Cyprinus carpio (common carp): 109073564
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Entry
109073564 CDS
T05134
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109073564
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109073564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
UL21a
Band_3_cyto
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
109073564
NCBI-ProteinID:
XP_042617814
Ensembl:
ENSCCRG00000011013
UniProt:
A0A9R0B067
LinkDB
All DBs
Position
A8:complement(7180456..7193849)
Genome browser
AA seq
1218 aa
AA seq
DB search
MAKIQARSSTAKQINPIQDKAYVVQKQVQQQHFQKLKYFSVEDALSYLDQVKIRFGNDPG
IYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFL
QSPPSSQPTWTFWQKTKEEAEQVSPGPGRSTGSSVVSASSSAVAEAGSAPNEAVTSPESV
ASSSGPPEQSSRLSLPLPSRESQSQPATTSVSPPTSEPSPVEFDSAISYVNKIKNRFLDN
PETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVASLFKGQEDLLAEFGQFLP
DAKRSLFTGGSLPGKDNLKKAEDEEMNKQSKKRPRPMLLPHMTPLLKKKMKYSCSKDPSF
ASVGKHGVLREFTFFDKVRRLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFP
ELYTQFKSFLGDKELSHSITGLSDRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSG
RTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRV
LESVQKKLSRLSPEDQERFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAV
PVVLKRLKAKEEEWREAQQSFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNE
IESIYDERQEQSTEEGGMGQQGRDGSGTGSTSEPHMIFTYEDKQILEDAASLIIYHVKRQ
PTIHKDDKDHIKRIIQHFVPDLFFARRGELSETEEFTDEEAEGEDGAVAGGGVSTTGGQQ
QLNGDFRRRRCTSPQSMDTSTAAHGMNPEGEAVDLRDPEAEHQKELDGVYNLYFVNNNWY
FFLRLHQTLCSRLLRVYRQAERQLLEHRAEQNRERLLIGEGRREKANDLAMELRLKQPSE
VELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLVQNIVRQLQYLV
SDEVCLQVTELYLAERKRGAAGGNLSSQCVRAAWEASYQWKAERVMAEENCFKVMFIQNK
GQVTLTIDLLDTEEAQGDDPLDVQNLSNYMEQYIGTESVCSQTDGYYFKPVFLPRNLRHF
RGWQLKQVEAMRCRREWHRKMGVETAGNLDCRFKLNTHKMVFVMNSEDYMYRRGALVKAR
RSQHRVAQTQHEHFEQWHRGWLSEHVSPAAERSVQDWLMGEEDEDMIPCKTTCVSMQIKG
LHVNRYQVHYNSKAPASP
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggctcgcagcagcactgcgaagcaaatcaacccgatccaagacaag
gcctatgtggttcagaagcaagtccagcagcagcactttcagaaactaaagtacttttcg
gtggaggatgccttatcttatttggaccaagtcaaaatacggttcggaaatgatccggga
atatacaataagtttctggatatcatgaaagagtttaagtctcaaagcattgacacacca
ggagttatcaacagagtttctcagctcttccatgggcatcctgaccttgtcctggggttt
aatgcctttttaccgcctggttatcggattgaaattcccaagaatggaatggcatttcta
cagtccccaccgtcctcacagcccacgtggactttctggcagaagacaaaagaagaggcg
gagcaagtctctccagggccaggaaggagcacaggcagctctgtggttagtgcctcttcg
tcagcagtggctgaagcagggtcagctccgaatgaagccgtgacctctccggagagcgtt
gcttcatcatctggacctcctgaacaatcaagcaggttgtcacttcctctacccagccga
gaaagccaatcacagccggccaccacgtcggtatcccctcccacatcagagcccagccct
gtggagtttgacagtgccatcagttacgtcaataagatcaaaaaccgatttttggacaac
ccagaaacctaccgggcctttttggaaattctgcatacataccagaaggagcagctggag
gtgaaggagagcagagggcgtagcactggaggaatgaccgaagatgaggttttctctaaa
gtggcaagccttttcaaaggtcaagaggatctgcttgcagagtttggccagtttttgcct
