Cyprinus carpio (common carp): 109073014
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Entry
109073014 CDS
T05134
Symbol
col4a3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04382
Cornified envelope formation
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109073014 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109073014 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109073014 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109073014 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109073014 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109073014 (col4a3)
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109073014 (col4a3)
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109073014 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109073014
NCBI-ProteinID:
XP_042595833
UniProt:
A0A9Q9X5W9
LinkDB
All DBs
Position
B15:23167475..23189741
Genome browser
AA seq
1603 aa
AA seq
DB search
MGLPGYPGEKGIQGHRGKEGPSGIPGENGNIGFPGMPGPKGSRGVSGTPGYSGPPGLPGF
PGKEGPRGPHGLPGCNGTKGDPGPPGSIGQMGAPGWQGMPGIQGPKGDSYYLQPSGQVKG
LCGFPGRDGDKGYPGLPGLPGPVGPEGPRGFPGIDGIPGPQGEKGLEGGSMVIPGPKGHK
GERGPPGVQGQKGIKLFVSGPKELKGDLGDPGDIGCPGPAGFRGRPGPKGEKGEIGWPGG
PGKSGKDGLTGESGLKGIPGDQGYPGVTGIAGGTGPKGDCGAPGVPGEFIVIDNGIKGQK
GFPGLPGPPGLPGSEGFIGIPGYTGPPGDGIPGPMGKPGPPGFRGVKGERGDPVPNRAGP
KGLDGPPGEQGPPGDPGPPGIPKADPRLGAKGLKGDRGLTGPQGLRGDPGNLGDQGELCR
LCAISVADPGPPGQRGNSGDPGEPGVGGYPGNKGCQGFKGPYGPPGPSGNLGLPGPPGPP
GPKGDIDMRHVLGEKGHKGNCGAEGPLGINGQDGRPGTPGLKGPPGAKGNPSPIGPKGKQ
GDPGICGELGRPGPMGSQGSMGVGQPGAPGEKGSMGVVGRQGNPGEPGEKGSSGLVQMTP
GNPGEPGQPGPPGQQGPPGNDGYGGIQGLPGFSGLKGEKGPSMPGGPGFTGPKGDKGVKG
KQGPPGYGSVGRPGPPGPPGNPGPKGEISFGSPGPKGRPGLPGDEGCLGQPGIPGPPGLS
GCPGQRGRDGPPGENGVRGPDGLPGMAGVSGYCTPGAKGDEGPLGIKGLDGPSGLPGLKG
PQGETGPPGHGVPGITGEIGIPGKIGDAGLVGIRGSKGFQGRDGSPGFPGTRGDQGSPGM
AGPPGVDGNPGPPGFQGPKGLMRRNGVPGDVGNPGNPGDRGACGLKGLPSNVMSPGDRGD
PGLPGLLGLPGPKGELGLPGNYGPCGKNGFPGRPGPPGPPGDAGQNGLPGNRGPDGYFGD
PGVMGFPGVKGLKGLPGVRGETGTPGVQGPTGPKGITGEPSPPGPGPQGQPGEKGEPGSP
GCRGERGEKGLCGTSGPPGFSGAPGERGEPGVPGVPGPPGAPGDEGLNGFSGPPGCEGPC
GPPGVPGSAGDPGPPGLRGDQGKDGFPGPAGDKGDRGCPAIGDPGPPGIKGEKGTKGCSG
PPGPCGLPGPFGPAGDIGPPGQLGEMGPRGFPGPPGACINGPKGEQGPNGSPGLQGLRGP
CGPAGDPGPGIKGDKGNIGPQGLVGSPGYVGDRGVPGLQGKDGDPGFKGPKGDMGPLGIA
GPVGQKGQCGPIGHPGLKGCKGMPGTKGSKGCDVVAQVMTLPGDPGFPGQVGEKGEPGEQ
GPKGLQGPKGTQGQRGSRGADGVVGQNGTPGPKGDTGPKGAKGFPGLSGEVGPKGSQGPP
GSRDGFFFTKHSQXEYLPACPPESKLVYSGYSLLFINGNNRAHGQDLGTVGSCLQMFSAM
PFLVCNPNDTCHYAFRNDYSYWLSTDTPISPNMELISDDLGSYISRCSVCEAPSNVIAVH
SQTTEIPECPRGWLSLWKGYSFVMQTGAGAEGSGQPLISPGSCLEEFRMVPFIECHDRGT
