Cyprinus carpio (common carp): 109071044
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Entry
109071044 CDS
T05134
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109071044 (cfap43)
Cilium and associated proteins [BR:
ccar03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
109071044 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML
WD40
WDR55
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
CFAP43_N
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
DUF7099
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109071044
NCBI-ProteinID:
XP_042592851
UniProt:
A0A8C1NMA8
LinkDB
All DBs
Position
B13:16735362..16748955
Genome browser
AA seq
1657 aa
AA seq
DB search
MDVLGNLEVRWVQGFNNGTFRFVDKKTTCYTCGNFIVFLDMETKSRKTLQSPGSGIGAFT
ASGHRRCLAFSDLKLNPSIFVYNYPELEQICKLKGTTKLGYTALALCDTGPYLVCASSMP
DHTISLWNWESGILLCSHPLLGEDVTALVFNPMNWCQIAAVNLSSLTIWNVEKCDNYHLM
KPSAIDLPSADGSVIECEANLSCTLSRKLTHLGPQMPISAIAGLSGDRADDFVPLKQIKP
KLCPSALCWSTSSDLYVGSKEGFLLCVNPDTLLVSVLYKPQTELNPTDESKTALQEGSFQ
SLVLQDCNIFAAGMEGILRNIQIKGNKLEVVQTWALDEAASSICFSPDGETLLIVSNTGC
VYRLKPLLNDNIVKVLDVLCGDFVAVAPLYTDRSICLSVREAGDVQLWALDDGLCMGSIS
LQIHVTSMACCPIAQYVVVGTATGDVLFVEMTTKQKPRLVHRVHLYRVPVDHLVFDQGGN
FLITGASDSRMFVLNARPSKGFEIIGWIEAPGAIVNLSTQYHTESKQVKVLVLCSKTERE
INEGNVLLLLTLFVQQLTDSSGCVDVYGCLCKDVLHSCLYEIPHALCSCVLAINKIFGYC
QQRKVLQSFRIPESRVKPSNAQEAVHLILEKEAGGHLLSPAFLQLSPHQTWLATVGRDGL
LRISEISTMDRYVQLQCHSCWQGGVGSVCFTPDSQTLITSGLRDGSLVCSSLRLKLSGAG
KANAATQYAQSVADSFESVVSSENTILSKMTDWDPQTQSMASCSSFLTGEGKMSHEGEQE
ENYFVSPASSTWLDGKLDAVLQEETQQYAETKKNLRKNIKVLRDTIKAMIQENESLPDME
KLGHQEFNLDVEEQQRMQLEGKQEVNRVRKEIEMENLAKCYQREILKKECWDSMQVKGKA
IKAFHSENEVKNYPMKERTEKELEELQRTETMRQIEQESSQLQEVILNTISGDKEEEEAE
DSKTESPALTGSLSALYGGVNPHLYSQFNLHIREQKINQITLLKDVIYKVKSTFNKEFEA
VYKQKEQEINRLREKNKRISEIMTELDLSESLWEPSLTDNECPERVLTVTDSEIKVEKYL
TPEQKEKEEQLKQEDERQGLAAKSDNTRDQALSVMMGGVLELKKEDVLRMEVPQPEFMSK
PEVQWTEEERKSFKEFEKKAKELSEEKEKYRKTLETEMKKLLTSIKEATQMFDEKLTKLF
ERKVKSEMVIYQEELKIANLVHSIQTEEEILSREKQLSLKLEKARIVKNEIGEELKKHKE
TVDAFREEYDNTVTEDKLLDKGFRKEFFDVPGHIIDQLYKLYKRRPRVQRIKTQTENNQF
KEGALLGTAPSDGLSLMIKAMEELDAPENMPEGLDPFVWERFCLARRAKVESEQKVKLKA
LTLAEMQAFLQRRTDEDEKAQLEIKNLIDELNSICEEKMRFRLDSMVQIVLQQGQVEVEA
GDFIADYTNALLIHRKVIEDLNSTIRALGDQKIASMVECKDFRKGIIQQEWDHRRMRMHL
EDLSNKARDIQTLRITQEIQDYLNEISNDNRVSKQLTTLETTLDLQKTTHQKKVEACKKQ
IKHLDRQGVQMQEKNAALDLKVADMEITVAERRNIYEAVAMGDNQETEAEKNYQDIILRK
KLLNIAGAQSEEILILRAELEKLRMKNFPSLSQLDYN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgggaaacttggaagttcggtgggtgcaaggattcaacaatggcacattt
agatttgttgacaagaaaacgacatgctacacctgtggcaactttattgttttcctcgat
