Cyprinus carpio (common carp): 109073003
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Entry
109073003 CDS
T05134
Name
(RefSeq) transcription factor SOX-30-like
KO
K09271
transcription factor SOX15/30
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109073003
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109073003
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109073003
NCBI-ProteinID:
XP_018944738
Ensembl:
ENSCCRG00000030818
UniProt:
A0A7T4X3X1
LinkDB
All DBs
Position
B21:15643618..15646083
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AA seq
389 aa
AA seq
DB search
MDKHPKLRAKKRFRNVEKGSTTDEPVPKCAKTEEKLILKKPGPPAVKAQRVSEPTEVNSL
TTHRQYHPQDEGFNSINSPLTGDLGIKQDSAEWDTFPLYPSGQTSMVLTADKAIPQFFSF
KDMPQSFNCNLSSEAPISETYFPIVTHQPISEASVQINTRGLSFTQPPSGTESEVARSQN
KTVSIKRPMNAFFLWSKIHRPALSKANPNASNCDISVQLGLEWHKLSEEQKKPYYEEARR
IMAQHMEKYPDWVYKPCREKKKHSVSRRPPVVPATQISTPFILTWAQRPNPYPEPLTSAR
GQSSLNSPANINQAMEMQQGFINTDQCPLSAPRCIFSADLHMTGQQFYPAESIPCSSSSS
HLIDFMSHYEDLRQEAPVQNCEYCLHYGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaccccaaactgagagctaagaagaggttcagaaacgttgaaaagggctca
acaactgatgaaccggtaccaaaatgtgccaaaacggaagaaaaattaattttgaagaaa
cccggtcctcctgctgtcaaagctcaacgagtcagtgaaccaactgaagttaacagccta
acaactcacagacaatatcatccacaagatgaaggttttaactcgatcaacagcccatta
acaggagatcttgggattaaacaggacagcgccgaatgggatacatttccactttatccc
tcaggtcaaacttcaatggtgctaaccgctgataaagcaattcctcagtttttctcattt
aaagacatgccgcagtcatttaactgcaatttgtccagtgaggcgccaatcagcgagact
tattttccgatagtaacccatcagccaatcagcgaggcttctgtgcagatcaacacccga
ggtctgagcttcactcagccgccttctggaacagaaagtgaggtggcaagatctcagaac
aaaacagtttctatcaaaaggcccatgaatgccttcttcttatggtcaaagatccaccgg
cctgccttgtctaaggccaaccctaacgccagcaactgcgacatcagtgttcagctgggg
ttagaatggcacaaactgtctgaagagcagaagaagccatactacgaagaagcccgcaga
atcatggctcaacacatggagaagtacccagattgggtctataagccgtgcagagagaaa
aagaagcattccgtgtccagaaggccaccggtcgtccctgcgacccaaatctccacaccc
ttcattctgacatgggcacagagacccaacccttacccagagcccctaacatcagcgaga
gggcagagcagtctaaattctccagccaacattaaccaggccatggagatgcaacaaggt
tttatcaacacagatcagtgtcctctctctgctcctcgatgtatcttctctgcagacctc
cacatgactggacagcagttctacccagcagaatccattccatgttcaagctcttctagc
catctcattgacttcatgagccactatgaagatctgaggcaagaggcgcctgtccaaaat
tgtgaatattgcctccattatggagactag
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