaggcaacaagttcaaaaaagagggccgtgccctcggtgacttcaac
tccctcatctccagtccgaggttaggcagtcgagacaaaaagaaaccaaaaggccagaaa
gagcagctgaaagccaaaaagctaagcaaggccaccacaaacgagttccaggacagctcc
gagagcgagccggagctcttcatcagtggcgacgaactgatgaaccagagccagagcggt
aaaaagagctggaaaacgaaaaggaacttgcgggtgggaggttgcgagctggacgaaatt
aaatgccgaaaggctaacgagaaagaagaccgcggtctcggcagccaagggttcgtctac
atcatggccaacaaacagcctctttggaacgaagccacgcaggtctaccagctggacttt
ggaggaagagtcacacaggaatcggcaaagaacttccagattgagctcgaggggagacag
gtgatgcagttcggaaggatcgatgggaacgcatacatcctggactttcagtaccccttc
tcagccgtgcaagcttttgctgtagcactggctaatgtcacccagcgcctcaagtga
DBGET
integrated database retrieval system
