Cyprinus carpio (common carp): 109071102
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Entry
109071102 CDS
T05134
Symbol
rexo1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109071102 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109071102 (rexo1)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
RNases
109071102 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
109071102
NCBI-ProteinID:
XP_042617997
Ensembl:
ENSCCRG00000026406
ENSCCRG00000047618
LinkDB
All DBs
Position
A8
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AA seq
1220 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCESSNGKAGADGCCRPYCHFRHSKQRRGSCGIYDIKKTKELSAS
PNDQGYDPFSPEVVRPGEHYNGEPLSILLAGQDVELELVNRAIEAVRNEMERDKKKLSQI
GDQEYEPTTSSVKRPKPTASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSDNSSTNSLE
YVPTAVSKKGIKKVLPPPSRVKCKYTLDNSKPTSDMEYDPLSNYSAKPAVKQQRNLCSEG
EGRKRFYPEKQGEDEEYVPTAKKPRSLSPKAYAPKYTASFSESDEESSGTEYRPTSISRM
QRKGINISLKKERESGAMGLQGNRVSKTDEVFSQSESDDVESQDVDRTNKKDKKAPVSQS
KNIKSDKLKKEEKESNKKSQKERWESSTSKNSSKKDKNQSKNEDRISKSKEKVRKDGSES
KSTDEKNKKIVKIKSEHCYKEKDGRGSGDIKKPKMDKPVKTDMVSSKIKVQKNGKLENST
KEKGKNKSSHGSSSTKGKSQKSSSVLDHKEASETKQRNLSHIDLFGAESAEEDDEEDERI
VRKSASAFKRGSLMKNKRKTSEDTSSSSSEDDSEVDDDDDGGGGDEAVDYSCLQDEMEYD
SDPMEECLRIFNESKEVKTEDKGRQAKQVPHRVFIYFSSCDNHFSHFESTLTTLFPGQKK
RVSHFKAQGKSGASLNAVPMVQRRMTAQEICYQRMQKAQQQAAQLAAAVKAASASTIPKL
GLSGEKRRVAHRPNASLPSSKPGLADASSRVLSPTRVATDQLSVKAHTSVGILSKTTSTT
MQKRVAHTPTMKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKFCSSEQEAFQMAL
EEEKVVCDRSSSKNIYLNVAVNTLKKLRSKSTPTSPAIKSPAVSVNRKSQSHEEVLGGRL
AATTSFTINRSGKQLDVDPKGANLYKTLKKYAMTEEQLQEHGYPRPHPEVSGHAVVHNLP
EKKNNDPFSKICCRCGTEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSCCSGAV
GSPGCEVCKQHVQDGRKESLDGFVKTFNKPLPVDGNGGVYALDCEMWFXXFVLYIXIVTV
INSDLKVIYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAESILIG
HSLESDLFALKLIHCLVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSED
ARACMELMIWKIKEDAKVKR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtctacgggtttttttcgtgggattgactgcccgttttattgtgagagtagt
aatggaaaagccggtgcagatgggtgctgcagaccctactgtcacttcagacacagcaaa
caaagacgaggctcctgtgggatatacgacatcaaaaagactaaagagctttctgcgagc
ccaaacgatcaaggatatgatccattcagtccggaggttgtaagaccgggtgaacattat
aatggggagccactgtcgatcctgttggcgggacaggatgtggagctggagttggtcaat
cgggccattgaggctgttcgcaatgagatggaaagggacaagaagaagctttctcagatc
ggtgatcaggaatatgagccgaccacaagctctgttaagagaccgaaacccactgcatca
tcccatcagggctacgatcctgggagctatcaaatgggccaagcgagtgaatacaccccg
tcccctcgctccagcaaatacactttagactcagacaacagcagtaccaattcactggaa
tatgtgcccactgctgtctccaaaaaagggattaaaaaggtgttacccccaccgtcccgt
gtaaagtgtaaatacactctggataattccaaaccaacctcggacatggagtacgaccct
ctctcgaactattcggctaagccggctgtgaaacaacaaaggaatctgtgttcagaggga
gaggggagaaagaggttttaccctgaaaaacaaggggaagatgaggaatatgttccaacg
gcaaagaagccaaggtcgctgtctcctaaagcatatgccccgaagtacactgcaagtttc
tctgaatccgacgaggaaagttctgggacagagtatcgtccgacgtccataagccgaatg