CNFYPDSFSYWLASLDPSKMFSTPVRQRVRQQDISRCQVCMKQ
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggggttacctggctatcctggtgaaaaaggaattcaggggcatcgaggaaaagaagga
ccttctggaattcccggtgaaaatggaaatattggatttccaggcatgcctggacctaaa
ggttctaggggagtttcagggacaccaggatactctggcccaccaggactaccggggttc
cctggaaaagaggggccgagagggcctcatggtctcccaggatgcaatggaacaaagggt
gatcctggtcccccaggctcaatagggcagatgggagctcctgggtggcagggaatgcca
ggaatccaaggacctaagggagatagctattacttgcaaccctctggacaagtgaaagga
ctttgtggttttccaggcagagatggagataaagggtacccgggattgccagggttacca
ggaccagttggaccagaggggcctagaggttttccaggaatagacggcattcctggacca
caaggagagaagggtctagagggtggaagcatggtaatacctggacccaaaggtcataag
ggggagaggggaccacctggtgtacaaggacaaaaaggcataaagttatttgtatcagga
ccaaaggagcttaagggtgaccttggggatcctggagacattggatgtcctggcccagct
ggtttccgtggtcgtcctggtcctaagggggagaaaggggaaattgggtggcctgggggt
ccgggaaaatccggaaaggatggactgacaggagaatcaggccttaagggaatccctgga
gaccaaggatatccaggagttactggaatagcagggggaacgggtccaaagggtgactgt
ggtgcccctggtgtccctggagagttcattgtaatagataatggtatcaaaggtcagaaa
ggttttcccgggcttccaggacctcctggtctaccaggtagtgaaggtttcattggaatt
cccggatatacaggtcctccaggggacggcatcccaggacctatgggaaaaccaggtccc
ccagggtttagaggtgtgaaaggggaaagaggagatcctgttcctaacagggcaggtccc
aaaggactagatggcccaccaggggaacaaggaccccctggtgacccaggacctccagga
attccaaaagccgacccccgcctgggagcaaaagggttaaagggtgacagaggcctaaca
ggccctcagggtctgcgtggagatcctgggaacctaggtgaccaaggagagctttgcagg
ctttgtgctatttctgttgctgaccctggacctccaggacaacgtggaaattcaggagac
cccggagagccaggagttggaggatatccaggcaataaaggatgccaaggattcaaaggt
ccatatggtccacctggtccttcgggtaacttaggtcttccagggcctccagggcctcca
ggacccaaaggagacatagatatgaggcatgtgcttggggagaaaggtcataaaggaaac
tgtggtgcagaaggaccactggggataaatgggcaagatggcaggccaggtacccctggc
cttaaaggaccaccaggagcaaaaggaaatccaagtcctataggccccaagggcaaacaa
ggagatccagggatttgtggggaacttggccgcccaggtccaatgggcagccaagggtca
atgggtgttgggcaaccaggggcacctggagagaaaggaagtatgggagtagttggccgg
caaggaaatcccggagaaccaggtgagaaaggatcttcaggtctagtacaaatgacacca
ggaaacccaggtgagcccggacagcctggtccacctggtcaacaaggacctccaggtaat
gatggttatggaggaattcaaggattaccaggattcagcgggttaaaaggagagaaagga
ccatcaatgccaggaggtcctggatttactggtcccaaaggagataagggtgtgaaaggg
aaacaaggtccacctggttatggaagtgtaggccgtcctggacccccaggaccaccagga
aatccaggtccaaagggtgaaatatcatttggctctcctgggcccaagggtcggccgggc
ttgccaggagatgaagggtgccttgggcaaccaggaattcctggcccccctggattatca
ggatgtccaggtcaaagaggaagggatgggccaccaggagaaaatggtgtgcggggtcct
gatggtttgcctggaatggctggtgtttctggatactgtacgcctggagccaaaggcgat
gaagggcctttaggcattaaagggctagatggacccagtgggctgcctgggctgaagggg
ccacaaggtgaaactggaccacctggacatggtgtacctggtataacaggtgagattgga
