Cyprinus carpio (common carp): 109071004
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Entry
109071004 CDS
T05134
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109071004 (rnf38)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109071004 (rnf38)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109071004 (rnf38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109071004
NCBI-ProteinID:
XP_042627934
UniProt:
A0A9Q9YWZ3
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All DBs
Position
A1:163251..191669
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AA seq
673 aa
AA seq
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MPIATTGHSASREPRVCSPDPVPKRADLCEDVGAQPAEYGGSEGGHSLGSTRLSGALESS
SAASHSPPTSSFLHHHHLHHHHHPPHPVTMEPPRTRSRSRSGFYHGGLSNPNGNAGSGGG
ALSPAGGISHHHHHQQQLGAAHGHTENLRPPGNTLSPGSHRHPGPGMHRNSGAGAMGGVY
HYHSDHACADATDKTEDSPSPKRQRLSQQSVLEFTSAPPSTPSPPIRPWELPPSRRPHPY
PHPHYHPERCHTPARHRRSPPVRRQRGRRERLSRHHPPHGSPGGGQDENYRHPPHPHSLH
PYGQPPSHPPPGLDEPRAFHPPTLSPRLLHPPQQGAMVMDLHEQLPQGTVPVSYTVSPVP
PHGLPAPLCTGQHLPACSSQQQVPACSVVFSGQQHYPICSVPPPMLPACSVQHLPVPYAA
FPSLLSSDPPFLLHPPHLSHHPPHLPTPGQFLPFQTQQSRSPLQRIENEVELLGDHLSVG
GGFNYPHSGHPSPLPPSTPLQFLSHEPLPQELFGMPYPHFMPRRITGRRYRSQQAVPPPP
YHPSLLPYFLSVLPVQPTAVGPTISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKAD
IEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPI
CRADASEVQRDSE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgccactactggtcattcagcatctcgagagccccgcgtctgttccccggac
cccgtccccaagcgtgctgatttatgcgaggacgtaggggcccagccagcggaatacggg
ggttcagaggggggccacagcctgggcagcactagactctctggagcacttgagagctcc
tctgcggcgtctcattcccctcccacttcctctttcctccaccaccaccacctccaccac
catcatcatcccccccatccagtgactatggagccccccaggactcgatcacgctcgcgg
tctggattttaccacggtggattatctaacccgaatggtaatgctgggagtggcggcggt
gcgctaagtccagctggaggaataagccaccaccaccaccaccaacagcagctcggagct
gctcatggacacacagaaaacctgcgcccacccgggaacacgctttccccaggctcccac
agacatccagggcctggaatgcacagaaactcaggagcaggtgcaatgggaggagtatac
cactatcattcagatcatgcctgtgcagacgccactgacaagacggaggattctcctagt
ccaaagagacagcgcctttcccagcagtctgtactggagtttacctctgcccctccttcc
actccctcgccgccaatcagaccatgggagcttccgcccagtcgcaggccacacccctat
ccccacccacactaccatcccgagcgctgccacacacctgcacggcacagacgcagtcct
ccagtgcggcgtcagcgagggcggcgagagcgtctgtcacggcaccaccctcctcatggt
tccccaggtgggggacaggatgaaaactatcgccatcctcctcacccacattcgcttcat
ccctatggtcagccaccgtcccaccctccacccggccttgatgagccccgggcctttcac
ccccccacgctctcgccccggttattgcaccctccacagcagggcgccatggtgatggac
ctccatgagcagctccctcagggtacggtgccggtgtcatatacagtttctccagtgccg
ccccatggtctacctgcccccctctgtacaggacagcatctcccagcatgctcttcccaa
cagcaggtgcctgcctgttctgtggtcttcagcggacagcagcactatccaatctgtagc
gtaccgcctcctatgttgcctgcatgttcggtgcagcatttgccagtgccgtacgccgcg
tttccttctcttctctctagtgatccacccttcctgcttcatcctccacatctgtcacat
catccgccccacctgcccactcctggacagttcttacctttccagacacaacagtctcga
tctccgctgcagaggatagagaatgaggtggagttgttgggggatcacctgtcggtaggt
ggagggtttaactaccctcactcggggcatcctagtcctctgcccccttccactcctctg
cagttcctctcccatgaacccctgccacaggagctctttggaatgccctatccacacttc
atgcctcgacgaatcacaggcaggcgctaccgctctcagcaggccgtacctcctcctcct
taccacccaagtctgctgccctacttcctatctgttcttccagtccagccaacagcagtg
ggtcccaccattagcttagagctggatgtcgatgatggagaggttgagaattatgaggct
ctgttaaaccttgccgagcgtctcggagaagcgaagcctagaggtttgacaaaggccgat
attgaacagctgccttcctacagattcaaccccagcaaccatcagtctgagcagactttg
tgtgtagtgtgcatgtgtgattttgagtctcgtcagctgttgagagtactgccctgtaat
catgaattccatgccaagtgtgtcgataaatggcttaaggctaacagaacctgtcctatt
tgccgagcagatgcatctgaagtccagcgggattccgagtga
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