Cyprinus carpio (common carp): 109072570
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Entry
109072570 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 33A-like
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
ccar04148
Efferocytosis
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109072570
04148 Efferocytosis
109072570
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109072570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109072570
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109072570
Hops complex
109072570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF7816
Motif
Other DBs
NCBI-GeneID:
109072570
NCBI-ProteinID:
XP_042613361
Ensembl:
ENSCCRG00000038425
UniProt:
A0A9Q9Y5H8
LinkDB
All DBs
Position
A5:37474502..37484061
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AA seq
554 aa
AA seq
DB search
MASHLFCGRVNLNILREAARKDLREFLDKCSGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRIPSAAVKNIVFFVRPRLELMDIIAENVASEDKLHPRDFHILFVPRRSLLC
EQRLKEKGVLNSFTNIDEYILDLIPYDGDLLSMESESSFRECYLESDQTSLYHAAKGLMT
LQALYGTIPQIFGKGECARHVANMMLRMKREFAGSHTQILPVCIDSFFLLXNVDLLTPLA
TQLTYEGLIDEIFSITNGYVKLPPEKFAQKKQGEGGKDLPTEPKKLQLNSAEELYAEIRD
KNFNAVGAALSKKAKVISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAELI
KDITTSEDFFDSLTVEQEFMTGVDTDKVSTYIEDCVAQKDPLIKILRLVCMQSVCNNGLK
QKVLDFYKREILQTYGYKHILTLKNLEKVGLLKPQSTMRNNYPTIRKTLKLWMEDTNEQN
PNDISYVYSGYAPLSVRLTQVLARPGWRSIEEVLKMLPGPHFEERQQVPTGLHKKRQPGK
TGTKQTTLSSFLAV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacatttgttttgcggcagagtaaacctaaatattttgagagaggctgcacga
aaagacctgcgcgaatttttagataaatgttcgggaagcaaggccatagtttgggacgag
tatcttactggacctttcgggttaattgctcagtattcccttttgaaggagcatgaagtc
gagaaaatgttcactctcaaaggtggtcggataccatccgctgccgtcaagaatattgtc
ttttttgtgcgaccgaggctggaattgatggacatcattgcagaaaatgttgcaagtgag
gataaattacatccacgagacttccacatcctgtttgtgccgcgccggagtctcctgtgt
gaacagcggctgaaggagaaaggggttctgaactccttcacaaacatcgatgaatacatt
ctggaccttatcccttatgatggagatcttctctccatggagtctgagagctcctttaga
gaatgttatttagagagcgatcagacgagcctgtatcacgctgccaagggcctcatgact
ttgcaagcactttatggaacaataccgcaaatctttggcaaaggcgagtgtgcaaggcat
gtggccaacatgatgctgcggatgaagagagagtttgcagggagtcatactcaaatcctg
cccgtgtgtatagattccttctttttgttgngcaacgtggacttgctgacgccattagcc
acccaactcacctatgagggtcttatcgatgagatcttcagcatcaccaatggttacgtg
aagctaccgcctgagaagtttgcacagaagaagcagggagaaggtgggaaggatctcccc
actgagccgaaaaaactgcagctcaactcagccgaggagctttacgctgaaatacgggac
aagaacttcaatgctgttggagcggctctcagcaagaaagccaaggttatatcagctgcg
tttgaggagcgacacaatgcaaaaactgttggagagattaaacagtttgtttcgcagctg
cctcacatgcaggcggcccggagctccctggctaatcacacctccatcgctgaactcatc
aaggacataacaacctcagaagacttctttgacagtctgaccgttgagcaagagtttatg
actggagtagacacagacaaggtcagcacatatatagaagactgcgtagcacaaaaagac
cccctgataaagatcctgcgactggtctgcatgcagtctgtctgcaacaacggcctcaaa
cagaaggtcctggacttctataagagagagatccttcagacgtatggttacaagcacatt
ctaactctcaagaacttggaaaaggttgggctactcaaacctcaaagcaccatgagaaac
aactaccccacaatcaggaaaaccctcaaactgtggatggaggataccaatgaacagaac
cccaacgacatctcgtatgtgtacagtggctatgcgccgctgagtgttcgcctgacacaa
gtgctcgctcgtcctggctggaggagcatcgaggaggtgctgaagatgctgcctggtcca
cacttcgaagagagacagcaggtccccacaggccttcacaagaagcgtcagcctggaaaa
acaggaaccaaacagaccaccctgtcttctttcttggcggtgtga
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