Cyprinus carpio (common carp): 109072607
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Entry
109072607 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar00310
Lysine degradation
ccar00514
Other types of O-glycan biosynthesis
ccar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109072607
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109072607
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccar01003
]
109072607
Enzymes [BR:
ccar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109072607
Glycosyltransferases [BR:
ccar01003
]
O-Glycan biosynthesis
O-linked Gal type
109072607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
IF4E
Motif
Other DBs
NCBI-GeneID:
109072607
NCBI-ProteinID:
XP_042623756
Ensembl:
ENSCCRG00000044046
UniProt:
A0A9Q9YQA8
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Position
A12:complement(15764726..15777189)
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AA seq
604 aa
AA seq
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MYLLCFFFLLLWSGPVRSYFPEERWSPESALLAPRVLLALVCRNSAHSLPHVLGAIDRLN
YPKDRMAVWVATDHNSDNTTAILREWLINVQNFYHYVEWRPQEEPSVYEDPRGPKHWTSL
RYEHVMKLRQAALDTAREMWADYFSVVDCDNLLTNQDVLWQLMQENKTIVAPMLESRAAY
SNFWCGMTSQGYYKRTPAYMPIRRQEKKGCFAVPMVHSTFLLDLRKEASRGLAFFPPHPD
YSWAFDDIIIFAFSARMAEVQMYICNRETYGYFPVPLRSHNTLQDEADSFLHSLLEVMVR
SPPSEPSVYLSLPPKQPDKMGFDEVFMINLLRRSDRRERMLRTLYEQEIACKITAAVDGK
ALNTSQIEALGIQMLPGYSDPYHGRPLTKGELGCFLSHFNIWTEIVDRGLKTSLVIEDDL
RFEVFFKRRLQNLMEEIESQRLDWDLIYIGRKRMQVDRPEKSVPRIHNLVEADYSYWTLG
YMISLRGAQKLLRAEPLKNMLPVDEFLPVMYNKHPIEDYMSHFERRDLQAFSAEPLLVYP
THYTGDAGYISDTETSTVWDNETVRTDWDRARSRKSSEQEELSTEAQNSDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgctgtgtttctttttcctgctgctatggagcggtccggtgcgcagttatttc
ccggaggagcgctggagcccggagtccgcgctgctcgcgccgcgggtgctgctcgcgctg
gtgtgccgcaactcggcgcactctctgccgcacgtcctcggtgccatcgaccgtctcaac
taccccaaagaccgcatggctgtatgggtggccacagatcataattcagacaacaccact
gcaatcctgcgcgaatggctgataaacgtccagaacttctatcattatgtggagtggaga
cctcaggaggagcccagcgtctatgaggatccgagaggcccgaagcactggacgagtctg
cggtacgagcacgtgatgaagctgcgtcaggcagccctcgacacggcgcgggagatgtgg
gccgactacttttctgtggtggactgtgataacctcctgaccaaccaggacgttttatgg
cagctgatgcaggagaacaagacgatcgtggcgccgatgctggagtccagagcggcgtac
tcaaacttctggtgcggcatgacgtctcagggttattataagcggacgccggcctacatg
cccatccgcaggcaggagaagaagggctgcttcgccgtgcccatggttcactccaccttc
ctgctggatctgaggaaggaggcgtcccgtgggctggccttcttcccgcctcatcccgac
tacagctgggccttcgacgacatcatcatcttcgccttctccgcgcgcatggcagaggtt
cagatgtacatctgcaacagagagacttatgggtatttccccgtgcccctgcgctcccat
aataccttgcaggacgaggcggacagttttctgcactcgctgctggaggttatggtgcgc
agtcctccatcagagccgtccgtgtatctctctcttcctcctaaacagcctgataaaatg
ggcttcgatgaggtgtttatgataaacctgctgaggcgctcggaccgcagagagcgcatg
ctcaggactctgtatgaacaagagatcgcctgcaagatcaccgccgctgtagatggcaag
gcgctgaacaccagtcagatcgaggcgctggggatccagatgctccccggatacagcgac
ccgtatcacggccggccgctcactaaaggagagctgggctgcttcctgtcacacttcaac
atctggacagagattgtggatcggggactgaagacgtctctggtgatcgaggacgacctg
cgctttgaggttttctttaagcgtcgtctgcagaatctgatggaggagatcgagtctcag
cggctggactgggacttgatttacatcggccgcaagcggatgcaggtggaccggccggag
aaatctgtgcccagaatacacaacctggtggaggcggattactcgtactggacgctggga
tacatgatctcgctgcgcggcgctcagaagctgctgcgggccgaaccgctcaaaaacatg
ctgccggtggacgagttcctgcccgtcatgtacaacaaacaccccatcgaggactacatg
tctcacttcgagcggcgggatctgcaagcgttttcggccgagccgctgctggtttacccc
acgcactacacgggcgacgcaggctacatcagcgacacggagacctccaccgtctgggac
aacgagacggtccgcaccgactgggaccgagcgcgatcacgcaagagcagcgagcaggag
gagctcagcaccgaggcgcagaactcagacgtgcttcagtctccgctggacagcacggcc
cgcgacgagctctag
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