Cyprinus carpio (common carp): 109073036
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Entry
109073036 CDS
T05134
Name
(RefSeq) homeobox protein SIX5-like
KO
K19474
homeobox protein SIX5
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109073036
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
109073036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109073036
NCBI-ProteinID:
XP_018944765
Ensembl:
ENSCCRG00000033089
UniProt:
A0A9Q9V6P6
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All DBs
Position
B18:complement(13053575..13058238)
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AA seq
957 aa
AA seq
DB search
MASLSLESTEQTENGPKESTQEEAKVKEEIDPDEVSEQLLQSFQNAALSFSTDQVACLCE
ALLQAGNVDRLWRFLSTIPPSADLLRGNETLLKAQALVAFHREEFNKLYAILDSHDFHPN
NHGFLQDLYLKARYKEAETSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNA
LKECYLINRYPTPVEKKNLAKVTGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHSTE
DEASKGDLDDIADKPAAQETGSSNASLISLSGAPCSTGQLILNSTGGFLTSSHPLLLNGS
PILSGAGTGVIINGLTLSDGHTVTLSPVTANAPLLLNGAQVIPKDDRGINDIEAQGSLPT
VVLNPQASLTNTIPLSLSEDAKTASSNVSPLDFISLPEALKNPDNTQSLLTNSVTSPIIS
TSVISPTSLSSVALVPNSIPASTTGSMSSVISSPMVPLLPTQPPEIVVIGKAESQSPIRS
SISSTQVLSLPQVVPSIQGIPVSQLMQHPSGATVSSCPQLVPVSPVNSQLPQVPIPHFQT
QTLHIGPRFAQAHPQNGSNTLSTSSALSLPQMADGQITQVLTPQLGDESTSHTLPQIQTS
MGTQVIPISSPTQVVPISQTKDSGQPQLVPLSLPQLMPVSSIAGTPTGTLSFPQVVPGTP
SLSIPSPGGAFQILTSGSGTGLSVAQGPIRLSPIGPPQSVPTGTIPGVQLLNSGVIQLPS
ASPGNILLAGGIGGSPILSVQNGKLILTIPAGIQFASMPVKSVPDNLVSNTLDPQTSPVH
PLENQPAPSLTALTSNSLQSSPLGFVGSSTLYCSPEPGTIANPTPGASPDTPDSSSTPTP
TSVLQFQQTLSPDSMLPLSPICSGVATGHQLSQLAWSPVPLSSSAGLTLFDMRGKGDLPE
DPALLGLPGGESLLLGTPPPGEDVERDSQLDEVEDMDGDSKILTQLQSVPVDDDLGL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtccacagaacaaactgaaaacggcccgaaggagtccacg
caagaggaagccaaagtgaaagaggagattgatccggacgaagtttcggaacaactgctc
caaagcttccagaacgcggcgctcagtttttccaccgatcaagtcgcgtgtctgtgcgaa
gcgctcctgcaagcgggcaatgtggatcgcctgtggagattcctctccaccatccctcct
tcggccgatctgctacgtggcaacgagaccctactgaaggcccaggctctggttgctttc
caccgggaggagttcaacaagttgtacgccatcctggacagtcatgacttccacccgaat
aaccatgggttccttcaagacctctacttgaaggcgcgctacaaggaggctgagacgtcc
cggggtcgcagtctgggcgccgtggataaatatcgactgcgcaaaaagtttcctttgccc
aaaactatttgggacggagaggagacggtgtactgcttcaaggagaagtcgcgcaatgct
ctcaaggagtgttatttgatcaacaggtatcccaccccggtcgagaagaagaatttagcc
aaagtcaccggactttctttgactcaagtcagcaactggttcaagaatcgccggcagagg
gaccggaccccctccggtaccaacagcaaaagtgaatctgatggaaaccacagtacagaa
gatgaagccagcaagggagatctggatgatattgctgacaaacctgctgctcaagagaca
ggcagctcaaatgcttctcttatatcactctctggggctccttgcagtactggtcagctt
attctcaacagcaccgggggattccttacaagctctcatccactgctgctcaatgggagc
cctatactctcaggggcaggaacgggggtcatcatcaatgggctgacactgagcgatggc
cacacagtcactctcagtcctgttacagctaatgcaccattgctactaaatggagctcaa
gtaatccccaaagatgaccggggcatcaatgatatagaggcccaaggcagcctgcccact
gtggttctgaatccccaagccagtctaactaacacaatacctctctcgctcagcgaggat
gcaaaaacagccagcagcaacgtctctccattggatttcatcagtcttccagaggccttg
aagaatccagataacactcagtcactgcttacaaactcagtgacctcacccatcatctct
acttctgtcatctctcccacatctctttcttcggtggcactggtcccaaatagtattcct
gcatcaacaactggctccatgagttcagtcatctccagtcccatggtgccactactgccc
acacagccacctgaaattgttgtaataggaaaagccgagtctcagtcaccaattcgcagc
tccatctctagcactcaggtgctgtctttaccccaggtggttccatcaatacagggcatt
ccagtttctcaactgatgcagcatccatctggggccacagtgtcatcctgcccccagctt
gttccagtctccccggtcaattcacagttaccccaagtccctattcctcattttcagaca
cagaccttgcacattggtccaagatttgcacaagcacacccccaaaatggctcgaacaca
ttaagcaccagtagtgctttatcactcccccagatggctgatgggcagattacacaagtg
cttacacctcagctaggagacgaatctacttcacatacccttccacaaatacagacctcc
atgggaacacaagtcattcccatctcctcgccgactcaagttgtgcccatatcccaaacc
aaagactcgggccaacctcagctggtccccctgtcactgccccaacttatgcctgtgtca
tccattgcgggaactccaactggaaccctgtcctttcctcaggtggtcccaggaacacca
tctctctccattccgtcccctggaggtgctttccagattctgacctctggatctggaaca
ggattgagtgttgcccaaggaccaatacgccttagtccaatagggcctcctcagagtgtc
cctactggtaccatcccaggtgttcagcttctcaactctggggtgattcagttaccttct
gcctctccaggcaacatcctactagcaggtggcattgggggcagccccatcctaagtgtt
caaaatggcaaactcatcctcactatcccagctggtatccagttcgccagcatgcctgtc
aagtccgtcccagacaatttggtctcaaatacccttgatcctcaaacctcacctgtacat
ccacttgaaaatcaaccagcaccttcactcactgctctaacctcaaattcactacaatca
tctcctttggggtttgttggctcctctacactttactgcagccctgagccaggaacaatt
gccaacccaaccccaggagcctctcctgacaccccagactcttctagcactcccactcct
acaagtgtcctacaattccagcagacccttagccctgatagcatgctcccactcagtcca
atatgtagcggtgtggcaactggccaccaactctcccagctagcctggagccctgtcccg
ctgtcctcctctgctggtctgacattatttgacatgcgtgggaaaggagatcttccagag
gaccctgctttgttaggattgccaggaggagaatccctactgttgggcactcctcctcca
ggcgaagatgtagagagagattctcaactggatgaggtggaggacatggatggggactcg
aaaattctgacacaacttcagtctgtccctgtggatgatgatctgggtttgtaa
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