Cyprinus carpio (common carp): 109072004
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Entry
109072004 CDS
T05134
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109072004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109072004
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109072004
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109072004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoprotein_6
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
109072004
NCBI-ProteinID:
XP_042614068
UniProt:
A0A8C1PN55
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All DBs
Position
A6:complement(13894932..13906569)
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AA seq
673 aa
AA seq
DB search
MTVFVVSGGCYIGRVKMAENISLLGLEEELTCSICLCLFENPVSLICGHSFCANCLEATW
NDSVSSMSCPQCRMVFLSKPELKKNTVLSAVLDAYRIKAGVSEPVKEHFEVKKKDPDEIK
CDNCMEAKAVKTCLTCMASYCEDHVRPHRENAIFRAHQLADPLPDLMERLCSDHGKLMEF
YCSQHQSCICSTCLQDMHKGCEFITADERRFKQKTDLTDKLNILEVKTDKNQQVITQMKE
QQNKLKDSAVTRKRILEAEYRQIREMIDRDEKEAILAIDKEQEKGQSKLVSLMKKFNENI
EKMNRTKSEINSLLDQSQSLEFLKAYVDLPSVVIFEPYNPRINLEGKEVIAYHSSAVALK
EWITKLMDHPLENRISVLKPGNQFPVFLSETPALLQNPRDMSHMRSPSPDPVPKAKLSGA
KQKTSNKSVNKDQKDHKERKDQKPNKSRNHSKGANPVFSKSMDIDNADKTVDIPDINSLA
ISPAVQNFIKRSDLLKYGTILNFDFRTAHKRISLSENNTKATVSDETAHYPDIPLRFSVC
SQVLCTKGFSQGRHYWEIKMSSNNFCGLGLAYGRINRKGPSSRLGRNADSWCVEWFNVKL
SAWHNSIETVLQNPNPSRVGVLLDCDQGSATFYNVQDRIYPFHTFVFPFTEALYPAFWIF
SNGSSVSLCKLNN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgttcgttgtcagtggtggatgttacattggacgtgtcaaaatggcggaaaat
atatctctattgggtctcgaggaagagttgacttgcagtatctgtttatgtctattcgag
aatccggtgagtttaatctgtggtcacagtttctgcgccaactgtctcgaagcgacatgg
aacgacagtgtgtcatctatgtcctgccctcagtgccgaatggtgttcctcagtaaacct
gaactaaagaagaacaccgtcctcagcgcggtgctcgatgcctatagaataaaagcgggt
gtttctgaacccgtcaaggaacattttgaggtgaaaaagaaagatccagatgagatcaaa
tgtgacaactgcatggaagccaaagcggtcaaaacttgtctgacatgtatggcgtcttat
tgtgaggatcatgtcaggcctcaccgagagaatgccatttttcgggcccatcaactggct
gatcccctgccagatctgatggagcgtctctgttcagatcatggcaaattgatggagttc
tactgcagtcagcaccagagttgcatttgcagtacctgtctgcaggacatgcataaaggc
tgtgagtttatcacggcagatgagcggcgcttcaaacaaaagactgacctgactgacaag
ctcaacatccttgaagtcaaaactgacaagaatcagcaggttatcacacagatgaaggag
caacaaaacaaattaaaggactcagctgtaacccgcaagcgtattcttgaggctgaatac
aggcagatcagagaaatgattgaccgagatgagaaagaagccattcttgctatcgataag
gaacaggagaaaggtcagagcaaactggtctccctgatgaagaaattcaatgagaacatc
gagaagatgaataggaccaaatctgagatcaacagtctgctggaccagtcacagtcacta
gaattcttaaaggcctacgtggatttgccctcagtggtaatttttgagccctataaccct
cgcataaatctggaaggtaaagaggtgattgcttatcattcctctgcagttgcactgaag
gaatggatcaccaaattaatggatcatccattagaaaacagaatctctgtacttaaacca
ggaaaccagttcccagtattcctaagtgagactcctgcccttctgcaaaatccaagagac
atgtcacatatgagatctcccagtccagatcccgttcccaaagccaagctttcaggagct
aaacagaaaacttcaaacaagagtgttaataaagatcaaaaggaccacaaagagcgtaaa
gaccagaagccaaacaaatctaggaatcactctaaaggagcaaatcccgttttctccaaa
agcatggacattgacaatgcagataaaactgtagacatccctgacataaattcacttgct
atttcaccagctgtgcaaaactttattaaaagaagtgaccttcttaaatatggtactatc
ctcaattttgacttcagaacagctcacaagcggatctcactgtctgaaaacaacaccaaa
gcgacagtctcggacgaaactgctcactatccagatattccccttcgcttttctgtctgt
tcccaggtgctctgcacaaagggtttctctcagggccgtcattattgggagatcaaaatg
agcagtaacaacttctgcggattgggacttgcatatggaagaatcaaccgcaagggtccc
tctagccgtctggggcgtaatgcagactcctggtgtgtggagtggtttaacgtcaagctt
tctgcatggcacaacagcatcgagacggtgctgcagaatcccaacccaagccgcgtgggc
gtcttgctggactgtgatcagggaagtgcaacattctataatgtgcaggaccggatctac
cccttccacacatttgtctttcctttcactgaggctttatatccagctttttggatcttc
tcaaatggttcttctgtctctttgtgcaagctcaacaactga
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