Cyprinus carpio (common carp): 109071204 Help Entry 109071204         CDS       T05134                                  Name (RefSeq) DNA ligase 3-like   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism ccar  Cyprinus carpio (common carp) Pathway ccar03410   Base excision repair Brite KEGG Orthology (KO) [BR:ccar00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     109071204  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccar03400]     109071204 Enzymes [BR:ccar01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109071204 DNA repair and recombination proteins [BR:ccar03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      109071204 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  109071204 NCBI-ProteinID:  XP_042612864 Ensembl:  ENSCCRG00000021784 UniProt:  A0A9R0AWI4 LinkDB All DBs Position A5:complement(32386927..32400260) Genome browser AA seq 1012 aa AA seqDB search MPSLWLGRAVRTLSRSSLLKLCKKTSFRATPNHQSLQCSRTLIFSWGFVSSPSGIFFCVP QIRQFSLSSGSYFHVSWPEWQSERPLMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRIGK IVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIDDITELEGWEELQDDDKELINKHV SELAAKGNSTPKKKVQAKLNNSGQLSAPLADPTVNAPRKFSGFTASKAGSSSSTPLQHPH KNTNHSTSSTNQLYHNNNKDCLLREFRKLCAIVAEKSGYNAKTEIIRDFLTKGSGGDKFR GDLYLTVKLLLPGVVKNVYNLNDKQIVKLFSRILNCSQDEMVQDLEQGDVSETVRIFFEQ SKFFPPAAKSLLTIQEVDASLSRLSQLTKEDDQQAELQDIAKMCTGNDLKCYIRLVKHDL KINSGAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQQDASNGTGPRKILSVEASLMTP VQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNDNHFSYFSRSLKPVLPHKVAH FKDFIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAQVGLFVFDCIYF NGISLMDKPLCERRKFLHDNMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLK DIKGHYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPES RKWCTVTKCSGGYDDATLARLQKELDVIKIGKDPSKIPGWLKIVKNYYPDFIIRDPEKAP VWEITGAEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNLQQLKELYRISKENCDFDL TAGPSKTSQNDKSSSGGESGGSSPSASHGASTANKTKNAHTPKAKAVKTKSSSPAVKRKL PAEKQDAKKIKTEPLHSNGQSKLQTVQTTDPKNEKTLLDIFTGVKLYLPDSVQEFEKLRR YFLAYDGDLVPVYDSVSATHTLGETEDDSPAQRVTSNWIWECIRKRRVVPPS NT seq 3039 nt NT seq  +upstreamnt  +downstreamnt atgcccagtctttggcttggcagggcagtgaggacactcagcagatcatctttgctgaaa ctttgtaagaaaacttcattcagagcaacaccaaatcatcagtctctccagtgttcgagg actcttatattttcgtggggctttgtgtctagccccagtggcatctttttctgtgtgcca caaattcgacagtttagtctcagctccggctcttatttccacgtttcttggcctgagtgg caaagtgaacgaccactcatggcagagcagagatactgtgtggaatatgccaaacgtggc acggctggctgcaagaaatgcaaagacaagatcatgaagggactggtccggattggcaag atagtgccaaacccttttagtgagtctgcaggggaaatgaaggagtggtaccacgtgaag tgcatttttgagaagcttgagagagcgcgtgccaccacaaagaagatcgacgacatcaca gagctggagggatgggaagaacttcaggacgacgataaagaactaatcaataaacacgtt tcagaactggcagccaaaggcaattcaaccccaaagaagaaagtgcaagcaaagttaaac aacagtgggcagctgtcagcaccgcttgctgatccaacagtcaatgctcctcgcaagttt tctggcttcacagcttccaaggcaggttcctcttcctccacacccctacaacatccacac aaaaacaccaatcatagcacctcctcaacaaatcaactataccacaacaacaataaagac tgcttactgcgggagttccgcaaactttgtgccatagtcgcagagaagtccggctataac gccaagacagagatcatcagagacttcttgacaaaaggctctggtggagacaaattccgt ggagatttgtacctgacagtgaagcttctcctcccaggagtggttaagaatgtctacaac ctcaatgacaaacagattgtcaagcttttcagccgcatattgaattgcagtcaggatgag atggtgcaagacttggaacagggagatgtttccgagacggtgcggatatttttcgagcag agtaagtttttccctccagcagccaagagtcttctgactatccaagaggtggatgcttca ctgagccgtctatcccaactcacaaaggaggatgatcagcaggcagagctgcaggacatt gctaaaatgtgcaccggaaatgatctgaagtgttacattcgcttggtcaaacatgatctt aaaatcaactctggggctaaacatgttttggatgctgtggaccctaatgcctatgatgcc ttcaaagcctcccgtaaccttggtgacgtaattgaccgggtgctacggaaccagcaggat gcttctaatggaacagggcccagaaagatcctcagcgtggaggcgtctctgatgaccccc gtacagccaatgctggcagaagcatgcaagtccattgagtatgccatgaagaagtgtcct aatgggatgtattctgagatcaagtatgatggtgagcgtgtgcaggtccataagaatgac aatcacttcagttacttcagtcgaagtctcaaaccagtactcccacacaaggtcgcccat tttaaagatttcataccgcaggcatttcctggtggccatagcatgatccttgatgctgaa gttcttcttattgatacaaagactagcaaaccgttgccttttgggactcttggagtacac aagaaagcagctttccaggatgctcaagtgggtctgttcgtgttcgactgcatttatttt aatggtatcagtctcatggacaagcctctctgtgagagaagaaagtttctccatgacaat atggtggaagttcctaacaggattcttttctcagaaatgaagcatgtcacgagagctgct gacctggcagaaatgatcacacgtgtcatcagagaaggactggaggggttggttctgaag gatatcaagggacattatgaaccaggcaaacgtcactggttgaaggtgaagaaggactat ctgaatgaaggagcaatggcagacactgctgaccttgtggtgcttggagctttctatggc aaaggctcaaatggtggaattatgtccagtttcctcatgggatgctatgacccagaatcc aggaagtggtgcactgtgaccaagtgttcaggaggctatgacgacgccacattagccaga ctacagaaggagttggacgttatcaaaattgggaaggatccaagcaagatcccaggatgg ttgaagatcgtcaagaactattacccagatttcattatccgtgatccagaaaaagcacca gtttgggaaataacaggagcagaattttccaaatcagaaatgcacactgcagatggcata tccattcgcttcccacgatgcactcgaatgcgagacgacaaggattggaagactgccact aaccttcagcagctcaaggagctgtatcgtatttcaaaggagaactgtgattttgatctg acagctggtccgtccaaaactagccaaaatgacaagagctcctcaggaggcgagagtgga ggaagctctccttctgcatctcatggagcttccacagctaacaagaccaaaaatgctcat actcccaaagcaaaggcagtgaaaaccaaatcctcttcgccagcagttaagaggaaacta cccgcagagaaacaagatgccaagaagataaaaacagaacctcttcacagcaatggacaa agcaaattgcagaccgttcaaacaactgacccaaagaatgaaaagacactactggacatt ttcacaggtgtgaagctttacctcccagattcagtgcaggaatttgagaagcttcggcgc tacttcctagcgtacgatggagatctggtgcctgtgtatgactctgtttcagccacacat acactgggagagacggaggacgacagtccggcccagagggtcacctccaactggatctgg gaatgcatccgaaagaggagggtggttcctcccagctga

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