Cyprinus carpio (common carp): 109070803
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Entry
109070803 CDS
T05134
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109070803
04621 NOD-like receptor signaling pathway
109070803
04622 RIG-I-like receptor signaling pathway
109070803
04623 Cytosolic DNA-sensing pathway
109070803
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109070803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109070803
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109070803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
T2SS_PulS_OutS
Motif
Other DBs
NCBI-GeneID:
109070803
NCBI-ProteinID:
XP_018942860
Ensembl:
ENSCCRG00000029695
UniProt:
A0A9Q9ZF47
LinkDB
All DBs
Position
B25:19678071..19684080
Genome browser
AA seq
425 aa
AA seq
DB search
MAATQGSANVKPQFGPWLIEQVESGTYEGLCLIGNDIFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKINEYPDNKAKWKTNFRCALHSLKNFEMLEDHSKDPYDQHKVYRIIRPQNHQEI
QSVEPDQLPFIPHLYSASNYMTDEMEQELLNQVETMDLNHQHTESQPWETGSQQIIPTTS
SNYYESPYSDVQSFQNNTPVPGPPLYTTGQQCNLPAFCDLEISINYRRTEVLKTRLCSPL
VQFHYQCEPSELRGEPICFPSTEGLIDQRQIQLTERILDKIQRGVQLEVNQQGIYGFRQD
QCKVFVSTSNPSEIQNPEPRKLNQNTRELLLSFEKYTRDLKDFIENRRGSPDYTIYLCFG
EKLPDGRPLERKLITVKVVPLICRIFHERAQMEGASSLPNESISLQISHNSLFDLIHSLG
LPSVA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacgcagggaagtgcaaatgtcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggacatatgagggattgtgcctgataggcaatgacatattccggatc
ccctggaaacacaactcgcgaagagaccttggggatgacgatgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaatgagtaccctgacaacaaagcgaaatggaagaca
aatttccgttgtgcacttcatagtctaaaaaacttcgagatgttagaggatcactccaaa
gatccgtacgaccaacacaaagtctatcgcatcatccgtcctcaaaatcaccaagagatc
cagagtgtagagccagatcaacttccattcattcctcatctctacagtgcatctaattac
atgactgatgaaatggagcaggaattgctcaaccaggtggagacaatggatctaaatcat
caacacacagaatcccaaccatgggaaaccggttcccaacaaatcattccgaccacctcg
agcaactactacgagtctccctactccgatgttcaatcctttcagaataacacacctgtc
ccaggaccgccgctctacactacagggcagcaatgcaaccttccagccttctgtgacctg
gagatctcgatcaactacagaagaacagaagttttgaaaactcgcctgtgttcgccactc
gttcagtttcactaccagtgcgagccatctgagctgagaggagagccaatctgcttccca
tccactgagggtctgatcgatcaaagacagatccagttaaccgaacgcatcctggacaaa
attcaaagaggcgtgcagctggaggtaaaccaacaaggcatctacggcttccgtcaggac
cagtgtaaagtcttcgtcagcaccagcaacccgtctgagatccagaacccagagcctaga
aaactgaatcagaacaccagagagcttctactcagctttgagaagtacacaagagatcta
aaggattttatagagaacagacggggttctccggattacaccatctacctgtgcttcgga
gagaagcttccagatggaagaccactggaaaggaaactgattactgtcaaagttgtacct
ctgatctgccgtatatttcatgagagagctcaaatggagggagcgtcctctcttcccaac
gaaagcattagcttgcagatctcccacaacagcctttttgaccttatacattctttgggt
ttgccttcagtggcctaa
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