atacctggaaaaatcggagatgctggtttggttggtatccggggatcaaaaggtttccaa
ggtcgggatggctcaccaggctttccaggtacacggggagatcagggaagtcctggaatg
gctggtccacctggagtagatggaaaccctggaccaccgggattccagggacccaaaggt
ttaatgagaaggaatggagtgccaggtgatgtaggaaatcccgggaatccaggagaccgt
ggggcttgtggtctcaaaggactgccatcaaatgttatgagtcctggggatcgtggtgac
cctggcctaccaggtcttcttggtctacctggccctaaaggggaattaggactcccaggc
aattatggaccatgtgggaagaatggatttccaggcagacctggtccaccaggccctcct
ggtgacgctggccagaacggacttcctggaaatcgaggtcctgatggatactttggggat
ccaggagtcatggggtttccaggagtgaaaggcctcaaaggtttacctggtgttcgtggg
gagactgggactcctggcgtccaaggtccaactggaccaaaggggatcacaggtgaaccc
agcccgcctgggccagggcctcaaggacaacctggtgaaaagggtgagccaggcagtcca
gggtgtagaggggaaaggggtgaaaagggtttatgtgggacgagtgggcccccaggtttt
tcaggggctcctggtgaaagaggcgaacctggagtaccaggagttccaggaccccctgga
gctccaggtgatgaaggtttaaatgggttttcaggtccacctggatgtgaagggccctgt
ggtccaccaggtgttcctggttcagctggagatcctgggcctccaggacttcgtggagac
caaggcaaggatggctttcctggaccagcaggggataaaggagacagagggtgcccggca
attggagatcctggcccacctggcatcaagggtgagaaaggtactaaaggctgttctgga
cccccagggccatgtggactaccaggaccttttggtccagctggagatattggtcctcca
ggccaacttggggaaatggggccgcgcgggtttccaggtccacctggtgcctgtatcaat
ggtccaaaaggggagcaaggccctaatggatcacctggcctacaaggactcaggggacca
tgtgggcctgctggcgacccaggtccaggcataaagggagataaaggcaacatcgggccc
caggggcttgtgggatcacctggttatgttggtgaccggggagttccagggttgcaaggt
aaagatggagatcctggtttcaagggtccaaaaggagatatggggccattgggtattgct
ggaccagtcggccaaaaaggacaatgtggtccaattgggcatcctggattaaaaggatgc
aaaggaatgcccggaactaaagggtctaaaggatgtgatgttgtggctcaggtcatgact
ctcccaggagaccctggcttccctggacaagtcggggaaaaaggagaaccaggagaacaa
ggacctaaagggctacaaggtccaaaaggaacacagggtcaaaggggaagcagaggtgca
gatggagttgttggacaaaatgggacacctggaccaaaaggagacactggcccaaaagga
gcaaaaggttttcccggtttgtcaggcgaagtgggtcccaagggttcacaaggtccacca
ggttcaagagacggattcttttttaccaagcatagtcagnnagaatatctgccagcctgt
cctcccgagtcaaaacttgtgtactctggatattcgcttctcttcatcaatggcaacaac
cgcgcacatggacaagacctaggaactgtgggaagctgtttgcaaatgttctctgccatg
cctttcctggtgtgcaatcccaacgacacatgtcactatgcctttcgaaatgattactcc
tattggctgtctacagacacaccgatttctcccaacatggaattgatatctgatgatttg
ggcagttatatcagcaggtgttcagtatgtgaggcaccatctaatgtaatagcagttcac
agccagactacagaaatcccagagtgccctagaggatggctttcactatggaaaggttat
tcctttgtaatgcaaacgggtgctggtgcagaaggttccggacagccactgatttctcct
ggatcctgtctggaagaattccggatggttccattcatagagtgtcatgaccgtggcact
tgtaacttctatcctgattccttcagctactggcttgcatcacttgatcctagcaaaatg
ttcagtactccagtccgccagagagtaagacagcaagacatcagccgctgtcaggtctgt
atgaagcagtag
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integrated database retrieval system
