Cyprinus carpio (common carp): 109071306
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Entry
109071306 CDS
T05134
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like
KO
K20478
golgin subfamily B member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109071306
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
109071306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAM76
HMMR_N
CCDC138_cc
COG5_N
Motif
Other DBs
NCBI-GeneID:
109071306
NCBI-ProteinID:
XP_042631730
UniProt:
A0A9Q9Z5F5
LinkDB
All DBs
Position
A18:11386838..11411678
Genome browser
AA seq
1737 aa
AA seq
DB search
MGSDMRFAEVTEQLTQMEELVAHLKELIREKDAALSSKDNQVMELTEQMQHLRGERENFQ
SKMEAERHITRARIKDLMEKHEAELLRAADKHESELAEKEQALRRQLETLQRSISQPTDA
SANLSTCITAQRVTELQAQVKLKEAEASKAEAKFLKMKAWSKSRIRQLEEELKKVQSGSC
LDMSPDVTSLNSRITELQEEREEILSKLELYEDMKAKNDELQKQLKEYEEQQRKMQADLE
QVTKRAASQAMIYLFVLLWFKLWLNRCNRHPFVSCCFYLYSRMMFRVEWQEMITMVTEAE
RVQDQGHEKNVMAFRMSHIEEEREELIEDDWLFPGCSDPALANRQQEVEEELAQARGLCP
QKSRKPKYFTPHSLQEDLEYHNRQDLIGHTDCDVFVNGENMGGWWPQHSAAVTDGLRSVV
EELELERNQLQEQILVLEKQCQDLEDRLQLQARIELLQATFGIDEGGQALSASQNESERL
QAQAASLRSQQIRDTEKHQLLIASLNKQLKGLSSTQECLESSLMEKEHTLARTSVKLEYI
DSLREALETKEKQNQETTEKLLQTEHNLADVTKTCSNFEKENSEMKATVAELTLKLSVLK
DKIQKQEATIESLQNDLVQTNDDLDRLNAAHLEERAQLVHDLQSCEREIDRLQDVIIDKD
KDISALTTCTAEYSEQNHELKREMKFKEDVLTKIEQDVQIFRDPQLSDQQFFNLLIPQLI
EQLKRTETDLKVERKDGESKSNEIKDLIKQTEEDKKTIHDLRMETQKLIMNLKDQLLDRE
QVHDKVSFQEERNKLLAEVSKYKSELLMFSRKLEEQVECQEQLKQDIQDKSTIISSMEEK
LKIVQEKTVAERDIFNKELKIRDEAKENLEKQLTDKIESIQSVNNNNQKLQESLEQTLGE
LARQKQHLDNAKEQMQAVQDQNYNLLLQVESLTNDSCQLKREIEASVQSISDVSEEKKSL
ASKISEVEQKLSESVKTIEHLQRDKEELTLKGNELSKELEQNKQSLDKIFLEKDGIVRLY
ETLSRQNQQSQEMFEEKQKEVLTLAQVVSEMNNKVAITLEENEKRASRIASLDEQNKYLQ
KQTNEQMKLLTETTKERDNLQNKILILETQDVENRNIIEGLLKQKEDLLLQVEEHKNIEK
KLQSGAETLQEKSIECAALSKCLSETKEEVDCLRRELESTTSQVLQYKQIVFEKEKTLTD
QSAQMETYQHQLQQLQDSISILQEQANNHKSGLTEKDILLQKESNVCYLLQKELTHEREL
VLTLQQEISYLKIEWSRLNQTLEVKESTLREKNLECHNHSEELYKRNESVLSLTSQLGIM
NENIAKLESDNAHLKGTLEEHLAENVRLKDKLREKQIEVVEYQDNVQAMNDQNIVIKSEL
KNSMAEIFRQQEMITSLQSELESKRVELASLAEQLESKHSQLEALQFTLQGKEEVFRTQE
MSVNKMHVKLLESESQITQKITVISELHEEIQNLQTALQEKDRLLLNKDKEFSLVKKTLM
AQSESCEAKLKLEMDEIAKIQRELKSFQEKNNHLVRIINENDSLLMQEKDKCLHLQGSAS
ELENTVSLLTGQIERLTSEITQLRETQTEKEQVTFAAQAQIQKLDELYKKLQEEYDLTKQ
ELLKVINEKSLKEEEICKLVLEKEEICRNSSYQIQRIQDQLQHHKWESSKDKKKKLESVA
LQGKGVSQEHWVQLHGHLQHCQQEIQQRDFSLQQLNIKVCIQNVPSGKQNKVLYLLP
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgatatgagattcgctgaggtcactgagcagctaacacagatggaggaactt
gtggcccatttaaaagagttgatcagggaaaaggatgcggcactcagcagtaaagataac
caagtcatggagctgacagaacaaatgcagcacttgcggggtgagagagaaaactttcag