atggaaactaagtcgaggaagactctgcagagtcctggttctggtatcggggcctttaca
gccagtgggcatcgccggtgtcttgccttctctgacctcaaactcaatccttccatcttt
gtctacaactatccagagcttgagcagatatgtaaactgaaaggtacaactaaactgggc
tatacagctttggcactgtgtgacactggcccttatttagtctgtgcttcctccatgcct
gatcacaccatctcattatggaactgggagagcggcattctcctttgtagccatccactc
ttgggagaggacgtcacagcattggtttttaaccccatgaactggtgtcaaattgctgct
gtaaatctgagctcccttactatctggaatgttgaaaagtgtgacaactatcatttgatg
aagcctagtgctattgatctcccctccgccgatggttcagttattgagtgtgaagcaaac
ctgtcttgtacgctcagtagaaagttgacacacttaggtcctcagatgcccatttcagca
atcgctgggctgagtggagacagagctgacgattttgtgcctttgaaacaaataaaacca
aaactgtgtccaagtgccctctgctggtctacttcttctgacctatatgttggttccaag
gaaggttttctgctttgtgtgaatcctgacactttgcttgtctctgtcctgtataaacct
caaactgaattaaatcccacagatgaaagtaaaacggccctgcaggaaggcagcttccag
agcttagtactacaagactgtaatatttttgctgcaggaatggaaggcattttacgaaac
atacaaattaaaggaaacaaattggaggtagtgcagacttgggctttggatgaggcagcc
tcgtctatatgcttttcccctgatggtgagacactgctgatagtttctaatacaggctgt
gtttacagattgaaaccactgctgaatgataacattgtcaaagttctggatgtactctgt
ggagattttgtggctgttgctccattatacactgacagaagcatttgtttgtcagtcaga
gaagcaggagacgtacagctgtgggccctggatgatggactctgcatgggctccatctct
ctgcaaatacatgtaaccagtatggcatgctgcccgatagcacagtatgttgttgtagga
acagccactggagacgttctgtttgtggaaatgaccacaaaacaaaaacccagactagtt
cacagagttcatctctaccgtgtccctgtagaccatttggtgtttgatcaaggtggcaac
ttcttaatcacaggagcatcagactcacgcatgtttgtgctgaacgcaaggccatcaaaa
ggatttgaaattattggatggattgaggctccgggtgcaattgtaaacctttccactcag
taccacacggaaagtaaacaggttaaagtgctggtgctatgcagcaagacagagagagaa
atcaatgagggaaatgtgcttctgctactgactttgtttgtgcaacagcttacagactcg
tcaggttgtgtggatgtctatggctgtctgtgtaaagatgtcctgcacagctgcctatat
gagatccctcacgctctctgctcttgtgtcttggccataaacaagatatttggttactgt
caacagagaaaagtcttgcaaagtttccgtatccctgagagtagagtaaagccatcaaat
gcacaggaagcagttcacctgatcctagagaaggaggcagggggccatttactgagtcct
gcttttctacagctctccccacatcaaacctggctggcaacagttggcagggatggactg
ctgcgcattagtgagatctcaacaatggacaggtatgtgcagctgcagtgccactcatgt
tggcagggtggagtcggatctgtttgtttcaccccagacagtcagaccctcatcacctcg
ggcctgagggatggctcacttgtctgcagcagtctcaggttaaagctttctggggccggc
aaagcaaatgcagctacccagtatgctcagtcagttgctgattcttttgagtcagtagta
tcctcagagaacaccatcctctccaaaatgactgactgggatccacagacacaatccatg
gccagttgttcgtcatttctaacaggagaaggaaagatgagtcatgaaggtgaacaagag
gaaaactattttgtgtccccagctagttctacatggcttgatggaaaactagatgcggtt
cttcaagaagagacccagcagtatgcagagaccaaaaagaacctaagaaaaaacatcaaa
gttcttcgtgacacaatcaaagcaatgatacaagagaatgagagcctgccagacatggag
aaacttgggcaccaggaatttaacctggatgtggaagagcaacagaggatgcagctcgag