cagcgcaaggggatcaacatcagcttgaaaaaggaacgagagtcaggtgcgatgggactg
caaggaaatcgggtgtctaaaactgatgaggtcttctcacagagcgaatcggatgatgtg
gagtcgcaggatgtggacaggacaaacaaaaaagacaaaaaggcgcctgtgagtcagtcg
aaaaatataaaatctgataagctgaaaaaagaggagaaggaatccaataagaagagtcaa
aaagaaaggtgggaaagctctacttcgaagaattcaagtaaaaaagacaagaaccaaagt
aagaatgaggacagaatcagtaagtctaaggaaaaggttcggaaagatggttcggagtca
aagagtactgatgaaaagaacaagaagatagttaagataaagagtgaacattgctacaag
gaaaaagatggaagaggaagtggcgacatcaagaagcccaaaatggacaagcctgtgaaa
accgatatggtgtcgtccaaaatcaaagtccagaagaacggaaaacttgagaacagcaca
aaggagaagggcaaaaacaaaagcagccatgggagcagcagcactaaaggaaaaagccaa
aaaagcagctcagtccttgatcacaaagaggcaagtgagaccaaacagaggaatctgagc
cacatagacctgttcggtgctgagagcgctgaagaggatgacgaggaagacgagaggata
gtgaggaagtcagcttctgcttttaaacggggaagcctcatgaagaataagaggaaaacg
tctgaagatacatcatcatcatcatcggaggatgactctgaagtggatgatgatgatgat
ggtggtggtggggatgaagcagtggactactcctgtctgcaggatgagatggagtatgac
tcggacccgatggaggagtgtctgcggatatttaatgaatccaaagaggtgaagacggaa
gacaaagggagacaagctaagcaggtaccacacagagtttttatttatttctctagttgt
gataatcatttcagtcattttgaaagcactttaactactctctttcctggccagaagaag
agggtgtcacattttaaagctcaaggaaagtcaggggcatcgctgaacgctgtgccgatg
gtgcagcggaggatgacagcgcaggagatctgttaccagcgcatgcagaaggcccagcag
caggcggcacagctggctgctgcagtaaaggctgcatctgcatcgaccatcccaaaactg
gggctctctggggagaaacggcgggtggcgcaccggccaaatgcttccttgccctcctca
aagcctggactagctgatgccagcagtcgggtgttatcacccaccagagtggcgacagat
cagctttcagtcaaagctcatacatcggtgggcatcctgtcaaagaccacatcaactact
atgcagaaaagagtggctcacacccccaccatgaagagctctgccatgaagcgtcctgtc
attcctgcagaatttggggccaaggtgcccactaatgtccggcagcgttacctaaacatc
ttcattgatgagtgcctgaagttttgttcctctgaacaggaagcttttcagatggctctg
gaggaagagaaggtggtgtgtgacaggagcagcagtaagaacatctacctgaatgtagct
gtgaacacactgaagaaacttcgcagcaagagcacacctacatcccctgccatcaagagc
ccggctgtatctgtgaatagaaagtctcagtcccatgaagaagtacttggtggacgacta
gctgccacaaccagcttcacaatcaaccgctccggcaaacagctggatgtggaccctaaa
ggtgccaatctttacaaaacactgaaaaaatatgcaatgactgaagaacagctgcaggag
catggttaccccagacctcaccctgaggtgtcgggtcatgctgtcgtccataacctccca
gagaagaaaaacaatgaccctttttccaaaatctgttgtcgatgtggcaccgagtacaag
ataaacgctaatggcagctgtgtgcgtaaggaggagtgcagtcaccactggggaagatta
cgcagaaacagagttccaggaggttgggagacactttacagctgttgctctggtgcggtt
ggttctcctggatgtgaagtgtgtaaacaacatgtacaagatggccgtaaagagtccttg
gatggttttgtgaagacttttaacaaaccgttgccagtagatggaaatggaggtgtctat
gccttggactgtgagatgtggttttaatagtttgttttgtatatttaaattgtgaccgtc
ataaactctgacctcaaggttatttatgacacatttgtcaagcctggcagcaaagtggtg
gattataacacacggttttcaggtgtgacacaggatgatctggagaacaccaccatcacc
ctgagagatgtgcaggcggtgctactgagcatgttcagtgcagagtccattctgattgga
cacagtcttgagagtgacctgtttgcactcaagcttattcactgcttggttgtggacacc
gctatcgtgtttcctcatcgcctgggtttgccctacaaacgtgccctgcgcaaccttatg
gccgactacctcaaacgcatcatacaagacaacgttggagggcacgactccagtgaagat
gcccgggcctgcatggaactcatgatctggaagatcaaagaggatgccaaggtgaagaga
tga
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integrated database retrieval system
