Cyprinus carpio (common carp): 109071587
Help
Entry
109071587 CDS
T05134
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109071587
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109071587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109071587
NCBI-ProteinID:
XP_042604836
Ensembl:
ENSCCRG00000023750
LinkDB
All DBs
Position
B22:complement(23231461..23283242)
Genome browser
AA seq
1451 aa
AA seq
DB search
MPSLSIPPAMDGHIFSHSDGPQLDAGGFIHAPPVSHVFANNPWSFPHQTYSLPCPVQSEN
QQQLLLGPSDMHTDLFPNGLSDFDLPSLNLTQNEDLPLDLHCLDDLSIFSPPTDSLTEYT
VNNLINTDMPPNVPTIWDIKTPASVQELNSNRFQGLNSLDDITAIINTPPIGGYQRPQTQ
PEEEEEVEVEEAEELGHVDTYADYRPSKSKIGISHPDRVVETNTLSSVPPPDITYTLSIP
ETTINSGQLSALQLEAIIYTCQQHEVILQNNQRAGFLIGDGAGVGKGRTVAGIILENYLK
GRKKALWFSVSNDLKYDAERDLQDIGAPNIQVHALNKIKYGDTATSEGVLFATYSALIGE
SQAGGQLRTRLKQILDWCEPGFDGVIIFDECHKAKNATSTKMGKAVLDLQNKLPSARVVY
ASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHAIEKRGVGAMEIVAMDMKVSGMYIA
RQLSFSGVSFRIEEISLDEDFKLVYNKAAKLWAEALVEFMEAADELCMSSTKSLWGQFWS
SHQRFFKYLCIAAKVRCLVELAKKELEAGKCVVIGLQSTGEARTREVLDENDGHLDRFVS
AAEGVFQSLVLKHFPSEKQMREKGAGNKRKRKPRGRQPKQPRHGTYVAGVINISDDSSTE
SDVLDSDSNSSPDSVQDNNDDVIFVDQTSYQMARLEEKKQGLLNKIAELGKELPLNTLDE
LIDKFGGPEQVSEMTGRKGRVVRRPDGSVQYESRAEQSHTIDQINIKEKDRFMNGEKLVA
IISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIFLI
SELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDKTTKAILGQ
IESKVPPPQDYPGGDAMFFRDMKHGMKDVGMLCSQSRLGISTEKDCNISKFLNRILGLEV
HKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDQIYEETQEKFLTAGNPQDGQV
ILYKISVDRGMPWLEALQKAQTLSNPDEGFYLSHKLRGNYPCVLLAVQGQERNMIIYKPN
IGKQAQTESLENLQHKYRKVTPEEARDSWENQFTFSFRKCSHANWNGRCKKVDEGQECLM
GTRLRQYHMLCGALLRVWKRVSDVVADITSSSILQIVRLKTKDSSKQVGIKIPENCISKV
RQELVRMDAEVKQRRREKEQQAQEQRQAEEQQRLMAQRQLQDFFTPNLFTTLQPPNMPSL
PTPYVSFPSFPSIKNPLEEILDLTLPNSSSSSQVSTQADLGVDNLSRQADPTVDDFNLEF
IQEQPQQESQAIQESNSARDKDLLDMLMSLNSFITPLSQTIPASSSSDAPSSSVPMVFPN
TFSSSLSNFTPSLTPSSSPLVSLPPTDQQMLPLPNNHCSSEAIINVREVLNSMLQGGTES
HHSVIKYQQPE
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgctctccattccgcctgccatggacgggcacatcttttcacattcggacgga
cctcaactggatgccggggggttcatccatgcaccccctgtgagccatgtgtttgccaac
aacccttggagcttcccccatcagacctacagcttgccctgtcctgtgcaatctgaaaac
cagcagcagcttctcctcggcccgtcggacatgcacacggatttgtttcccaacggcctc
agcgactttgacttgccgagtctgaatctcactcagaatgaagaccttcctctggacctc
cattgtctggatgatctgtcgatcttctcccctccgaccgactccttaaccgaatacacc
gttaataacttaattaatactgacatgcctcccaacgtgcccacgatatgggacatcaaa
acaccagcatcagtccaagagttgaattctaacaggtttcaaggattaaactcgttagat
gacatcactgctatcattaatacaccacccataggaggttatcagagaccccaaacacag
ccagaagaggaagaggaagtcgaggtggaagaggcagaagagctgggtcatgttgacacc
tatgcagactacagaccctctaaatccaagataggaatatcccatccagaccgagtggtg
gaaaccaacactttgtccagcgtacctcctccagatatcacctacaccctgtccatccca
gagaccaccataaacagcggccagctctctgccttgcagctggaggccattatctacacc
tgccagcaacatgaagtgattctgcagaacaaccagcgggctggcttcctcataggggat
ggcgccggagtgggcaaaggccgcacagtggctggcatcattctagaaaactacctaaag
ggaaggaagaaagcactatggttcagcgtctccaatgacctgaaatatgacgcagagaga
gatctccaagacatcggtgcacccaatatacaagtgcatgccttgaataagataaagtac
ggagacacagctacctcagaaggggtcctgtttgcgacctactctgcactaatcggggag
agtcaggcgggcggccaactccgaacgcgcctgaagcagatcttagactggtgtgagccg
ggttttgatggagttattatatttgacgaatgccacaaagccaaaaacgcaacatccaca