tcaaagatggaggcagaacgtcacattactcgggctcggatcaaggatctgatggagaaa
catgaggcagagctgctcagggctgctgataaacacgagtctgagttggcagagaaggag
caggccttacgcagacagcttgagactctccagcgctctatatcacagcccacagatgca
tcagcaaacctatccacctgcattacagctcagagagtcacagagttgcaagcccaagtg
aagctgaaagaagcagaggccagtaaagcagaagcaaagttcttaaaaatgaaggcatgg
tccaaatcccgaatcaggcagctcgaggaggaactcaaaaaagttcagtctggatcatgt
ctcgatatgtcccctgatgtcacgtccctaaatagtcgcattactgaattgcaagaggag
agggaggaaatactcagcaaactggagctgtatgaagatatgaaggcaaaaaatgatgaa
ctacagaagcagcttaaggaatatgaggaacagcagaggaagatgcaggccgacctggag
caggtgaccaagagagcagcatcacaggcaatgatatatttatttgttttgctttggttc
aaactttggttaaaccgctgtaacagacatccatttgtgtcttgttgcttttatttatat
agcaggatgatgttcagagtggagtggcaagaaatgataaccatggtgactgaggcagaa
agggttcaagatcagggtcacgagaagaacgtcatggccttcagaatgagccatatcgag
gaggagagagaggaactgattgaggatgactggttgtttcctggctgctccgatccagca
ttagccaatcggcaacaggaagtggaggaggagttggcccaggcccgtggactctgccca
cagaaaagcagaaagcccaaatatttcaccccacacagcctacaggaggacttggagtat
cataatagacaagacctaattggccatactgattgcgatgtttttgtgaatggagagaat
atgggtggatggtggccccagcacagtgctgcagttacagatggcttgaggtctgttgtt
gaggagctcgaattagagagaaaccaactgcaggaacagattttggtccttgagaaacag
tgccaagatctagaggaccgtctgcaacttcaggctcgcattgaattactacaggcgacg
tttggtatagatgaaggtggtcaagcattgtccgcatctcagaatgaatctgagcgcctg
caggcacaggctgccagccttcgcagtcagcagattagagacacagaaaagcatcagctg
ctcattgccagcctgaacaaacaactcaaaggactgagcagcacacaggagtgtctggag
tcctcactcatggaaaaggagcacacgcttgccagaacctctgtgaaactggaatatatt
gacagtctgagagaggctttagagacaaaagaaaaacaaaaccaagaaacaactgaaaaa
ctgcttcaaactgaacacaatctggctgatgttacaaagacatgcagcaactttgagaag
gaaaactctgagatgaaagcaactgttgcagaactgaccctcaaactcagtgtgctgaaa
gacaagatccaaaaacaagaggcaactatagaatcattacagaatgatctggttcaaaca
aacgatgatcttgacagactgaacgcagctcatctggaagaaagagcacagctggttcat
gacttgcagagctgtgagcgtgaaatcgatagacttcaagatgtcatcattgataaggac
aaagatatatctgcactaacaacctgcacggcagaatactcagagcaaaatcatgaacta
aaacgggaaatgaagttcaaagaggatgtgctgactaaaattgaacaggatgttcaaatc
tttagagacccacagctttctgaccaacagttctttaatttgttaataccacagctgatt
gaacaattgaagaggactgaaactgatctaaaagtagagagaaaagatggtgagtcaaag
agtaatgaaattaaagacttaataaagcaaacagaagaggataagaaaaccattcacgat
ctccgcatggaaacacagaagctgattatgaatctcaaagaccagctattggatagagaa
caagtgcatgacaaagtctctttccaggaggaacgtaataagttgcttgctgaagtcagc
aaatataagagtgagcttctgatgttctctagaaagcttgaggagcaagttgaatgtcaa
gaacagcttaagcaagatatccaagacaagtcaacgataatatcttcaatggaggagaag
ctgaagatcgttcaagagaagacagtagcagagagagatatatttaacaaagaactcaag
attcgagatgaagccaaagaaaaccttgagaaacagttgactgataaaattgagagtatt
caatcggtgaacaataacaaccagaaacttcaggaatcgcttgagcagactttgggagag