gacgcaaagagatctctgtttactggaggttctttgcctggaaaagacaatctgaagaaa
gcagaggatgaggaaatgaataaacagagcaagaagaggcctagaccaatgttattgccc
cacatgaccccacttctgaagaaaaaaatgaagtattcctgttccaaggacccatctttt
gcctctgtcggaaagcatggagttttgcgggaattcacattctttgacaaggttcgccgt
ctgctcaagagtcaggaggtgtacgagaatttcttacgctgcatagctctgttcaatcag
gaagtggtttcaggggccgaactcctgcaacttgtgactccattcttggggaagtttcca
gaactgtacacccagtttaagtcatttttgggtgataaagagctgtctcattccatcacg
ggcctctctgaccgctacatggagggtggaggcagagaagtggattacgcctcctgtaaa
cgcctgggttccagctacagagcccttcccaagacctaccagcagcccaaatgcagtggc
cgaactgctatatgcaaagaggtgctgaatgatacatgggtctcattcccttcctggtca
gaagattccacttttgtgagttccaagaaaacaccatatgaagagcagcttcatcgctgt
gaggatgagaggtttgagctggatgttgtgcttgagactaatttggcaacgataagagtt
ttggaaagtgtgcaaaagaaattatcccgcctttcgccggaggatcaagagcgcttccga
ttggatgactgtctgggtggaacttctgaggtcatccagcgtcgagcgatctatcgtatc
tacggcgacaaggctccagagatcatagaggggttgaagaggagtccagccactgcagtt
cctgtcgtactcaaaagattaaaagccaaagaggaggagtggagggaggcccagcagagc
ttcaacaaaatctggagagagcaatatgagaaggcgtatctgaaatcactggaccaccag
ggtgtcaacttcaaacagaacgacatgaaggctcttcgatccaagagtcttctcaatgaa
atagagagcatctatgatgagcggcaggagcagagcacagaagagggcggcatgggccag
caaggtcgtgacggctcgggcacaggatcgaccagcgaaccccacatgatcttcacttac
gaagacaaacagatcctggaggatgccgcctccctcatcatctaccatgtcaagcggcag
cccaccatccacaaggacgacaaggaccacatcaagcgtatcatccagcactttgtcccc
gacctttttttcgcccgtcgtggagagcttagtgagacagaagagttcacggacgaggag
gccgaaggtgaggacggtgctgttgcaggaggcggagtctcaacaacaggcggccagcaa
cagctgaatggtgatttcagacgaagacgatgcacttcccctcagagcatggacacctct
acggccgcccatggcatgaatccagaaggggaggcggtggatctgcgggacccagaagct
gagcaccagaaggagctggatggagtctacaacctgtacttcgtcaataataactggtac
ttcttcctgcggctgcaccagactctgtgctcacggctgctgagggtttacaggcaggcc
gagagacagttactggagcacagggccgagcagaatcgggaaaggctgctcataggagag
gggcgcagagaaaaagcaaacgacctggccatggagctgcgtctaaaacaacccagtgag
gtagagctggaggaatattatccagcgttcttagacatggtacgcagtcttctggatgga
aacctggagtccacgcagtacgaggacaccctgagagagatgttcaccatccatgcttac
atcggatttaccatcgacaagctcgttcagaacatcgtaagacagcttcagtacttggtc
agtgatgaagtgtgtctgcaagtcactgagctgtacctggccgagaggaagaggggtgct
gctggtggaaatctctcatcccagtgtgtccgtgccgcttgggaggccagctaccaatgg
aaagctgagagagtcatggctgaggagaactgcttcaaggtcatgttcattcaaaacaaa
ggtcaggtgaccttaaccattgatttgctggacacggaggaggcccaaggcgatgaccca
ctggatgttcagaatctgtctaattatatggagcagtacataggaactgagtctgtgtgc
tctcagacagacgggtactacttcaagcctgtgtttctacccaggaatttgaggcatttc
cgtggctggcagctcaagcaggtggaagccatgcgctgccggagagagtggcatcggaag
atgggtgtggagacagccgggaacctggactgccgtttcaaactcaacacgcacaagatg
gtgtttgtgatgaactccgaagactacatgtaccgccgaggggccctggtgaaggctcgg
aggtcccagcacagagtagcacagacccagcatgagcactttgagcagtggcacaggggc
tggttgagcgagcacgtgtctcccgccgccgagcgcagcgtgcaggactggctcatggga
gaagaggatgaggacatgatcccctgcaagaccacctgcgtgtccatgcagatcaaaggc
ttacatgtcaacaggtaccaggtgcactacaacagcaaggcccccgcctcaccgtaa
DBGET
integrated database retrieval system
