Cyprinus carpio (common carp): 109070791
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Entry
109070791 CDS
T05134
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109070791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109070791
03021 Transcription machinery [BR:
ccar03021
]
109070791
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109070791
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109070791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
109070791
NCBI-ProteinID:
XP_042628002
Ensembl:
ENSCCRG00000029642
UniProt:
A0A9Q9YX38
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All DBs
Position
A16:3516114..3551485
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AA seq
706 aa
AA seq
DB search
MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSDIRMLKPIEVENPAADSPMESTDSERN
GSDSNNQVQPMKINPFSLSPTLSSGTKTKVEDCGEMSPAAVQTTHAQTALPHTQLMLTGG
QLAGLTALLPAQQQLLLQQAQLLAAAVQQSHAAHVANQQQAQQQASQHAAQPQSQGQSQS
TQEQTAAPVPPPPHQLPLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSPAQFLLPQTQQG
QQGLLSTPNLIPLPQQNQGSLLAAPPRLSLQAQREKVAESIVNTVTSHPEEPSDLEELEQ
FARAFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWL
TDAVEANILQNIFLYIPQKKESHTETMSMDSTLPSPSALSSPSLGFDGLPGRRRKKRTSI
ETNIRIALERSFITNQKPTSEEILLIAEKLNMEKEVIRVWFCNRRQKEKRINPSSATPPL
PSQPQPTSHKPPCYSPHMISSHGPSQTVSSLSTAVTTMSSVCPLTPSGPSLSSAPSPVTP
PPRSDASPAPPTHSTLNLNTSSWHKKNGDVSNYINDFAASLRNTVRGVKTGMNQALLGSN
PLATIQALAASGGQLPISSLESSSKVLIGGSGGQGAGLPSSLFLNHSSLLPMATGTGMGL
GGSALAKTSFPVTGGMSPSPCSSPISSCSSGELLHSPHSIGGAKIE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctttgccggtgccgtttgtcttgccgagaactgcctctgatctccacgcc
tggcgcctcaagtccccgctggctctgcgctctcactccgatatcagaatgttaaagcca
atagaggttgagaatccagcggcagactctccgatggagagcactgactctgaaagaaat
ggctcagattcaaataatcaggttcagccaatgaaaatcaaccctttctctctttctccc
acactgagcagcggcaccaagactaaggtggaggattgtggtgagatgtctcccgctgct
gtacaaactacacatgctcagacggcccttccccacacacagctgatgctaacaggtggt
cagctcgcagggttgactgcacttttgccagcacagcaacagctgctcttacagcaggcg
cagctcctcgctgcagctgtgcagcagtcgcatgcggcccacgtggccaatcaacagcaa
gcccagcagcaggccagtcagcacgcagctcagccgcagtcgcagggccaatcgcagagc
acacaggaacaaaccgccgcccctgtcccgcctcctcctcaccagcttcctctttctcag
ccaatccagctcactgcgcaggacattcagcagttgctgcagctgcagcagctagtcctc
gttccaggacacactctgccttcacccgcacagtttcttttaccacaaacacagcaaggg
cagcaagggctgctatcaacgccaaatctaattccactacctcagcaaaaccaaggaagc
ctgctggccgctccacccagacttagtcttcaagcacagagagagaaggttgcagagagc
atcgtgaacacagtgacctctcatcctgaggagcccagtgatctggaggaactggagcaa
tttgcccgcgcattcaaacagaggaggatcaaactgggcttcacacagggtgatgtggga
ttggccatgggaaagctctatgggaatgatttcagtcagaccacgatctctcgctttgag
gcgcttaatctcagcttcaagaacatgtgcaaactcaaacctctgttggagaagtggctg
actgacgcagtggaagccaacattcttcaaaatatcttcctttatattccacagaagaaa
gaaagtcatacagaaacaatgtcaatggacagcaccttgccaagtcccagtgctctttcc
tctccttccctggggtttgatggcctgcctggccgccgtaggaagaaacgcaccagcatt
gagaccaacattcgtatcgctctggaacgcagcttcatcacgaaccagaagcctacctca
gaggagatcctactcatcgctgagaagctcaacatggagaaggaggtgatccgtgtctgg
ttctgcaaccgccgacagaaagagaaacgtattaacccctccagtgccacccctcccttg
cccagccaaccccagcccacctcgcacaaacccccctgctacagcccgcacatgatttcc
agtcatggaccatcgcagacagtgagcagtctcagtacagcagtgaccaccatgtcatca
gtttgccctttgaccccaagcggtccctccctaagctctgcaccatctcctgtaacccca
cctccccgcagtgatgccagccccgcccctccaactcacagtacactaaatctgaacaca
agttcatggcataaaaagaatggtgacgtttctaactacatcaatgactttgctgcaagt
ttgaggaatacggtgaggggagttaaaacaggaatgaaccaagctcttcttggcagcaac
ccacttgctactatccaagccctagcagccagtggtggccagctgcccatttccagtctt
gagagcagcagcaaggtgttaattggtggttctggaggccaaggagcaggtcttccctct
tccctctttctcaaccactcctctttgttgccaatggcaacaggcaccggcatgggattg
ggcggttcagctcttgccaaaacctcatttcctgtcacaggcggcatgagtccctcccct
tgctcgagccccatctcttcctgctcttccggcgaattgctacacagcccacactcgatt
ggaggggctaaaatcgagtga
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integrated database retrieval system
