Entry |
|
Name |
(RefSeq) transcription factor SOX-30-like
|
KO |
K09271 | transcription factor SOX15/30 |
|
Organism |
ccar Cyprinus carpio (common carp)
|
Brite |
KEGG Orthology (KO) [BR:ccar00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:ccar03000]
109073003
Transcription factors [BR:ccar03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109073003
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
B21:15643618..15646083
|
AA seq |
389 aa
MDKHPKLRAKKRFRNVEKGSTTDEPVPKCAKTEEKLILKKPGPPAVKAQRVSEPTEVNSL
TTHRQYHPQDEGFNSINSPLTGDLGIKQDSAEWDTFPLYPSGQTSMVLTADKAIPQFFSF
KDMPQSFNCNLSSEAPISETYFPIVTHQPISEASVQINTRGLSFTQPPSGTESEVARSQN
KTVSIKRPMNAFFLWSKIHRPALSKANPNASNCDISVQLGLEWHKLSEEQKKPYYEEARR
IMAQHMEKYPDWVYKPCREKKKHSVSRRPPVVPATQISTPFILTWAQRPNPYPEPLTSAR
GQSSLNSPANINQAMEMQQGFINTDQCPLSAPRCIFSADLHMTGQQFYPAESIPCSSSSS
HLIDFMSHYEDLRQEAPVQNCEYCLHYGD |
NT seq |
1170 nt +upstreamnt +downstreamnt
atggataaacaccccaaactgagagctaagaagaggttcagaaacgttgaaaagggctca
acaactgatgaaccggtaccaaaatgtgccaaaacggaagaaaaattaattttgaagaaa
cccggtcctcctgctgtcaaagctcaacgagtcagtgaaccaactgaagttaacagccta
acaactcacagacaatatcatccacaagatgaaggttttaactcgatcaacagcccatta
acaggagatcttgggattaaacaggacagcgccgaatgggatacatttccactttatccc
tcaggtcaaacttcaatggtgctaaccgctgataaagcaattcctcagtttttctcattt
aaagacatgccgcagtcatttaactgcaatttgtccagtgaggcgccaatcagcgagact
tattttccgatagtaacccatcagccaatcagcgaggcttctgtgcagatcaacacccga
ggtctgagcttcactcagccgccttctggaacagaaagtgaggtggcaagatctcagaac
aaaacagtttctatcaaaaggcccatgaatgccttcttcttatggtcaaagatccaccgg
cctgccttgtctaaggccaaccctaacgccagcaactgcgacatcagtgttcagctgggg
ttagaatggcacaaactgtctgaagagcagaagaagccatactacgaagaagcccgcaga
atcatggctcaacacatggagaagtacccagattgggtctataagccgtgcagagagaaa
aagaagcattccgtgtccagaaggccaccggtcgtccctgcgacccaaatctccacaccc
ttcattctgacatgggcacagagacccaacccttacccagagcccctaacatcagcgaga
gggcagagcagtctaaattctccagccaacattaaccaggccatggagatgcaacaaggt
tttatcaacacagatcagtgtcctctctctgctcctcgatgtatcttctctgcagacctc
cacatgactggacagcagttctacccagcagaatccattccatgttcaagctcttctagc
catctcattgacttcatgagccactatgaagatctgaggcaagaggcgcctgtccaaaat
tgtgaatattgcctccattatggagactag |