Cyprinus carpio (common carp): 109071062
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Entry
109071062 CDS
T05134
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109071062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109071062
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
109071062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
109071062
NCBI-ProteinID:
XP_042602897
Ensembl:
ENSCCRG00000049244
UniProt:
A0A8C2LAY8
LinkDB
All DBs
Position
A1:14225381..14281977
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AA seq
512 aa
AA seq
DB search
MHRIQGQNRLAGPAQGDHGFQGQSREPFKIREQIKLEALDSDEEEKQQPLAMASNSIFES
FSSYQSCFSREPVPGRRFTPPSTTLSSGKMNEGLPLGAQENSGAALVGKLRMADRSMVEV
LSDHPGELMRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENYS
AELRNATAGIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPR
EPRRHRQKPDEAVKPGTLAFSEQLRRSAMRCSPHHGPAPNPRPALNTPPFSSPAHSQISD
SRQMQTSPSWSYEQSYPYLGPISTPAVHPTTPISPSRSALHCPDLTAFTDPRVSLERSFP
SLPSLPDGRFSDPRVPYPTGAFTYTPTPVTNAIGIGMSAMTSPAGRYHTYLPPAYPAGSS
QAQAGPFQAGSSPYHLYYSSAAGSYQFSMMPGGGGGGERSPPRILPPCTNASTGSALLHP
SLPNQSEVVVEAEGSHSSSPTSMSVEAVWRPY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaatccaaggacagaaccgcctcgctggaccagcgcaaggcgaccatgggttt
caggggcaaagccgggagcccttcaaaattcgggagcagatcaagttggaagcgttggat
tcggacgaagaggagaagcagcagccgctcgcaatggcctcgaacagcatcttcgaaagt
ttctcgtcctaccagtcttgcttctccagggaacctgtgcctgggcgacgcttcacgcct
ccctcaacaaccctgagctcggggaagatgaatgaggggttgcccctaggggctcaggag
aacagcggcgccgccctggtgggcaaactgcgcatggctgaccgaagcatggtggaggtg
ctttccgaccacccaggagagctgatgcgcaccgacagccctaatttcctctgttctgtc
ctgccaacacactggcgctgcaacaagacgctgcccatcgccttcaaggtagttgccctt
ggcgacatccctgatggcaccctagtcacagtgatggccggcaatgatgagaattactct
gccgaacttcggaacgccacagctggcatcaagaaccaagtggcccgttttaatgatctg
cgttttgttggccgcagcggacgagggaagagttttactctcaccatcactgtcttcaca
aaccctcctcaggtggccacgtatcagagagccataaaaattactgtagacggaccccgc
gaaccacgacgccaccgacagaagcctgatgaagcagtaaagccaggcacgttagctttc
tctgagcaattgaggcgaagtgccatgcggtgcagtccacaccatggccctgcccccaac
ccccgtcccgccctcaacacgccccccttcagcagtcctgcccacagccagatttccgat
tctaggcagatgcaaacgtctccatcctggtcgtacgagcagtcatacccttacctgggc
cccatctctaccccagcggttcaccccaccacacccatctcacccagccgcagcgcttta
cactgtccagatctgacggcgttcactgaccctcgtgtcagtctggagcgttccttccca
tcgctcccctctctcccggatggccgtttctcagacccacgggttccctacccaaccgga
gcgttcacatacacgcccacccctgtcaccaacgccatcggcattggcatgtcagccatg
accagcccggcgggccgctaccacacatacttacccccagcataccctgcgggctcctcc
caggctcaggccggacccttccaggccggttcgtccccatatcacctgtactacagcagt
gctgccggctcttaccagttttccatgatgccaggcggaggaggagggggcgagcgctca
ccgccacgcatcttaccgccctgcaccaatgcctccacaggctctgccctcttgcacccc
tctctgcccaatcagagcgaggtggtggtggaggcagagggaagccacagtagttcacca
accagcatgtcagtggaagccgtctggaggccgtattga
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