Cyprinus carpio (common carp): 109072166
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Entry
109072166 CDS
T05134
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109072166 (irx1a)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109072166 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Paramyxo_PNT
Nop14
MRP-S32
Motif
Other DBs
NCBI-GeneID:
109072166
NCBI-ProteinID:
XP_042611442
Ensembl:
ENSCCRG00000034460
UniProt:
A0A9Q9Y0K2
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GRSKEDEDANIFGSDNEGDAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDEEKRGELEA
FEKSKSDAISGSKEPSDGNNNNTRVLSPGRQGGFPVPVSNKPKIWSLAETATSPDSLQKP
TSPSVPATHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVSQHHHNHPVHS
QQQQHSSAVASSMAAVNSEKAPEDLSPKHIAPETSRNRHRGSSQLSLPLDQDICTAHRTE
DTHKGTMNTKAVHLNIQLL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggttacccgcagtatttaagtgcctcccaggcggtgtacgga
ggtgatcggccgggagtgctgactccgtcgtcccgcggagggagcgctgagatcgggggg
agcgcgtcggcggccgccgctgccgtgtcctcggtgctgggcatgtacccctacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctcccagatgggc
tctcagtacgatttaaaagacagtcctggcgtgcaccccgccagcttcgctgcccacacg
agcccggccttctacccctacggtcagttccagtacggagacccctcgaggcccaagaac
gccacgcgggagagcaccagcactctgaaggcctggctcaacgagcacaggaagaacccc
taccccaccaaaggagagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccagaagaagactcaagaaggagaacaaggtgacctgg
ggcagaagcaaagaggacgaagacgccaacatttttgggagcgacaacgagggggacgcc
gagaagaacgaagacgaggaggaaatagatttggagagcatagatatcgacaagatcgac
gacaacgacggagatcaaagcaacgaggaggacgaggagaagcgcggggagctcgaggcc
ttcgagaaatccaaatccgacgccatttccggcagcaaagagccgtcggacggaaacaac
aacaacaccagggttctgtcgccgggtcgccagggaggttttccagttccggttagcaat
aagcccaaaatatggtcgttggcagaaaccgcgaccagtcccgatagcttgcagaaacct
acgtcaccctcggttcccgccactcacccggccttcctgccgagccacggactgtacacg
tgccagatcgggaagttccacaactggaccaatggcgcgttcctgggccagaactccctg
ctgaacgtgcggtcgttcctgggcgtcagtcagcatcaccacaatcacccggtccactca
cagcagcagcagcactcgtcggcggtggcgtcatccatggcagccgtgaacagtgagaag
gcgccagaggacctgagcccgaaacacatagccccagaaaccagcaggaatcgacacaga
gggtcctcacagctctctcttccgcttgatcaagacatttgcaccgcacacaggactgaa
gacactcataaagggacaatgaacactaaagcagttcatcttaacattcagttactctaa
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