Cyprinus carpio (common carp): 109072872
Help
Entry
109072872 CDS
T05134
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109072872
04121 Ubiquitin system [BR:
ccar04121
]
109072872
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109072872
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109072872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF7108_C
Motif
Other DBs
NCBI-GeneID:
109072872
NCBI-ProteinID:
XP_042624146
UniProt:
A0A9Q9YR07
LinkDB
All DBs
Position
A12:complement(26162757..26166653)
Genome browser
AA seq
561 aa
AA seq
DB search
MMYHLNKVHPSLVNVGGGASCSRSQPSIKSALARTRSCDAQRAEKITQGICKFLEMDIPP
LSVVEGNGFRELIHLLEPAYQIPSRRTITRLVETHYEERKQQLLKELSKAERVALTTDCW
TALTAESYITITCHYISDDWQMNTAVLLTESLPGRHTADHLAEKMNGAVDQWGLKGRVIA
CVHDNAANIVAANSPTRVPWISVACFAHTLQLAINDGFALYLHRVISAASKLVSHFNHST
TATKALQKKQEQMGLATHRLTQSCKTRWNSVCEMFDRLVEQRWAVVAVLSDRTVTKLQDA
RILELKDEYWQLMEDTQPVLSALKCPTMVMSAEKDVSILNTYPVTFGLINIHLMRNEGDG
PRLIEFKTKVRSSLIQRMNIESGEFVSFAPMISSMLDPRHKHLGFLTPTQRLAANVKLVE
LGEAVGTDRAAIQQAGGVEAALSDTDEGSANTEVATSQSSAMAQLLGDHYTTQCEAGIET
ELQNFLRETSPPLNCTPRNWWKVNGIRFPRLAKLAWRYLCIPATSVPSERVFSAAGLTVT
RLRSRLTSDHVNMLIFLNKNQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatgtaccacttaaacaaagtgcatccgtctctggttaatgtcggtggcggtgcatcc
tgctctcggtctcaacctagcatcaagtcagcgttagcacggactcggagctgtgatgca
caacgagcagagaaaattacccaagggatctgcaagttccttgagatggatattccgccc
ttaagtgttgttgagggcaatggttttcgagaactgatacatttattggaaccagcatat
caaattccatcacgacgcaccataaccagactggtagaaactcactacgaagaacgaaag
cagcagctgttaaaagaattgagcaaagctgagagagttgctctaactacagactgctgg
accgctttaacagctgagagctacatcaccataacctgccactacatcagtgatgactgg
caaatgaacacagcggtcctgctcacagaaagcctgccaggccggcatacagctgaccac
ctcgctgagaaaatgaatggagctgtagaccagtggggacttaaaggccgagttattgca
tgcgttcatgacaacgcggccaatattgtagctgccaacagtcccaccagagtgccctgg
atttccgttgcctgctttgcacacaccctccagttggccataaatgacggatttgcactg
tatcttcatcgggtaatatcagcggctagtaaactcgttagccactttaatcacagcact
acagcaaccaaagcgctgcaaaagaaacaggagcaaatgggcctcgcaactcaccggctt
acccagtcgtgtaaaacacggtggaactccgtgtgcgagatgtttgatcggctggtggag
cagcggtgggctgttgttgctgtgctgtcggaccgaaccgtgaccaagcttcaagatgcc
aggatcctggagttgaaggatgagtactggcagctgatggaggacacacagcccgtgctg
tcagcacttaaatgtcccaccatggttatgtctgcagagaaagacgtctccatcttgaac
acttatcccgtcaccttcggcctcatcaatatccacctcatgcgcaatgaaggagacggg
cccagactcatcgaattcaagacaaaagtgcgttcctctctcatccaacgaatgaatatt
gagtctggtgagtttgtgtcattcgcccccatgatctcatcaatgctggaccctcgtcac
aaacacctgggctttcttacaccaacacagagactggctgctaatgtgaaactggttgaa
ctgggagaggcggtggggaccgatagggcggctatccaacaggctgggggagtcgaggct
gcgttgtctgacacggacgaggggagcgcaaacactgaagtcgcgacctcccagtcatct
gctatggcacaactccttggggatcactataccactcaatgcgaggctggcatcgaaaca
gaacttcagaactttctgagggagacttccccacccctgaattgcacacctagaaattgg
tggaaagtgaatggaataaggtttcctaggctggccaagttagcgtggcggtacctgtgc
atcccggcaacgtcagtcccctcagagcgggtgttttcggcggctggactgacggtcacc
aggttgcggtcgcgtctgacctcagatcatgtcaacatgcttatatttctcaacaaaaat
cagtaa
DBGET
integrated database retrieval system