ggaaaacaggaagttaacagggtgaggaaagagattgagatggagaatctggctaagtgc
tatcagagagagatcctgaagaaagaatgctgggattccatgcaagtcaaaggcaaagcc
attaaggcctttcattcagaaaatgaggtgaagaactaccccatgaaggaacgcactgaa
aaagaactcgaagagcttcaaaggactgagaccatgaggcagattgaacaggaaagttca
caacttcaagaggtgattttaaacacaatctctggagacaaagaggaagaagaggcagag
gacagtaagaccgagagtcctgctctgacgggcagtctgagtgctctgtacggaggtgtc
aatcctcatctgtacagccagtttaacttacacatcagagagcagaaaatcaaccaaatc
accttgctaaaggatgttatctacaaagtgaagagcacattcaacaaagaatttgaggca
gtttacaagcagaaggaacaggaaatcaaccgtcttagagagaagaacaagcgtatttct
gagattatgaccgagctggacctcagtgagagcctgtgggagcctagtctcacggataat
gagtgtcctgagagagttcttactgtgaccgattcagagatcaaggttgagaaatacctc
acccctgagcaaaaagaaaaagaagaacagctaaaacaggaagatgaacggcaagggctt
gcagccaagtctgacaacacgagagatcaagcactaagtgttatgatgggtggagttctg
gagcttaaaaaagaggatgtgctgaggatggaagtacctcagcctgagttcatgtctaaa
cctgaggtacagtggacagaagaagagagaaagagcttcaaagagtttgagaaaaaagca
aaggagctcagtgaggagaaagagaaatacagaaaaacgctagagacagaaatgaagaaa
ctgctgacttctattaaagaggctacccagatgtttgatgaaaaactcacaaagctgttt
gaaaggaaagtgaaatcagagatggtcatataccaagaggagctcaaaattgcaaatctg
gttcactccattcaaactgaagaagagatcctaagcagagagaaacagctgagtcttaaa
cttgaaaaggcacgaattgtaaagaatgaaattggggaagaattgaaaaaacacaaggag
actgttgatgcgtttagagaggagtatgataacacagtcactgaggacaaacttcttgat
aaaggatttcgcaaagagttttttgacgttcctggacacataattgaccagctctataag
ctttacaaacgcagaccaagggttcagaggataaaaacacagactgaaaataaccagttt
aaagagggagcactattaggaacagcaccatctgatggactgtctctgatgataaaggcc
atggaagaattggacgcaccagagaacatgccggaaggattagatccgtttgtgtgggag
aggttttgcctggctagacgggccaaagtagaaagtgaacaaaaggtcaaactaaaagca
ttgaccctggcggagatgcaggcttttcttcagaggagaacagatgaggacgagaaagct
cagcttgaaataaaaaatcttattgatgaactcaatagcatctgtgaagaaaagatgagg
tttcgactagacagtatggtgcagatcgttctacagcaaggtcaggtggaagtggaggct
ggagacttcattgctgattatactaacgctctgctaatacatcgcaaagtaattgaggac
ctcaacagcaccatcagggctttgggagatcagaagatcgccagcatggtggagtgcaaa
gacttccgcaaaggaatcatacagcaggagtgggatcacaggagaatgagaatgcatctg
gaggatctcagcaataaagccagagacatacagaccctgcgcatcactcaggagattcaa
gattacctaaatgaaataagtaatgacaacagggtgtcaaagcagctcacaactctggag
acgacccttgatttacagaaaacgactcatcaaaaaaaagttgaggcttgcaagaagcag
ataaagcacctggacagacaaggtgtgcaaatgcaagaaaagaacgcagccctcgacttg
aaagtggctgacatggagataactgttgcagagagaagaaatatttacgaggctgttgca
atgggagataaccaggagacagaggcagagaagaactaccaagacatcatcttgagaaag
aagctgttgaacatagctggagcacaatctgaagagatactcatactgcgagcggagctt
gagaaactgcgtatgaagaacttcccatctctttctcaactagactacaactga
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integrated database retrieval system