cttgcaagacaaaagcagcacctggataatgctaaggagcaaatgcaagctgtgcaagat
cagaattacaacttgcttttacaagtcgaaagtctcactaatgacagttgtcaattgaag
agggaaattgaggctagtgtccagtccatctctgatgtttcagaagaaaagaaaagtttg
gcaagcaaaatatctgaagttgaacagaagctttcagaaagtgttaaaacaatagaacac
ttgcaaagagataaggaagagctaacactcaaaggaaatgaactgagcaaagaacttgag
caaaacaaacagtcacttgataagatttttttagaaaaagatggcattgttagactctat
gagacattgagtaggcaaaatcaacaatcacaagaaatgtttgaagagaaacaaaaagaa
gtgcttacactggcccaagttgtgtctgaaatgaataacaaggttgcgataacacttgaa
gaaaatgaaaaacgtgcttctagaattgctagtcttgatgaacagaataagtaccttcag
aaacaaacaaatgaacagatgaagttactcacagaaacaaccaaggagagggacaatcta
caaaacaaaatcttgattttagaaacacaggatgtggaaaaccgtaacatcatagaaggc
ttgcttaagcaaaaggaagatttgcttttgcaagtagaggaacataaaaatattgaaaag
aaactgcagtctggagctgagaccttacaggaaaagtctatagaatgtgcagccctctca
aaatgtctcagtgagaccaaagaggaagtagattgtcttaggagagaacttgaatccacc
acttctcaagtccttcaatacaaacagattgtttttgaaaaagaaaagaccttaacagac
caaagtgcacaaatggaaacttatcagcaccaacttcagcaattacaagatagtatttcc
attcttcaagaacaagctaataatcataaatcgggtctgacagagaaagacatactgctg
cagaaagaatcaaatgtatgttatttgctacaaaaggaacttactcacgaaagagaactt
gttttaacccttcaacaagagataagctatctgaaaatagagtggtccagactgaaccag
actttggaagtgaaagaaagcactttaagggagaaaaatcttgaatgccacaatcactca
gaggaattgtacaaaagaaatgagtcagttctttcactaactagtcagcttggtattatg
aatgaaaatattgcgaagcttgaatctgataacgcacatttaaaaggcactttagaggag
catttagcagaaaatgtaagattaaaagacaagttgagagagaaacaaatagaggttgtg
gaatatcaagataatgtccaggcaatgaatgaccaaaacattgtaattaaatctgaactc
aagaattcaatggcagaaatattcagacaacaagagatgataacgtccctacaaagtgaa
ttggaaagtaaaagagttgaactggcatctttggcagaacagttagaatccaagcactct
caactcgaagctttacagttcactctgcaggggaaagaggaagttttcaggacacaggag
atgtctgtaaataagatgcatgtcaaactgttggaaagtgagagccaaatcacccagaaa
ataacagtgatctctgagctacatgaagaaattcagaatttgcagacagctttgcaagaa
aaagataggttgctgttaaataaagataaagagttttctctggttaagaagacattaatg
gcacaatcagaatcatgtgaagccaaactgaaattagaaatggacgaaattgctaaaatt
caaagagagttaaagagcttccaagaaaagaataaccatctcgtcagaatcattaatgaa
aatgattctttattgatgcaggagaaggacaagtgtctgcacttgcaaggtagtgcatct
gaactggaaaacacagtttcactgctgaccggtcaaatagagcgattaacctcagagatc
acacaactcagggaaacacaaactgagaaggaacaagtcacttttgctgctcaggcgcaa
atacagaaactggatgaactatacaagaaacttcaagaggaatacgatttgaccaaacaa
gagttgcttaaagttatcaatgaaaaatcattaaaggaagaagaaatctgtaaattggtc
ctggaaaaagaagagatctgcagaaattccagttatcagattcagagaattcaggaccag
ctacaacaccacaagtgggaatccagcaaagataaaaaaaaaaaactggagtcagtggct
ttgcagggtaaaggtgtgtctcaagaacactgggtccagttgcatggccatctgcaacac
tgccagcaagagatccagcaaagagattttagcctccaacaactcaacatcaaggtatgc
atccaaaatgttccatctggaaaacaaaataaagtgttatatttactgccgtga
DBGET
integrated database retrieval system