aagatgggcaaggccgtgctggatctgcagaacaagttaccgtcagccagagtggtatac
gccagtgccacaggtgcctctgagccaaagaacatgatctacatgagccgcctggggatc
tggggagagggaacgcccttcagaacctttgacgacttcctccacgccattgagaagagg
ggcgtgggggccatggagatcgttgcaatggatatgaaggtcagcgggatgtacatcgca
cgccagctcagcttctcaggagtctcattccgcatagaagagatcagtttggatgaagat
ttcaaacttgtgtacaacaaagctgctaaactttgggcggaagctttggtcgagttcatg
gaggccgctgacgagctctgcatgagttccacgaaatccctgtggggtcagttttggtcg
tcccaccagcgtttttttaaatacctctgcatcgccgccaaggttcgctgccttgtggaa
ctggccaaaaaggagctggaagcaggaaagtgtgtcgtgataggactacagtcaacaggt
gaggctcgaaccagagaagtccttgacgaaaacgacggacacttggacagatttgtctct
gctgccgagggtgtgtttcagtcgctggtcctcaaacactttccgtccgagaagcagatg
agagaaaaaggagcggggaacaagaggaaacgtaagccacggggacggcagccaaagcaa
ccccggcacggcacttatgtagcgggagtgatcaacatcagcgatgacagcagcacagag
tctgacgtcttggatagcgactccaactcctcgccagactcagtccaagacaacaatgac
gatgtcatcttcgtcgatcaaaccagctaccaaatggcacggttagaggagaagaaacaa
gggcttctcaacaagatcgctgagctgggaaaagaactacctcttaacacactggatgag
ctcattgataagtttggaggtccagaacaagtatcagagatgacgggacgcaaaggccga
gtggtgcgtcgacctgacggcagcgtccaatatgagtctcgcgctgagcagagccacact
atcgaccaaatcaacatcaaagagaaagatcgcttcatgaatggagagaagttggtagcc
atcatatcagaagcggccagttctgggatctcacttcaggctgacagaagggtgaagaat
cagcgtcggagggttcacatgaccctggagctcccttggagtgcagacagggccatccag
cagtttggtcgtactcatcgttccaatcaggtcacagcaccagagtacatcttcctcatc
tccgaactggccggcgagcgacgatttgcatccatcgtggcaaagaggctggagagtttg
ggagctctgactcatggtgacaggagggccacagagtctagagaccttagcaaatacaac
tttgaaaataaatatggcaccaaagctctagataagactaccaaagccatccttggtcag
atcgaaagcaaggtaccccctccacaggactatcctggtggtgacgccatgttcttcaga
gacatgaagcacggtatgaaggacgtaggcatgctatgcagtcagtcacgcttgggcatc
agcactgaaaaagactgcaatatcagcaagttcctcaaccggatactgggcctagaggtg
cacaaacagaactcactcttccagtactttacagacaatttcgactacttgattgaaaag
gacaagaaagagggcaaatatgatatgggaatactggatctggcaccaggcaacgatcag
atttatgaagaaacacaggagaagtttctaacagcgggaaatcctcaagatggtcaagtt
atcctgtacaagataagtgtagatagaggtatgccatggttggaggctctccagaaggcc
caaactctcagcaacccggatgaaggcttctatttatcccataaactgagaggtaactat
ccatgcgtgctgctagccgtgcaaggccaggagcgcaacatgatcatctacaaaccaaac
atcggcaagcaggcccaaacggaaagccttgagaacctccaacataaataccgcaaggtc
actccggaggaggcacgggatagctgggaaaaccagttcacgttctccttcaggaaatgc
agccatgctaactggaacgggaggtgcaaaaaggtagacgagggtcaggagtgcttaatg
ggcactcgattgcgtcagtatcacatgttgtgtggcgctttgctccgcgtttggaagcgc
gtgtctgatgtggtcgctgacatcaccagctccagcattctccaaattgtccgcctcaag
accaaggacagcagcaaacaagttggtatcaagatcccagagaactgcatttcaaaggtg
cgtcaggagttggtgaggatggatgcagaggtaaagcagcgacgtcgagagaaggagcag
caagctcaggagcagcgtcaggccgaggagcaacagaggctgatggcacagcgtcagctt
caagacttcttcaccccgaatttgttcaccactttgcaaccccccaacatgcccagctta
ccaaccccatacgtttccttcccctcattcccttccattaaaaaccctttggaagaaatc
ctggacttgacgcttcccaattcctcgtcctcctcccaagttagcactcaagctgacctg
ggtgtggacaacctctccaggcaagccgaccctacggtggacgacttcaaccttgagttt
attcaagagcagccgcagcaggagagccaggccatacaggaaagcaattcagcacgggac
aaagacctgttagacatgctaatgtccttgaactcatttataacaccccttagtcagact
atccctgcctcttcctcctcagatgcaccttcgtcatcggtacccatggtctttccaaat
accttctcttcttccttgtccaacttcactccctcgctcacaccatcttcctcgccgctc
gtctctctcccccctacggaccaacagatgctcccgttacccaacaaccactgcagctct
gaagccatcataaacgtacgagaggtgttgaacagcatgctgcaaggtggaacagaatca
caccactctgtcattaagtaccaacaacccgagtga
DBGET
integrated database retrieval system
